RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 C3orf33Q6P1S2 294 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 C1orf94Q6P1W5 598 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 IZUMO2Q6UXV1 221 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 TMPRSS11FQ6ZWK6 438 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 GALNTL5Q7Z4T8 443 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 TMEM179BQ7Z7N9 219 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 TSPYL5Q86VY4 417 aaPredicted RBP8.61□□□□□ -1.03
YBX3-215ENST00000544504 NKAIN4Q8IVV8 208 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 SULF2Q8IWU5 870 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 PARP8Q8N3A8 854 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 GTPBP8Q8N3Z3 284 aaPredicted RBP8.61□□□□□ -1.03
YBX3-215ENST00000544504 GALNT4Q8N4A0 578 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 TMEM255BQ8WV15 326 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 PIGQQ9BRB3 760 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 TEX12Q9BXU0 123 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 UCK2Q9BZX2 261 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 OR2B2Q9GZK3 357 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 KLHL1Q9NR64 748 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 CHRNA9Q9UGM1 479 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 VDAC3Q9Y277 283 aa8.61□□□□□ -1.03
YBX3-215ENST00000544504 FBN3Q75N90 2809 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 TRAV36DV7A0A075B6V5 113 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 LRRC3CA6NJW4 275 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 G3V3Y1 287 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 H0YAE9 185 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 GMFGO60234 142 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 SUSD5O60279 629 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 F10P00742 488 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 MT-ATP6P00846 226 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 THY1P04216 161 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 IFI30P13284 250 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 PRKACGP22612 351 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 MST1P26927 711 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 GSSP48637 474 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 SLC9A3P48764 834 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 MEOX1P50221 254 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 GPR85P60893 370 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 FOXO1Q12778 655 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 FOXF1Q12946 379 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 ZNF169Q14929 603 aaPredicted RBP8.6□□□□□ -1.03
YBX3-215ENST00000544504 SEC23BQ15437 767 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 TOMM34Q15785 309 aaPredicted RBP8.6□□□□□ -1.03
YBX3-215ENST00000544504 TTC23Q5W5X9 447 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 RPUSD3Q6P087 351 aaKnown RBP8.6□□□□□ -1.03
YBX3-215ENST00000544504 PGBD2Q6P3X8 592 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 ARSKQ6UWY0 536 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 NRMQ8IXM6 262 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 DHRSXQ8N5I4 330 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 CLDN22Q8N7P3 220 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 ZFP62Q8NB50 900 aaPredicted RBP8.6□□□□□ -1.03
YBX3-215ENST00000544504 ZNF555Q8NEP9 628 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 OR9Q2Q8NGE9 314 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 OR14L1PQ8NHC6 308 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 BPIFA2Q96DR5 249 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 SGTBQ96EQ0 304 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 GNRHR2Q96P88 292 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 SLC29A1Q99808 456 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 TACO1Q9BSH4 297 aaKnown RBP8.6□□□□□ -1.03
YBX3-215ENST00000544504 POTEKPQ9BYX7 375 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 UBQLN3Q9H347 655 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 SMURF2Q9HAU4 748 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 DEPPQ9NTK1 212 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 FBXL2Q9UKC9 423 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 DCHS2Q6V1P9 2916 aa8.6□□□□□ -1.03
YBX3-215ENST00000544504 HEATR5AQ86XA9 2040 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 CNTRLQ7Z7A1 2325 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 EFCAB9A8MZ26 197 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 HCN1O60741 890 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 TRAPPC6AO75865 159 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 GLSO94925 669 aaPredicted RBP8.59□□□□□ -1.03
YBX3-215ENST00000544504 RCBTB2O95199 551 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 GASTP01350 101 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 HIST1H2ABP04908 130 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 HPNP05981 417 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 SAGP10523 405 aaPredicted RBP8.59□□□□□ -1.03
YBX3-215ENST00000544504 OSMP13725 252 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 CHMP24386 653 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 OMPP47874 163 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 ST13P50502 369 aaKnown RBP8.59□□□□□ -1.03
YBX3-215ENST00000544504 DAPP51397 102 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 NUP107P57740 925 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 PPIAP62937 165 aaKnown RBP8.59□□□□□ -1.03
YBX3-215ENST00000544504 IL1RL1Q01638 556 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 ALDH6A1Q02252 535 aaKnown RBP8.59□□□□□ -1.03
YBX3-215ENST00000544504 CRYZQ08257 329 aaKnown RBP8.59□□□□□ -1.03
YBX3-215ENST00000544504 FOXD4Q12950 439 aaPredicted RBP8.59□□□□□ -1.03
YBX3-215ENST00000544504 LAPTM4AQ15012 233 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 TMEM44Q2T9K0 475 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 PRR30Q53SZ7 412 aaPredicted RBP8.59□□□□□ -1.03
YBX3-215ENST00000544504 PDSS1Q5T2R2 415 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 FAM69AQ5T7M9 428 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 RAET1LQ5VY80 246 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 TBPL2Q6SJ96 375 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 WDR88Q6ZMY6 472 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 Q6ZS92 163 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 RASSF6Q6ZTQ3 369 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 HIST3H2AQ7L7L0 130 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 ZER1Q7Z7L7 766 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 ADGRG3Q86Y34 549 aa8.59□□□□□ -1.03
YBX3-215ENST00000544504 HS3ST5Q8IZT8 346 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms