RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 PIF1Q9H611 641 aa20.61■□□□□ 0.89
CHFR-222ENST00000544093 CCDC134Q9H6E4 229 aa20.61■□□□□ 0.89
CHFR-222ENST00000544093 RPS6KB2Q9UBS0 482 aa20.61■□□□□ 0.89
CHFR-222ENST00000544093 SLC13A4Q9UKG4 626 aa20.61■□□□□ 0.89
CHFR-222ENST00000544093 SLC9A8Q9Y2E8 581 aa20.61■□□□□ 0.89
CHFR-222ENST00000544093 A0A1W2PPR1 153 aa20.6■□□□□ 0.89
CHFR-222ENST00000544093 ZC3H12DA2A288 527 aaKnown RBP20.6■□□□□ 0.89
CHFR-222ENST00000544093 LIPT2A6NK58 231 aa20.6■□□□□ 0.89
CHFR-222ENST00000544093 MRPL33O75394 65 aaKnown RBP20.6■□□□□ 0.89
CHFR-222ENST00000544093 ADRM1Q16186 407 aa20.6■□□□□ 0.89
CHFR-222ENST00000544093 CYP51A1Q16850 503 aa20.6■□□□□ 0.89
CHFR-222ENST00000544093 DEFB113Q30KQ7 82 aa20.6■□□□□ 0.89
CHFR-222ENST00000544093 COQ5Q5HYK3 327 aa20.6■□□□□ 0.89
CHFR-222ENST00000544093 FBXW9Q5XUX1 488 aa20.6■□□□□ 0.89
CHFR-222ENST00000544093 C5orf46Q6UWT4 87 aa20.6■□□□□ 0.89
CHFR-222ENST00000544093 C20orf204Q6ZNR8 217 aa20.6■□□□□ 0.89
CHFR-222ENST00000544093 BHLHA15Q7RTS1 189 aaPredicted RBP20.6■□□□□ 0.89
CHFR-222ENST00000544093 P2RY8Q86VZ1 359 aa20.6■□□□□ 0.89
CHFR-222ENST00000544093 C10orf111Q8N326 155 aa20.6■□□□□ 0.89
CHFR-222ENST00000544093 LSMEM1Q8N8F7 131 aa20.6■□□□□ 0.89
CHFR-222ENST00000544093 STK35Q8TDR2 534 aa20.6■□□□□ 0.89
CHFR-222ENST00000544093 ZNF775Q96BV0 537 aaPredicted RBP20.6■□□□□ 0.89
CHFR-222ENST00000544093 SF3B5Q9BWJ5 86 aaKnown RBP20.6■□□□□ 0.89
CHFR-222ENST00000544093 BEX4Q9NWD9 120 aaPredicted RBP20.6■□□□□ 0.89
CHFR-222ENST00000544093 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.59■□□□□ 0.89
CHFR-222ENST00000544093 KLF4O43474 513 aa20.59■□□□□ 0.89
CHFR-222ENST00000544093 COX5AP20674 150 aa20.59■□□□□ 0.89
CHFR-222ENST00000544093 NCALDP61601 193 aa20.59■□□□□ 0.89
CHFR-222ENST00000544093 CEACAM7Q14002 265 aa20.59■□□□□ 0.89
CHFR-222ENST00000544093 MAPRE2Q15555 327 aa20.59■□□□□ 0.89
CHFR-222ENST00000544093 C6orf89Q6UWU4 347 aa20.59■□□□□ 0.89
CHFR-222ENST00000544093 ATG4DQ86TL0 474 aaPredicted RBP20.59■□□□□ 0.89
CHFR-222ENST00000544093 RETREG3Q86VR2 466 aa20.59■□□□□ 0.89
CHFR-222ENST00000544093 WFDC8Q8IUA0 241 aa20.59■□□□□ 0.89
CHFR-222ENST00000544093 ARMC8Q8IUR7 673 aa20.59■□□□□ 0.89
CHFR-222ENST00000544093 CCDC103Q8IW40 242 aa20.59■□□□□ 0.89
CHFR-222ENST00000544093 DNAJA4Q8WW22 397 aaPredicted RBP20.59■□□□□ 0.89
CHFR-222ENST00000544093 PIGTQ969N2 578 aa20.59■□□□□ 0.89
CHFR-222ENST00000544093 DNAJA3Q96EY1 480 aa20.59■□□□□ 0.89
CHFR-222ENST00000544093 SH3GL1Q99961 368 aa20.59■□□□□ 0.89
CHFR-222ENST00000544093 TRIM2Q9C040 744 aa20.59■□□□□ 0.89
CHFR-222ENST00000544093 TESQ9UGI8 421 aaKnown RBP20.59■□□□□ 0.89
CHFR-222ENST00000544093 PRSS50Q9UI38 385 aa20.59■□□□□ 0.89
CHFR-222ENST00000544093 PRRC2AP48634 2157 aaKnown RBP20.58■□□□□ 0.89
CHFR-222ENST00000544093 ELOA3DA6NLF2 546 aaPredicted RBP20.58■□□□□ 0.89
CHFR-222ENST00000544093 TMEM229AB2RXF0 380 aa20.58■□□□□ 0.89
CHFR-222ENST00000544093 NPIPB7O75200 414 aa20.58■□□□□ 0.89
CHFR-222ENST00000544093 VAMP5O95183 116 aa20.58■□□□□ 0.89
CHFR-222ENST00000544093 NPPAP01160 153 aa20.58■□□□□ 0.89
CHFR-222ENST00000544093 PNMTP11086 282 aa20.58■□□□□ 0.89
CHFR-222ENST00000544093 ADSLP30566 484 aaPredicted RBP20.58■□□□□ 0.89
CHFR-222ENST00000544093 CYLC2Q14093 348 aaPredicted RBP20.58■□□□□ 0.89
CHFR-222ENST00000544093 SLC17A1Q14916 467 aa20.58■□□□□ 0.89
CHFR-222ENST00000544093 OR7A5Q15622 319 aa20.58■□□□□ 0.89
CHFR-222ENST00000544093 TRMT5Q32P41 509 aaKnown RBP20.58■□□□□ 0.89
CHFR-222ENST00000544093 ELOA3BQ3SY89 546 aa20.58■□□□□ 0.89
CHFR-222ENST00000544093 OTUD3Q5T2D3 398 aaPredicted RBP20.58■□□□□ 0.89
CHFR-222ENST00000544093 C1orf140Q5VVS0 124 aa20.58■□□□□ 0.89
CHFR-222ENST00000544093 UBE2J2Q8N2K1 259 aa20.58■□□□□ 0.89
CHFR-222ENST00000544093 ELOA3Q8NG57 546 aa20.58■□□□□ 0.89
CHFR-222ENST00000544093 MALT1Q9UDY8 824 aa20.58■□□□□ 0.89
CHFR-222ENST00000544093 AQP7P3A6NL99 342 aa20.57■□□□□ 0.88
CHFR-222ENST00000544093 BBIP1A8MTZ0 92 aa20.57■□□□□ 0.88
CHFR-222ENST00000544093 ATP8B1O43520 1251 aa20.57■□□□□ 0.88
CHFR-222ENST00000544093 FRS3O43559 492 aa20.57■□□□□ 0.88
CHFR-222ENST00000544093 AHSA1O95433 338 aa20.57■□□□□ 0.88
CHFR-222ENST00000544093 CD53P19397 219 aa20.57■□□□□ 0.88
CHFR-222ENST00000544093 LOXP28300 417 aaPredicted RBP20.57■□□□□ 0.88
CHFR-222ENST00000544093 MTPNP58546 118 aa20.57■□□□□ 0.88
CHFR-222ENST00000544093 GUCY1A3Q02108 690 aa20.57■□□□□ 0.88
CHFR-222ENST00000544093 ACKR1Q16570 336 aa20.57■□□□□ 0.88
CHFR-222ENST00000544093 FAM91A1Q658Y4 838 aa20.57■□□□□ 0.88
CHFR-222ENST00000544093 NET1Q7Z628 596 aaPredicted RBP20.57■□□□□ 0.88
CHFR-222ENST00000544093 OR52E4Q8NGH9 312 aa20.57■□□□□ 0.88
CHFR-222ENST00000544093 PLPPR2Q96GM1 343 aa20.57■□□□□ 0.88
CHFR-222ENST00000544093 PIP5K1AQ99755 562 aa20.57■□□□□ 0.88
CHFR-222ENST00000544093 ESRP2Q9H6T0 727 aaKnown RBP20.57■□□□□ 0.88
CHFR-222ENST00000544093 KAT8Q9H7Z6 458 aaKnown RBP20.57■□□□□ 0.88
CHFR-222ENST00000544093 ASB6Q9NWX5 421 aa20.57■□□□□ 0.88
CHFR-222ENST00000544093 SELENONQ9NZV5 590 aa20.57■□□□□ 0.88
CHFR-222ENST00000544093 FLVCR1Q9Y5Y0 555 aa20.57■□□□□ 0.88
CHFR-222ENST00000544093 MED13LQ71F56 2210 aa20.57■□□□□ 0.88
CHFR-222ENST00000544093 LYZL6O75951 148 aa20.56■□□□□ 0.88
CHFR-222ENST00000544093 GGT1P19440 569 aa20.56■□□□□ 0.88
CHFR-222ENST00000544093 PCBP3P57721 371 aaKnown RBP20.56■□□□□ 0.88
CHFR-222ENST00000544093 RGS8P57771 180 aaPredicted RBP20.56■□□□□ 0.88
CHFR-222ENST00000544093 BNIP2Q12982 314 aa20.56■□□□□ 0.88
CHFR-222ENST00000544093 TAB1Q15750 504 aa20.56■□□□□ 0.88
CHFR-222ENST00000544093 MMEL1Q495T6 779 aa20.56■□□□□ 0.88
CHFR-222ENST00000544093 TIMM23BQ5SRD1 257 aa20.56■□□□□ 0.88
CHFR-222ENST00000544093 INTS11Q5TA45 600 aaKnown RBP20.56■□□□□ 0.88
CHFR-222ENST00000544093 ULK3Q6PHR2 472 aa20.56■□□□□ 0.88
CHFR-222ENST00000544093 RANBP3LQ86VV4 465 aaPredicted RBP20.56■□□□□ 0.88
CHFR-222ENST00000544093 PTOV1Q86YD1 416 aa20.56■□□□□ 0.88
CHFR-222ENST00000544093 MFSD8Q8NHS3 518 aa20.56■□□□□ 0.88
CHFR-222ENST00000544093 TMEM45BQ96B21 275 aa20.56■□□□□ 0.88
CHFR-222ENST00000544093 MUCL1Q96DR8 90 aa20.56■□□□□ 0.88
CHFR-222ENST00000544093 HS3ST6Q96QI5 342 aa20.56■□□□□ 0.88
CHFR-222ENST00000544093 ADPRHL2Q9NX46 363 aa20.56■□□□□ 0.88
CHFR-222ENST00000544093 TAS2R16Q9NYV7 291 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms