RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	SEC22A	Q96IW7	307 aa		2.74	□□□□□ -1.97
RAP1B-231	ENST00000544639	TTC25	Q96NG3	672 aa		2.74	□□□□□ -1.97
RAP1B-231	ENST00000544639	C20orf85	Q9H1P6	137 aa		2.74	□□□□□ -1.97
RAP1B-231	ENST00000544639	SUDS3	Q9H7L9	328 aa	Predicted RBP	2.74	□□□□□ -1.97
RAP1B-231	ENST00000544639	FOLH1B	Q9HBA9	442 aa		2.74	□□□□□ -1.97
RAP1B-231	ENST00000544639	PLGRKT	Q9HBL7	147 aa		2.74	□□□□□ -1.97
RAP1B-231	ENST00000544639	ZNF331	Q9NQX6	463 aa	Predicted RBP	2.74	□□□□□ -1.97
RAP1B-231	ENST00000544639	SMOX	Q9NWM0	555 aa		2.74	□□□□□ -1.97
RAP1B-231	ENST00000544639	SMPD3	Q9NY59	655 aa	Predicted RBP	2.74	□□□□□ -1.97
RAP1B-231	ENST00000544639	MTRF1L	Q9UGC7	380 aa	Known RBP	2.74	□□□□□ -1.97
RAP1B-231	ENST00000544639	STAP1	Q9ULZ2	295 aa		2.74	□□□□□ -1.97
RAP1B-231	ENST00000544639	COPS3	Q9UNS2	423 aa		2.74	□□□□□ -1.97
RAP1B-231	ENST00000544639	FRMPD3	Q5JV73	1810 aa		2.74	□□□□□ -1.97
RAP1B-231	ENST00000544639		E9PBE3	544 aa		2.73	□□□□□ -1.97
RAP1B-231	ENST00000544639	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	2.73	□□□□□ -1.97
RAP1B-231	ENST00000544639	MAGEB3	O15480	346 aa		2.73	□□□□□ -1.97
RAP1B-231	ENST00000544639	AP2A1	O95782	977 aa		2.73	□□□□□ -1.97
RAP1B-231	ENST00000544639		P04436	131 aa		2.73	□□□□□ -1.97
RAP1B-231	ENST00000544639	IGHV4-34	P06331	123 aa		2.73	□□□□□ -1.97
RAP1B-231	ENST00000544639	PSG2	P11465	335 aa		2.73	□□□□□ -1.97
RAP1B-231	ENST00000544639	GCA	P28676	217 aa		2.73	□□□□□ -1.97
RAP1B-231	ENST00000544639	RFC4	P35249	363 aa		2.73	□□□□□ -1.97
RAP1B-231	ENST00000544639	NUDT1	P36639	197 aa		2.73	□□□□□ -1.97
RAP1B-231	ENST00000544639	KIR2DS4	P43632	304 aa		2.73	□□□□□ -1.97
RAP1B-231	ENST00000544639	CASP4	P49662	377 aa		2.73	□□□□□ -1.97
RAP1B-231	ENST00000544639	KPNA2	P52292	529 aa	Known RBP	2.73	□□□□□ -1.97
RAP1B-231	ENST00000544639	EFNB2	P52799	333 aa		2.73	□□□□□ -1.97
RAP1B-231	ENST00000544639	TGFBR3	Q03167	851 aa		2.73	□□□□□ -1.97
RAP1B-231	ENST00000544639	TAF7	Q15545	349 aa	Predicted RBP	2.73	□□□□□ -1.97
RAP1B-231	ENST00000544639	BCL7A	Q4VC05	210 aa		2.73	□□□□□ -1.97
RAP1B-231	ENST00000544639	C1orf220	Q5T0J3	134 aa		2.73	□□□□□ -1.97
RAP1B-231	ENST00000544639	OR2G6	Q5TZ20	316 aa		2.73	□□□□□ -1.97
RAP1B-231	ENST00000544639	PNKD	Q8N490	385 aa		2.73	□□□□□ -1.97
RAP1B-231	ENST00000544639	OR10G3	Q8NGC4	313 aa		2.73	□□□□□ -1.97
RAP1B-231	ENST00000544639	OR4K14	Q8NGD5	310 aa		2.73	□□□□□ -1.97
RAP1B-231	ENST00000544639	EFHD2	Q96C19	240 aa	Predicted RBP	2.73	□□□□□ -1.97
RAP1B-231	ENST00000544639	PAGE5	Q96GU1	130 aa		2.73	□□□□□ -1.97
RAP1B-231	ENST00000544639	ZSCAN5A	Q9BUG6	496 aa		2.73	□□□□□ -1.97
RAP1B-231	ENST00000544639	RAB34	Q9BZG1	259 aa		2.73	□□□□□ -1.97
RAP1B-231	ENST00000544639	ZNF225	Q9UK10	706 aa		2.73	□□□□□ -1.97
RAP1B-231	ENST00000544639	PRPF19	Q9UMS4	504 aa	Known RBP	2.73	□□□□□ -1.97
RAP1B-231	ENST00000544639	PRG3	Q9Y2Y8	225 aa	Predicted RBP	2.73	□□□□□ -1.97
RAP1B-231	ENST00000544639	DDX49	Q9Y6V7	483 aa	Known RBP	2.73	□□□□□ -1.97
RAP1B-231	ENST00000544639		A0A1B0GUA9	196 aa		2.72	□□□□□ -1.97
RAP1B-231	ENST00000544639	GJE1	A6NN92	205 aa		2.72	□□□□□ -1.97
RAP1B-231	ENST00000544639	HIP1	O00291	1037 aa		2.72	□□□□□ -1.97
RAP1B-231	ENST00000544639	RGS16	O15492	202 aa	Predicted RBP	2.72	□□□□□ -1.97
RAP1B-231	ENST00000544639	MBTPS2	O43462	519 aa		2.72	□□□□□ -1.97
RAP1B-231	ENST00000544639	FAM189A1	O60320	539 aa		2.72	□□□□□ -1.97
RAP1B-231	ENST00000544639	CXCR2	P25025	360 aa		2.72	□□□□□ -1.97
RAP1B-231	ENST00000544639	PKNOX1	P55347	436 aa		2.72	□□□□□ -1.97
RAP1B-231	ENST00000544639	TAS2R19	P59542	299 aa		2.72	□□□□□ -1.97
RAP1B-231	ENST00000544639	ASPH	Q12797	758 aa		2.72	□□□□□ -1.97
RAP1B-231	ENST00000544639	UNC119	Q13432	240 aa		2.72	□□□□□ -1.97
RAP1B-231	ENST00000544639	PARP15	Q460N3	678 aa		2.72	□□□□□ -1.97
RAP1B-231	ENST00000544639	ATAD3B	Q5T9A4	648 aa		2.72	□□□□□ -1.97
RAP1B-231	ENST00000544639	GALNT17	Q6IS24	598 aa		2.72	□□□□□ -1.97
RAP1B-231	ENST00000544639	TMIGD1	Q6UXZ0	262 aa		2.72	□□□□□ -1.97
RAP1B-231	ENST00000544639	NLRP9	Q7RTR0	991 aa		2.72	□□□□□ -1.97
RAP1B-231	ENST00000544639	CCDC50	Q8IVM0	306 aa		2.72	□□□□□ -1.97
RAP1B-231	ENST00000544639	FAM71E2	Q8N5Q1	922 aa		2.72	□□□□□ -1.97
RAP1B-231	ENST00000544639	FGF11	Q92914	225 aa		2.72	□□□□□ -1.97
RAP1B-231	ENST00000544639	KCNA7	Q96RP8	456 aa		2.72	□□□□□ -1.97
RAP1B-231	ENST00000544639	SDHC	Q99643	169 aa	Predicted RBP	2.72	□□□□□ -1.97
RAP1B-231	ENST00000544639	P2RY13	Q9BPV8	354 aa		2.72	□□□□□ -1.97
RAP1B-231	ENST00000544639	NRIP2	Q9BQI9	281 aa		2.72	□□□□□ -1.97
RAP1B-231	ENST00000544639	CHRDL1	Q9BU40	450 aa		2.72	□□□□□ -1.97
RAP1B-231	ENST00000544639	PLEKHH1	Q9ULM0	1364 aa		2.72	□□□□□ -1.97
RAP1B-231	ENST00000544639	PRKAB2	O43741	272 aa		2.71	□□□□□ -1.98
RAP1B-231	ENST00000544639	GMFG	O60234	142 aa		2.71	□□□□□ -1.98
RAP1B-231	ENST00000544639	UGT1A9	O60656	530 aa		2.71	□□□□□ -1.98
RAP1B-231	ENST00000544639	CA11	O75493	328 aa		2.71	□□□□□ -1.98
RAP1B-231	ENST00000544639	RHOBTB1	O94844	696 aa		2.71	□□□□□ -1.98
RAP1B-231	ENST00000544639	DIRAS1	O95057	198 aa		2.71	□□□□□ -1.98
RAP1B-231	ENST00000544639	KLF8	O95600	359 aa	Predicted RBP	2.71	□□□□□ -1.98
RAP1B-231	ENST00000544639	HOXC4	P09017	264 aa	Predicted RBP	2.71	□□□□□ -1.98
RAP1B-231	ENST00000544639	CHTF8	P0CG12	524 aa		2.71	□□□□□ -1.98
RAP1B-231	ENST00000544639	HSMCR30	P0CW71	290 aa		2.71	□□□□□ -1.98
RAP1B-231	ENST00000544639	ZNF44	P15621	663 aa		2.71	□□□□□ -1.98
RAP1B-231	ENST00000544639	RCC1	P18754	421 aa	Predicted RBP	2.71	□□□□□ -1.98
RAP1B-231	ENST00000544639	QARS	P47897	775 aa	Known RBP	2.71	□□□□□ -1.98
RAP1B-231	ENST00000544639	UCN	P55089	124 aa		2.71	□□□□□ -1.98
RAP1B-231	ENST00000544639	DLX1	P56177	255 aa		2.71	□□□□□ -1.98
RAP1B-231	ENST00000544639	TNFRSF17	Q02223	184 aa		2.71	□□□□□ -1.98
RAP1B-231	ENST00000544639	MECOM	Q03112	1051 aa		2.71	□□□□□ -1.98
RAP1B-231	ENST00000544639	KLRB1	Q12918	225 aa		2.71	□□□□□ -1.98
RAP1B-231	ENST00000544639	VGLL4	Q14135	290 aa		2.71	□□□□□ -1.98
RAP1B-231	ENST00000544639	SLC15A2	Q16348	729 aa		2.71	□□□□□ -1.98
RAP1B-231	ENST00000544639	NRF1	Q16656	503 aa		2.71	□□□□□ -1.98
RAP1B-231	ENST00000544639	CCDC152	Q4G0S7	254 aa		2.71	□□□□□ -1.98
RAP1B-231	ENST00000544639	CARD16	Q5EG05	197 aa		2.71	□□□□□ -1.98
RAP1B-231	ENST00000544639	CFAP157	Q5JU67	520 aa		2.71	□□□□□ -1.98
RAP1B-231	ENST00000544639	SAMD4B	Q5PRF9	694 aa	Known RBP	2.71	□□□□□ -1.98
RAP1B-231	ENST00000544639	TIGD3	Q6B0B8	471 aa		2.71	□□□□□ -1.98
RAP1B-231	ENST00000544639	OR52E8	Q6IFG1	317 aa		2.71	□□□□□ -1.98
RAP1B-231	ENST00000544639	ACP7	Q6ZNF0	438 aa		2.71	□□□□□ -1.98
RAP1B-231	ENST00000544639	RALGPS2	Q86X27	583 aa	Predicted RBP	2.71	□□□□□ -1.98
RAP1B-231	ENST00000544639	VSTM4	Q8IW00	320 aa		2.71	□□□□□ -1.98
RAP1B-231	ENST00000544639	ZNF540	Q8NDQ6	660 aa		2.71	□□□□□ -1.98
RAP1B-231	ENST00000544639	STEAP2	Q8NFT2	490 aa		2.71	□□□□□ -1.98

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms