RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 MVKQ03426 396 aa13.19□□□□□ -0.3
CLSTN3-216ENST00000545663 HEPACAMQ14CZ8 416 aa13.19□□□□□ -0.3
CLSTN3-216ENST00000545663 ZYG11AQ6WRX3 759 aa13.19□□□□□ -0.3
CLSTN3-216ENST00000545663 ATP6V1G3Q96LB4 118 aa13.19□□□□□ -0.3
CLSTN3-216ENST00000545663 AMDHD1Q96NU7 426 aa13.19□□□□□ -0.3
CLSTN3-216ENST00000545663 C1QTNF3Q9BXJ4 246 aa13.19□□□□□ -0.3
CLSTN3-216ENST00000545663 EBPLQ9BY08 206 aa13.19□□□□□ -0.3
CLSTN3-216ENST00000545663 VPS29Q9UBQ0 182 aa13.19□□□□□ -0.3
CLSTN3-216ENST00000545663 OR6C65A6NJZ3 312 aa13.18□□□□□ -0.3
CLSTN3-216ENST00000545663 GPR171O14626 319 aa13.18□□□□□ -0.3
CLSTN3-216ENST00000545663 TYROBPO43914 113 aa13.18□□□□□ -0.3
CLSTN3-216ENST00000545663 RP2O75695 350 aa13.18□□□□□ -0.3
CLSTN3-216ENST00000545663 TSPAN8P19075 237 aa13.18□□□□□ -0.3
CLSTN3-216ENST00000545663 MPGP29372 298 aa13.18□□□□□ -0.3
CLSTN3-216ENST00000545663 PRKAG1P54619 331 aa13.18□□□□□ -0.3
CLSTN3-216ENST00000545663 DNAJB13P59910 316 aa13.18□□□□□ -0.3
CLSTN3-216ENST00000545663 QPRTQ15274 297 aa13.18□□□□□ -0.3
CLSTN3-216ENST00000545663 FAM189A2Q15884 450 aa13.18□□□□□ -0.3
CLSTN3-216ENST00000545663 DUSP5Q16690 384 aa13.18□□□□□ -0.3
CLSTN3-216ENST00000545663 TBRG1Q3YBR2 411 aa13.18□□□□□ -0.3
CLSTN3-216ENST00000545663 TIGD2Q4W5G0 525 aa13.18□□□□□ -0.3
CLSTN3-216ENST00000545663 SLC9B1Q4ZJI4 515 aa13.18□□□□□ -0.3
CLSTN3-216ENST00000545663 SLC25A53Q5H9E4 307 aa13.18□□□□□ -0.3
CLSTN3-216ENST00000545663 KLF17Q5JT82 389 aaPredicted RBP13.18□□□□□ -0.3
CLSTN3-216ENST00000545663 LETMD1Q6P1Q0 360 aa13.18□□□□□ -0.3
CLSTN3-216ENST00000545663 ZNF771Q7L3S4 317 aaPredicted RBP13.18□□□□□ -0.3
CLSTN3-216ENST00000545663 PTGR2Q8N8N7 351 aaPredicted RBP13.18□□□□□ -0.3
CLSTN3-216ENST00000545663 TCP10LQ8TDR4 215 aa13.18□□□□□ -0.3
CLSTN3-216ENST00000545663 HOXB13Q92826 284 aaPredicted RBP13.18□□□□□ -0.3
CLSTN3-216ENST00000545663 TLCD1Q96CP7 247 aa13.18□□□□□ -0.3
CLSTN3-216ENST00000545663 ANKRD27Q96NW4 1050 aa13.18□□□□□ -0.3
CLSTN3-216ENST00000545663 BRF2Q9HAW0 419 aa13.18□□□□□ -0.3
CLSTN3-216ENST00000545663 MED4Q9NPJ6 270 aa13.18□□□□□ -0.3
CLSTN3-216ENST00000545663 GIN1Q9NXP7 522 aa13.18□□□□□ -0.3
CLSTN3-216ENST00000545663 NKIRAS1Q9NYS0 192 aa13.18□□□□□ -0.3
CLSTN3-216ENST00000545663 DNAH3Q8TD57 4116 aa13.17□□□□□ -0.3
CLSTN3-216ENST00000545663 SLC22A31A6NKX4 558 aa13.17□□□□□ -0.3
CLSTN3-216ENST00000545663 VSTM5A8MXK1 200 aa13.17□□□□□ -0.3
CLSTN3-216ENST00000545663 CLDN34H7C241 214 aa13.17□□□□□ -0.3
CLSTN3-216ENST00000545663 NCR1O76036 304 aa13.17□□□□□ -0.3
CLSTN3-216ENST00000545663 IMPDH1P20839 514 aa13.17□□□□□ -0.3
CLSTN3-216ENST00000545663 SERPINB5P36952 375 aa13.17□□□□□ -0.3
CLSTN3-216ENST00000545663 ALDH3B1P43353 468 aa13.17□□□□□ -0.3
CLSTN3-216ENST00000545663 SLC16A1P53985 500 aa13.17□□□□□ -0.3
CLSTN3-216ENST00000545663 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.17□□□□□ -0.3
CLSTN3-216ENST00000545663 ZNF551Q7Z340 670 aaPredicted RBP13.17□□□□□ -0.3
CLSTN3-216ENST00000545663 JAZF1Q86VZ6 243 aa13.17□□□□□ -0.3
CLSTN3-216ENST00000545663 KIRREL3Q8IZU9 778 aa13.17□□□□□ -0.3
CLSTN3-216ENST00000545663 TMEM151AQ8N4L1 468 aa13.17□□□□□ -0.3
CLSTN3-216ENST00000545663 CDC26Q8NHZ8 85 aa13.17□□□□□ -0.3
CLSTN3-216ENST00000545663 PHF21BQ96EK2 531 aa13.17□□□□□ -0.3
CLSTN3-216ENST00000545663 C16orf58Q96GQ5 468 aa13.17□□□□□ -0.3
CLSTN3-216ENST00000545663 APIPQ96GX9 242 aa13.17□□□□□ -0.3
CLSTN3-216ENST00000545663 MRPL37Q9BZE1 423 aaKnown RBP13.17□□□□□ -0.3
CLSTN3-216ENST00000545663 KCNK9Q9NPC2 374 aa13.17□□□□□ -0.3
CLSTN3-216ENST00000545663 CRNNQ9UBG3 495 aaPredicted RBP13.17□□□□□ -0.3
CLSTN3-216ENST00000545663 PCTPQ9UKL6 214 aa13.17□□□□□ -0.3
CLSTN3-216ENST00000545663 NUP50Q9UKX7 468 aa13.17□□□□□ -0.3
CLSTN3-216ENST00000545663 A8MT66 165 aa13.16□□□□□ -0.3
CLSTN3-216ENST00000545663 C3orf80F5H4A9 247 aa13.16□□□□□ -0.3
CLSTN3-216ENST00000545663 BIRC5O15392 142 aa13.16□□□□□ -0.3
CLSTN3-216ENST00000545663 TRIM13O60858 407 aa13.16□□□□□ -0.3
CLSTN3-216ENST00000545663 SPAG7O75391 227 aa13.16□□□□□ -0.3
CLSTN3-216ENST00000545663 SLITRK5O94991 958 aa13.16□□□□□ -0.3
CLSTN3-216ENST00000545663 LGI1O95970 557 aa13.16□□□□□ -0.3
CLSTN3-216ENST00000545663 OTCP00480 354 aa13.16□□□□□ -0.3
CLSTN3-216ENST00000545663 IGLV1-44P01699 117 aa13.16□□□□□ -0.3
CLSTN3-216ENST00000545663 PRPS2P11908 318 aa13.16□□□□□ -0.3
CLSTN3-216ENST00000545663 DDCP20711 480 aa13.16□□□□□ -0.3
CLSTN3-216ENST00000545663 ASMTP46597 345 aa13.16□□□□□ -0.3
CLSTN3-216ENST00000545663 MAGOHP61326 146 aaKnown RBP13.16□□□□□ -0.3
CLSTN3-216ENST00000545663 CSNK2A1P68400 391 aaPredicted RBP13.16□□□□□ -0.3
CLSTN3-216ENST00000545663 LCN2P80188 198 aa13.16□□□□□ -0.3
CLSTN3-216ENST00000545663 RELBQ01201 579 aa13.16□□□□□ -0.3
CLSTN3-216ENST00000545663 C2orf80Q0P641 193 aa13.16□□□□□ -0.3
CLSTN3-216ENST00000545663 MAD2L1BPQ15013 274 aaPredicted RBP13.16□□□□□ -0.3
CLSTN3-216ENST00000545663 KLHL26Q53HC5 615 aa13.16□□□□□ -0.3
CLSTN3-216ENST00000545663 CFAP157Q5JU67 520 aa13.16□□□□□ -0.3
CLSTN3-216ENST00000545663 LIPMQ5VYY2 423 aa13.16□□□□□ -0.3
CLSTN3-216ENST00000545663 SAXO2Q658L1 398 aa13.16□□□□□ -0.3
CLSTN3-216ENST00000545663 C11orf87Q6NUJ2 197 aa13.16□□□□□ -0.3
CLSTN3-216ENST00000545663 C3orf33Q6P1S2 294 aa13.16□□□□□ -0.3
CLSTN3-216ENST00000545663 C16orf87Q6PH81 154 aa13.16□□□□□ -0.3
CLSTN3-216ENST00000545663 OR6Y1Q8NGX8 325 aa13.16□□□□□ -0.3
CLSTN3-216ENST00000545663 MRAPQ8TCY5 172 aa13.16□□□□□ -0.3
CLSTN3-216ENST00000545663 L3HYPDHQ96EM0 354 aa13.16□□□□□ -0.3
CLSTN3-216ENST00000545663 GPA33Q99795 319 aa13.16□□□□□ -0.3
CLSTN3-216ENST00000545663 BEX1Q9HBH7 125 aa13.16□□□□□ -0.3
CLSTN3-216ENST00000545663 OXSMQ9NWU1 459 aa13.16□□□□□ -0.3
CLSTN3-216ENST00000545663 NMRK1Q9NWW6 199 aa13.16□□□□□ -0.3
CLSTN3-216ENST00000545663 EMCNQ9ULC0 261 aa13.16□□□□□ -0.3
CLSTN3-216ENST00000545663 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.15□□□□□ -0.3
CLSTN3-216ENST00000545663 A0A096LPE4 126 aa13.15□□□□□ -0.3
CLSTN3-216ENST00000545663 IGHV2OR16-5A0A0B4J2B6 119 aa13.15□□□□□ -0.3
CLSTN3-216ENST00000545663 A0A1W2PPZ6 126 aa13.15□□□□□ -0.3
CLSTN3-216ENST00000545663 TTC36A6NLP5 189 aa13.15□□□□□ -0.3
CLSTN3-216ENST00000545663 GTPBP1O00178 669 aaKnown RBP13.15□□□□□ -0.3
CLSTN3-216ENST00000545663 PIP5K1BO14986 540 aa13.15□□□□□ -0.3
CLSTN3-216ENST00000545663 SYNGR3O43761 229 aa13.15□□□□□ -0.3
CLSTN3-216ENST00000545663 CDC14BO60729 498 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms