RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 CLCF1Q9UBD9 225 aa14.59□□□□□ -0.07
LIMS2-217ENST00000545738 H3BNX3 289 aa14.58□□□□□ -0.07
LIMS2-217ENST00000545738 UMPSP11172 480 aa14.58□□□□□ -0.07
LIMS2-217ENST00000545738 SLC7A1P30825 629 aa14.58□□□□□ -0.07
LIMS2-217ENST00000545738 GCKP35557 465 aa14.58□□□□□ -0.07
LIMS2-217ENST00000545738 CA7P43166 264 aa14.58□□□□□ -0.07
LIMS2-217ENST00000545738 SPIBQ01892 262 aa14.58□□□□□ -0.07
LIMS2-217ENST00000545738 ST3GAL3Q11203 375 aa14.58□□□□□ -0.07
LIMS2-217ENST00000545738 LAPTM4AQ15012 233 aa14.58□□□□□ -0.07
LIMS2-217ENST00000545738 PON3Q15166 354 aa14.58□□□□□ -0.07
LIMS2-217ENST00000545738 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.58□□□□□ -0.07
LIMS2-217ENST00000545738 TMEM179BQ7Z7N9 219 aa14.58□□□□□ -0.07
LIMS2-217ENST00000545738 MEIOBQ8N635 442 aa14.58□□□□□ -0.07
LIMS2-217ENST00000545738 ZPLD1Q8TCW7 415 aa14.58□□□□□ -0.07
LIMS2-217ENST00000545738 OSTF1Q92882 214 aa14.58□□□□□ -0.07
LIMS2-217ENST00000545738 DDIT4LQ96D03 193 aa14.58□□□□□ -0.07
LIMS2-217ENST00000545738 DUS3LQ96G46 650 aaKnown RBP14.58□□□□□ -0.07
LIMS2-217ENST00000545738 RSRC1Q96IZ7 334 aaKnown RBP14.58□□□□□ -0.07
LIMS2-217ENST00000545738 RAB3IPQ96QF0 476 aaPredicted RBP14.58□□□□□ -0.07
LIMS2-217ENST00000545738 TMEM43Q9BTV4 400 aa14.58□□□□□ -0.07
LIMS2-217ENST00000545738 LYVE1Q9Y5Y7 322 aa14.58□□□□□ -0.07
LIMS2-217ENST00000545738 TRGV8A0A0C4DH27 118 aa14.58□□□□□ -0.08
LIMS2-217ENST00000545738 A0A1W2PRQ8 180 aa14.58□□□□□ -0.08
LIMS2-217ENST00000545738 LIPT2A6NK58 231 aa14.58□□□□□ -0.08
LIMS2-217ENST00000545738 PRRG2O14669 202 aa14.58□□□□□ -0.08
LIMS2-217ENST00000545738 SMAD9O15198 467 aaKnown RBP14.58□□□□□ -0.08
LIMS2-217ENST00000545738 TIPRLO75663 272 aa14.58□□□□□ -0.08
LIMS2-217ENST00000545738 H1F0P07305 194 aaKnown RBP14.58□□□□□ -0.08
LIMS2-217ENST00000545738 THRBP10828 461 aa14.58□□□□□ -0.08
LIMS2-217ENST00000545738 PLA2G2AP14555 144 aa14.58□□□□□ -0.08
LIMS2-217ENST00000545738 FUT1P19526 365 aa14.58□□□□□ -0.08
LIMS2-217ENST00000545738 CBLP22681 906 aa14.58□□□□□ -0.08
LIMS2-217ENST00000545738 ACVR2AP27037 513 aa14.58□□□□□ -0.08
LIMS2-217ENST00000545738 DGCR6Q14129 220 aa14.58□□□□□ -0.08
LIMS2-217ENST00000545738 ZNF239Q16600 458 aaKnown RBP14.58□□□□□ -0.08
LIMS2-217ENST00000545738 PODNL1Q6PEZ8 512 aa14.58□□□□□ -0.08
LIMS2-217ENST00000545738 PM20D2Q8IYS1 436 aa14.58□□□□□ -0.08
LIMS2-217ENST00000545738 LRRC17Q8N6Y2 441 aa14.58□□□□□ -0.08
LIMS2-217ENST00000545738 C9orf106Q8NAJ2 232 aa14.58□□□□□ -0.08
LIMS2-217ENST00000545738 NAXEQ8NCW5 288 aa14.58□□□□□ -0.08
LIMS2-217ENST00000545738 OR4C15Q8NGM1 316 aa14.58□□□□□ -0.08
LIMS2-217ENST00000545738 PRR7Q8TB68 274 aa14.58□□□□□ -0.08
LIMS2-217ENST00000545738 STK35Q8TDR2 534 aa14.58□□□□□ -0.08
LIMS2-217ENST00000545738 TMEM239Q8WW34 195 aa14.58□□□□□ -0.08
LIMS2-217ENST00000545738 ROBO4Q8WZ75 1007 aa14.58□□□□□ -0.08
LIMS2-217ENST00000545738 MPP4Q96JB8 637 aa14.58□□□□□ -0.08
LIMS2-217ENST00000545738 TRIB1Q96RU8 372 aa14.58□□□□□ -0.08
LIMS2-217ENST00000545738 U3KQV3 271 aa14.58□□□□□ -0.08
LIMS2-217ENST00000545738 INTS1Q8N201 2190 aaKnown RBP14.57□□□□□ -0.08
LIMS2-217ENST00000545738 FZD7O75084 574 aa14.57□□□□□ -0.08
LIMS2-217ENST00000545738 BGLAPP02818 100 aa14.57□□□□□ -0.08
LIMS2-217ENST00000545738 ITGA2P17301 1181 aa14.57□□□□□ -0.08
LIMS2-217ENST00000545738 FPR1P21462 350 aa14.57□□□□□ -0.08
LIMS2-217ENST00000545738 P2RY4P51582 365 aa14.57□□□□□ -0.08
LIMS2-217ENST00000545738 MAP2K6P52564 334 aa14.57□□□□□ -0.08
LIMS2-217ENST00000545738 CARD18P57730 90 aa14.57□□□□□ -0.08
LIMS2-217ENST00000545738 RBPJQ06330 500 aa14.57□□□□□ -0.08
LIMS2-217ENST00000545738 TRAM2Q15035 370 aa14.57□□□□□ -0.08
LIMS2-217ENST00000545738 OR7A5Q15622 319 aa14.57□□□□□ -0.08
LIMS2-217ENST00000545738 SLC46A3Q7Z3Q1 461 aa14.57□□□□□ -0.08
LIMS2-217ENST00000545738 CCDC103Q8IW40 242 aa14.57□□□□□ -0.08
LIMS2-217ENST00000545738 DMRTA2Q96SC8 542 aa14.57□□□□□ -0.08
LIMS2-217ENST00000545738 POTEKPQ9BYX7 375 aa14.57□□□□□ -0.08
LIMS2-217ENST00000545738 NTN4Q9HB63 628 aa14.57□□□□□ -0.08
LIMS2-217ENST00000545738 SELENONQ9NZV5 590 aa14.57□□□□□ -0.08
LIMS2-217ENST00000545738 ING1Q9UK53 422 aaPredicted RBP14.57□□□□□ -0.08
LIMS2-217ENST00000545738 HDGFL3Q9Y3E1 203 aa14.57□□□□□ -0.08
LIMS2-217ENST00000545738 FAM32AQ9Y421 112 aaKnown RBP14.57□□□□□ -0.08
LIMS2-217ENST00000545738 SPIN1Q9Y657 262 aaPredicted RBP14.57□□□□□ -0.08
LIMS2-217ENST00000545738 GCN1Q92616 2671 aaKnown RBP14.57□□□□□ -0.08
LIMS2-217ENST00000545738 NCOA6Q14686 2063 aaPredicted RBP14.57□□□□□ -0.08
LIMS2-217ENST00000545738 ALPK2Q86TB3 2170 aa14.56□□□□□ -0.08
LIMS2-217ENST00000545738 GJE1A6NN92 205 aa14.56□□□□□ -0.08
LIMS2-217ENST00000545738 AHRRA9YTQ3 701 aa14.56□□□□□ -0.08
LIMS2-217ENST00000545738 SULT2B1O00204 365 aa14.56□□□□□ -0.08
LIMS2-217ENST00000545738 WDR1O75083 606 aa14.56□□□□□ -0.08
LIMS2-217ENST00000545738 PMS2P2O95744 297 aa14.56□□□□□ -0.08
LIMS2-217ENST00000545738 RAC3P60763 192 aa14.56□□□□□ -0.08
LIMS2-217ENST00000545738 H3F3AP84243 136 aa14.56□□□□□ -0.08
LIMS2-217ENST00000545738 EXOC3L2Q2M3D2 409 aa14.56□□□□□ -0.08
LIMS2-217ENST00000545738 FGD3Q5JSP0 725 aa14.56□□□□□ -0.08
LIMS2-217ENST00000545738 C1orf185Q5T7R7 199 aa14.56□□□□□ -0.08
LIMS2-217ENST00000545738 OR2T5Q6IEZ7 315 aa14.56□□□□□ -0.08
LIMS2-217ENST00000545738 HMBOX1Q6NT76 420 aa14.56□□□□□ -0.08
LIMS2-217ENST00000545738 TTC33Q6PID6 262 aaPredicted RBP14.56□□□□□ -0.08
LIMS2-217ENST00000545738 CYP4Z1Q86W10 505 aa14.56□□□□□ -0.08
LIMS2-217ENST00000545738 NRMQ8IXM6 262 aa14.56□□□□□ -0.08
LIMS2-217ENST00000545738 OR2T29Q8NH02 315 aa14.56□□□□□ -0.08
LIMS2-217ENST00000545738 ACOT11Q8WXI4 607 aaPredicted RBP14.56□□□□□ -0.08
LIMS2-217ENST00000545738 GPA33Q99795 319 aa14.56□□□□□ -0.08
LIMS2-217ENST00000545738 TTYH2Q9BSA4 534 aa14.56□□□□□ -0.08
LIMS2-217ENST00000545738 TP63Q9H3D4 680 aaPredicted RBP14.56□□□□□ -0.08
LIMS2-217ENST00000545738 ARMC1Q9NVT9 282 aa14.56□□□□□ -0.08
LIMS2-217ENST00000545738 TRAV36DV7A0A075B6V5 113 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 FIGNL2A6NMB9 653 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 ENO4A6NNW6 628 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 AKR7A3O95154 331 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 GADD45GO95257 159 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 CST1P01037 141 aa14.55□□□□□ -0.08
LIMS2-217ENST00000545738 GLI4P10075 376 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms