RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-223	ENST00000544669	TMEM14A	Q9Y6G1	99 aa		11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	C2orf16	Q68DN1	1984 aa		11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	SPTY2D1-AS1	A0A0U1RR47	76 aa		11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	ZC3H12D	A2A288	527 aa	Known RBP	11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	SYNDIG1L	A6NDD5	238 aa		11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	DNAJB6	O75190	326 aa		11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	IGLV3-19	P01714	112 aa		11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	CALCB	P10092	127 aa		11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	HPGD	P15428	266 aa		11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	HIST1H1C	P16403	213 aa	Known RBP	11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	C19orf57	Q0VDD7	668 aa		11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	FUT7	Q11130	342 aa		11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	HYAL1	Q12794	435 aa		11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	CCIN	Q13939	588 aa		11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	KIAA0895L	Q68EN5	471 aa		11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	LRRN1	Q6UXK5	716 aa		11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	BTN2A1	Q7KYR7	527 aa		11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	JAZF1	Q86VZ6	243 aa		11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	CYB561A3	Q8NBI2	242 aa		11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	OR5J2	Q8NH18	312 aa		11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	OR4K13	Q8NH42	304 aa		11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	RPLP0P6	Q8NHW5	317 aa		11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	SLC37A2	Q8TED4	501 aa		11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	SMIM4	Q8WVI0	70 aa		11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	PTCHD1	Q96NR3	888 aa		11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	ABHD1	Q96SE0	405 aa		11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	RPP25	Q9BUL9	199 aa	Known RBP	11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	CACNG6	Q9BXT2	260 aa		11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	NMNAT2	Q9BZQ4	307 aa		11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	CHRNA10	Q9GZZ6	450 aa		11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	S1PR5	Q9H228	398 aa		11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	UBQLN4	Q9NRR5	601 aa		11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	MMP17	Q9ULZ9	603 aa		11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	ETV7	Q9Y603	341 aa		11.97	□□□□□ -0.49
CPSF7-223	ENST00000544669	TEX13C	A0A0J9YWL9	993 aa		11.96	□□□□□ -0.49
CPSF7-223	ENST00000544669	ELOA3D	A6NLF2	546 aa	Predicted RBP	11.96	□□□□□ -0.49
CPSF7-223	ENST00000544669		H0YIG0	161 aa		11.96	□□□□□ -0.49
CPSF7-223	ENST00000544669	RAF1	P04049	648 aa		11.96	□□□□□ -0.49
CPSF7-223	ENST00000544669	PVR	P15151	417 aa		11.96	□□□□□ -0.49
CPSF7-223	ENST00000544669	IL9	P15248	144 aa		11.96	□□□□□ -0.49
CPSF7-223	ENST00000544669	SRM	P19623	302 aa		11.96	□□□□□ -0.49
CPSF7-223	ENST00000544669	SLC6A8	P48029	635 aa		11.96	□□□□□ -0.49
CPSF7-223	ENST00000544669	LSS	P48449	732 aa		11.96	□□□□□ -0.49
CPSF7-223	ENST00000544669	RPS4X	P62701	263 aa	Known RBP	11.96	□□□□□ -0.49
CPSF7-223	ENST00000544669	HTR4	Q13639	388 aa		11.96	□□□□□ -0.49
CPSF7-223	ENST00000544669	FHL1	Q13642	323 aa		11.96	□□□□□ -0.49
CPSF7-223	ENST00000544669	ELOA3B	Q3SY89	546 aa		11.96	□□□□□ -0.49
CPSF7-223	ENST00000544669	SLC16A9	Q7RTY1	509 aa		11.96	□□□□□ -0.49
CPSF7-223	ENST00000544669	PRSS41	Q7RTY9	318 aa		11.96	□□□□□ -0.49
CPSF7-223	ENST00000544669	FAM109A	Q8N4B1	249 aa		11.96	□□□□□ -0.49
CPSF7-223	ENST00000544669	RCBTB1	Q8NDN9	531 aa		11.96	□□□□□ -0.49
CPSF7-223	ENST00000544669	C17orf47	Q8NEP4	570 aa		11.96	□□□□□ -0.49
CPSF7-223	ENST00000544669	ELOA3	Q8NG57	546 aa		11.96	□□□□□ -0.49
CPSF7-223	ENST00000544669	OR9A4	Q8NGU2	314 aa		11.96	□□□□□ -0.49
CPSF7-223	ENST00000544669	RPS4Y2	Q8TD47	263 aa		11.96	□□□□□ -0.49
CPSF7-223	ENST00000544669	YIPF5	Q969M3	257 aa		11.96	□□□□□ -0.49
CPSF7-223	ENST00000544669	S100A16	Q96FQ6	103 aa	Known RBP	11.96	□□□□□ -0.49
CPSF7-223	ENST00000544669	HSPA12B	Q96MM6	686 aa		11.96	□□□□□ -0.49
CPSF7-223	ENST00000544669	GFM1	Q96RP9	751 aa	Known RBP	11.96	□□□□□ -0.49
CPSF7-223	ENST00000544669	OR51J1	Q9H342	316 aa		11.96	□□□□□ -0.49
CPSF7-223	ENST00000544669	GHITM	Q9H3K2	345 aa		11.96	□□□□□ -0.49
CPSF7-223	ENST00000544669	RXFP3	Q9NSD7	469 aa		11.96	□□□□□ -0.49
CPSF7-223	ENST00000544669	EVA1B	Q9NVM1	165 aa		11.96	□□□□□ -0.49
CPSF7-223	ENST00000544669	NCDN	Q9UBB6	729 aa		11.96	□□□□□ -0.49
CPSF7-223	ENST00000544669	GNG8	Q9UK08	70 aa		11.96	□□□□□ -0.49
CPSF7-223	ENST00000544669	YBX2	Q9Y2T7	364 aa	Known RBP	11.96	□□□□□ -0.49
CPSF7-223	ENST00000544669	PIAS3	Q9Y6X2	628 aa		11.96	□□□□□ -0.49
CPSF7-223	ENST00000544669		A0A0A6YYJ9	748 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669		A0A1W2PRG6	482 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	C10orf142	B7Z368	130 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	AIP	O00170	330 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	CPNE3	O75131	537 aa	Known RBP	11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	H2AFB2	P0C5Z0	115 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	UBL4A	P11441	157 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	ZNF24	P17028	368 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	SPI1	P17947	270 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	MNDA	P41218	407 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	GPR3	P46089	330 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	BLVRA	P53004	296 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	ZNF267	Q14586	743 aa	Predicted RBP	11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	BTBD16	Q32M84	506 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	SLC36A2	Q495M3	483 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	TP53I3	Q53FA7	332 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	C6orf183	Q5T699	404 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	GPR139	Q6DWJ6	353 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	KIRREL2	Q6UWL6	708 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	MED25	Q71SY5	747 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	ARHGEF39	Q8N4T4	335 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	NPEPL1	Q8NDH3	523 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	SDR9C7	Q8NEX9	313 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	OR13H1	Q8NG92	308 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	ZDHHC1	Q8WTX9	485 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	NSMAF	Q92636	917 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	PHF21A	Q96BD5	680 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	ZMYND19	Q96E35	227 aa	Predicted RBP	11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	BEX2	Q9BXY8	128 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	OR10A5	Q9H207	317 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	PPIL3	Q9H2H8	161 aa	Known RBP	11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	B3GNT2	Q9NY97	397 aa		11.95	□□□□□ -0.5
CPSF7-223	ENST00000544669	PLCL2	Q9UPR0	1127 aa		11.95	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms