RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 RACGAP1Q9H0H5 632 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 PARD6AQ9NPB6 346 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 EXOSC4Q9NPD3 245 aaKnown RBP12.44□□□□□ -0.42
HCFC2-202ENST00000544223 FBXO8Q9NRD0 319 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 KLRF1Q9NZS2 232 aa12.44□□□□□ -0.42
HCFC2-202ENST00000544223 DOCK10Q96BY6 2186 aa12.43□□□□□ -0.42
HCFC2-202ENST00000544223 J3QRK9 145 aa12.43□□□□□ -0.42
HCFC2-202ENST00000544223 MYL12BO14950 172 aa12.43□□□□□ -0.42
HCFC2-202ENST00000544223 GPX5O75715 221 aa12.43□□□□□ -0.42
HCFC2-202ENST00000544223 GPANK1O95872 356 aa12.43□□□□□ -0.42
HCFC2-202ENST00000544223 GUSBP08236 651 aa12.43□□□□□ -0.42
HCFC2-202ENST00000544223 F8A1P23610 371 aa12.43□□□□□ -0.42
HCFC2-202ENST00000544223 GRPRP30550 384 aa12.43□□□□□ -0.42
HCFC2-202ENST00000544223 NIPAL3Q6P499 406 aa12.43□□□□□ -0.42
HCFC2-202ENST00000544223 RTL4Q6ZR62 310 aa12.43□□□□□ -0.42
HCFC2-202ENST00000544223 ATCAYQ86WG3 371 aa12.43□□□□□ -0.42
HCFC2-202ENST00000544223 NLGN4YQ8NFZ3 816 aaPredicted RBP12.43□□□□□ -0.42
HCFC2-202ENST00000544223 Q96M85 177 aa12.43□□□□□ -0.42
HCFC2-202ENST00000544223 DCLRE1CQ96SD1 692 aaKnown RBP12.43□□□□□ -0.42
HCFC2-202ENST00000544223 SMAD5Q99717 465 aaKnown RBP12.43□□□□□ -0.42
HCFC2-202ENST00000544223 TM9SF2Q99805 663 aa12.43□□□□□ -0.42
HCFC2-202ENST00000544223 LAT2Q9GZY6 243 aa12.43□□□□□ -0.42
HCFC2-202ENST00000544223 NANSQ9NR45 359 aa12.43□□□□□ -0.42
HCFC2-202ENST00000544223 H2AFY2Q9P0M6 372 aaPredicted RBP12.43□□□□□ -0.42
HCFC2-202ENST00000544223 MED13Q9UHV7 2174 aa12.43□□□□□ -0.42
HCFC2-202ENST00000544223 TRIM64BA6NI03 449 aa12.43□□□□□ -0.42
HCFC2-202ENST00000544223 OR6C70A6NIJ9 312 aa12.43□□□□□ -0.42
HCFC2-202ENST00000544223 OR6C76A6NM76 312 aa12.43□□□□□ -0.42
HCFC2-202ENST00000544223 C9orf172C9J069 976 aa12.43□□□□□ -0.42
HCFC2-202ENST00000544223 PLD2O14939 933 aa12.43□□□□□ -0.42
HCFC2-202ENST00000544223 GP1BAP07359 652 aa12.43□□□□□ -0.42
HCFC2-202ENST00000544223 COX6A1P12074 109 aa12.43□□□□□ -0.42
HCFC2-202ENST00000544223 PIPP12273 146 aaPredicted RBP12.43□□□□□ -0.42
HCFC2-202ENST00000544223 CXCR1P25024 350 aa12.43□□□□□ -0.42
HCFC2-202ENST00000544223 ADH7P40394 386 aa12.43□□□□□ -0.42
HCFC2-202ENST00000544223 RBM34P42696 430 aaKnown RBP12.43□□□□□ -0.42
HCFC2-202ENST00000544223 ZNF74Q16587 644 aa12.43□□□□□ -0.42
HCFC2-202ENST00000544223 ISXQ2M1V0 245 aa12.43□□□□□ -0.42
HCFC2-202ENST00000544223 DCAF12Q5T6F0 453 aa12.43□□□□□ -0.42
HCFC2-202ENST00000544223 MEDAGQ5VYS4 303 aa12.43□□□□□ -0.42
HCFC2-202ENST00000544223 CYP4Z2PQ8N1L4 340 aa12.43□□□□□ -0.42
HCFC2-202ENST00000544223 RASL10BQ96S79 203 aa12.43□□□□□ -0.42
HCFC2-202ENST00000544223 SLC26A1Q9H2B4 701 aa12.43□□□□□ -0.42
HCFC2-202ENST00000544223 DIMT1Q9UNQ2 313 aaKnown RBP12.43□□□□□ -0.42
HCFC2-202ENST00000544223 TMEM5Q9Y2B1 443 aa12.43□□□□□ -0.42
HCFC2-202ENST00000544223 SPIN1Q9Y657 262 aaPredicted RBP12.43□□□□□ -0.42
HCFC2-202ENST00000544223 IGHV1-45A0A0A0MS14 117 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 TEX13CA0A0J9YWL9 993 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 SLC35F4A4IF30 521 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 TTC36A6NLP5 189 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 PRR23D1E9PI22 279 aaPredicted RBP12.42□□□□□ -0.42
HCFC2-202ENST00000544223 M0R3G1 203 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 PSMD9O00233 223 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 ITGA10O75578 1167 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 OR7A10O76100 309 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 JMJD7P0C870 316 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 PRR23D2P0DMB1 279 aaPredicted RBP12.42□□□□□ -0.42
HCFC2-202ENST00000544223 NAA10P41227 235 aaPredicted RBP12.42□□□□□ -0.42
HCFC2-202ENST00000544223 ZNF468Q5VIY5 522 aaPredicted RBP12.42□□□□□ -0.42
HCFC2-202ENST00000544223 OR10H4Q8NGA5 316 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 OR11G2Q8NGC1 345 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 OR5W2Q8NH69 310 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 ZHX1-C8orf76Q96EF9 292 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 MMP25Q9NPA2 562 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 CMC2Q9NRP2 79 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 ASB6Q9NWX5 421 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 FBXL2Q9UKC9 423 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 TMEM72A0PK05 275 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 OR6C68A6NDL8 312 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 H3BML4 177 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 PEPDP12955 493 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 AHCYP23526 432 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 RPS27P42677 84 aaKnown RBP12.42□□□□□ -0.42
HCFC2-202ENST00000544223 ROR2Q01974 943 aaKnown RBP12.42□□□□□ -0.42
HCFC2-202ENST00000544223 TRA2AQ13595 282 aaKnown RBP eCLIP12.42□□□□□ -0.42
HCFC2-202ENST00000544223 SLC25A30Q5SVS4 291 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 NXNL2Q5VZ03 156 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 B3GNTL1Q67FW5 361 aaPredicted RBP12.42□□□□□ -0.42
HCFC2-202ENST00000544223 SSX6Q7RTT6 188 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 ADGRG3Q86Y34 549 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 SUMF1Q8NBK3 374 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 B4GALNT2Q8NHY0 566 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 ARL5BQ96KC2 179 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 TEAD3Q99594 435 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 MND1Q9BWT6 205 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 ADAM19Q9H013 955 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 CHRNA9Q9UGM1 479 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 CORINQ9Y5Q5 1042 aa12.42□□□□□ -0.42
HCFC2-202ENST00000544223 C12orf71A8MTZ7 269 aa12.41□□□□□ -0.42
HCFC2-202ENST00000544223 C9J4A7 227 aa12.41□□□□□ -0.42
HCFC2-202ENST00000544223 GALR2O43603 387 aaPredicted RBP12.41□□□□□ -0.42
HCFC2-202ENST00000544223 ZFAND5O76080 213 aa12.41□□□□□ -0.42
HCFC2-202ENST00000544223 NDUFB2O95178 105 aa12.41□□□□□ -0.42
HCFC2-202ENST00000544223 HMGN1P05114 100 aa12.41□□□□□ -0.42
HCFC2-202ENST00000544223 MYL12AP19105 171 aa12.41□□□□□ -0.42
HCFC2-202ENST00000544223 HTR1FP30939 366 aa12.41□□□□□ -0.42
HCFC2-202ENST00000544223 MXD1Q05195 221 aa12.41□□□□□ -0.42
HCFC2-202ENST00000544223 RAB40BQ12829 278 aa12.41□□□□□ -0.42
HCFC2-202ENST00000544223 RPTNQ6XPR3 784 aa12.41□□□□□ -0.42
HCFC2-202ENST00000544223 ZNF517Q6ZMY9 492 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms