RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-223	ENST00000544268	WDR5B	Q86VZ2	330 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	PFN4	Q8NHR9	129 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	SFXN5	Q8TD22	340 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	OR2A5	Q96R48	311 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	TBX5	Q99593	518 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	SPATA5L1	Q9BVQ7	753 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	ADAP2	Q9NPF8	381 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	C20orf141	Q9NUB4	165 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	KCNE5	Q9UJ90	142 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	SLC13A4	Q9UKG4	626 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	PILRA	Q9UKJ1	303 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	COPS3	Q9UNS2	423 aa		13.82	□□□□□ -0.2
CHFR-223	ENST00000544268	PI4KA	P42356	2102 aa		13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	C2orf92	A0A1B0GVN3	265 aa		13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	CASC3	O15234	703 aa	Known RBP	13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	PRODH	O43272	600 aa		13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	HPGDS	O60760	199 aa		13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	SSTR2	P30874	369 aa		13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	RFX3	P48380	749 aa		13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	TSPAN31	Q12999	210 aa		13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	CAMK2D	Q13557	499 aa		13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	BCL2L15	Q5TBC7	163 aa		13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	LRFN4	Q6PJG9	635 aa		13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	RRM2B	Q7LG56	351 aa		13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	SLC41A3	Q96GZ6	507 aa		13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	SAMD8	Q96LT4	415 aa		13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	HCAR1	Q9BXC0	346 aa		13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	ACTRT3	Q9BYD9	372 aa		13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	ISG20L2	Q9H9L3	353 aa	Known RBP	13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	MED9	Q9NWA0	146 aa		13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	BAIAP2	Q9UQB8	552 aa		13.81	□□□□□ -0.2
CHFR-223	ENST00000544268		A0A0J9YY10	115 aa		13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	SELL	P14151	372 aa		13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	CDH11	P55287	796 aa		13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	FXYD6P3	P58550	94 aa		13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	FLI1	Q01543	452 aa	Predicted RBP	13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	GPR176	Q14439	515 aa		13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	TRAM2	Q15035	370 aa		13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	HSD17B12	Q53GQ0	312 aa		13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	PMS2CL	Q68D20	193 aa		13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	BHLHB9	Q6PI77	547 aa		13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	ASPG	Q86U10	573 aa		13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	LAPTM4B	Q86VI4	370 aa		13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	SIRT6	Q8N6T7	355 aa		13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	BAHD1	Q8TBE0	780 aa	Predicted RBP	13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	GNPDA2	Q8TDQ7	276 aa		13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	DPH1	Q9BZG8	443 aa		13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	SDHAF3	Q9NRP4	125 aa		13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	ZNF443	Q9Y2A4	671 aa	Predicted RBP	13.81	□□□□□ -0.2
CHFR-223	ENST00000544268	TMEM131	Q92545	1883 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268		A0A1B0GVI7	797 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	SURF4	O15260	269 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	ZGLP1	P0C6A0	271 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	HTR2A	P28223	471 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	SCRN3	Q0VDG4	424 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	ZNF155	Q12901	538 aa	Predicted RBP	13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	EXOSC7	Q15024	291 aa	Known RBP	13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	ARMC6	Q6NXE6	501 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	FIGNL1	Q6PIW4	674 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	CHMP1B	Q7LBR1	199 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	ZAR1	Q86SH2	424 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	C17orf82	Q86X59	251 aa	Predicted RBP	13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	C1orf210	Q8IVY1	113 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	ZNF485	Q8NCK3	441 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	OR8K3	Q8NH51	312 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	ZNF649	Q9BS31	505 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	RBCK1	Q9BYM8	510 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	HINT3	Q9NQE9	182 aa	Known RBP	13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	POMT2	Q9UKY4	750 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	WDR45	Q9Y484	360 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	SLC22A23	A1A5C7	686 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	CD8B2	A6NJW9	211 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	PRSS44	E7EML9	344 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	CD8B	P10966	210 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	CEL	P19835	753 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	SLC1A3	P43003	542 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	ST3GAL3	Q11203	375 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	ZNF169	Q14929	603 aa	Predicted RBP	13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	CEBPE	Q15744	281 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	PLK5	Q496M5	336 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	C3orf38	Q5JPI3	329 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	OGFOD3	Q6PK18	319 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	CCDC36	Q8IYA8	594 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	LRRC25	Q8N386	305 aa	Predicted RBP	13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	POGLUT1	Q8NBL1	392 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	OR2T4	Q8NH00	348 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	ST8SIA2	Q92186	375 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	TM4SF19	Q96DZ7	209 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	OR2M2	Q96R28	347 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	SLC38A3	Q99624	504 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	DPYSL5	Q9BPU6	564 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	ZFYVE21	Q9BQ24	234 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	SEC22C	Q9BRL7	303 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	OR51J1	Q9H342	316 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	CYB5R1	Q9UHQ9	305 aa		13.8	□□□□□ -0.2
CHFR-223	ENST00000544268	WDR87	Q6ZQQ6	2873 aa		13.79	□□□□□ -0.2
CHFR-223	ENST00000544268	ARID1B	Q8NFD5	2236 aa	Predicted RBP	13.79	□□□□□ -0.2
CHFR-223	ENST00000544268	OR2W5	A6NFC9	320 aa		13.79	□□□□□ -0.2
CHFR-223	ENST00000544268	NUPL2	O15504	423 aa	Known RBP	13.79	□□□□□ -0.2
CHFR-223	ENST00000544268	LDOC1	O95751	146 aa	Predicted RBP	13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms