RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 RASGEF1AQ8N9B8 481 aa16.84■□□□□ 0.29
CCT4-204ENST00000544079 OR1J4Q8NGS1 313 aa16.84■□□□□ 0.29
CCT4-204ENST00000544079 CCDC107Q8WV48 283 aa16.84■□□□□ 0.29
CCT4-204ENST00000544079 OR14A2Q96R54 314 aa16.84■□□□□ 0.29
CCT4-204ENST00000544079 CD180Q99467 661 aa16.84■□□□□ 0.29
CCT4-204ENST00000544079 PRKAB1Q9Y478 270 aa16.84■□□□□ 0.29
CCT4-204ENST00000544079 RBBP9O75884 186 aa16.83■□□□□ 0.28
CCT4-204ENST00000544079 GLSO94925 669 aaPredicted RBP16.83■□□□□ 0.28
CCT4-204ENST00000544079 PMS2P2O95744 297 aa16.83■□□□□ 0.28
CCT4-204ENST00000544079 RLN1P04808 185 aa16.83■□□□□ 0.28
CCT4-204ENST00000544079 ABOP16442 354 aa16.83■□□□□ 0.28
CCT4-204ENST00000544079 PDHA2P29803 388 aa16.83■□□□□ 0.28
CCT4-204ENST00000544079 THPOP40225 353 aa16.83■□□□□ 0.28
CCT4-204ENST00000544079 SCAND1P57086 179 aa16.83■□□□□ 0.28
CCT4-204ENST00000544079 FXYD6P3P58550 94 aa16.83■□□□□ 0.28
CCT4-204ENST00000544079 POLR2LP62875 67 aaKnown RBP16.83■□□□□ 0.28
CCT4-204ENST00000544079 PDZK1IP1Q13113 114 aa16.83■□□□□ 0.28
CCT4-204ENST00000544079 RNF212Q495C1 297 aa16.83■□□□□ 0.28
CCT4-204ENST00000544079 ZNF658BQ4V348 819 aaPredicted RBP16.83■□□□□ 0.28
CCT4-204ENST00000544079 FAM109BQ6ICB4 259 aaPredicted RBP16.83■□□□□ 0.28
CCT4-204ENST00000544079 H3F3CQ6NXT2 135 aa16.83■□□□□ 0.28
CCT4-204ENST00000544079 HMGN2P46Q86SG4 172 aa16.83■□□□□ 0.28
CCT4-204ENST00000544079 OR56A1Q8NGH5 318 aa16.83■□□□□ 0.28
CCT4-204ENST00000544079 PXYLP1Q8TE99 480 aa16.83■□□□□ 0.28
CCT4-204ENST00000544079 ZNF689Q96CS4 500 aaPredicted RBP16.83■□□□□ 0.28
CCT4-204ENST00000544079 EGLN1Q9GZT9 426 aa16.83■□□□□ 0.28
CCT4-204ENST00000544079 TMEM185BQ9H7F4 350 aa16.83■□□□□ 0.28
CCT4-204ENST00000544079 MYOZ1Q9NP98 299 aaPredicted RBP16.83■□□□□ 0.28
CCT4-204ENST00000544079 TMEM138Q9NPI0 162 aa16.83■□□□□ 0.28
CCT4-204ENST00000544079 NIT2Q9NQR4 276 aa16.83■□□□□ 0.28
CCT4-204ENST00000544079 C5AR2Q9P296 337 aa16.83■□□□□ 0.28
CCT4-204ENST00000544079 V9GY05 133 aa16.83■□□□□ 0.28
CCT4-204ENST00000544079 FRS3O43559 492 aa16.82■□□□□ 0.28
CCT4-204ENST00000544079 HTR3BO95264 441 aa16.82■□□□□ 0.28
CCT4-204ENST00000544079 IGHV2-70P01814 119 aa16.82■□□□□ 0.28
CCT4-204ENST00000544079 CDK2P24941 298 aa16.82■□□□□ 0.28
CCT4-204ENST00000544079 TAS2R38P59533 333 aa16.82■□□□□ 0.28
CCT4-204ENST00000544079 FOXK2Q01167 660 aa16.82■□□□□ 0.28
CCT4-204ENST00000544079 SLC16A13Q7RTY0 426 aa16.82■□□□□ 0.28
CCT4-204ENST00000544079 VRK2Q86Y07 508 aa16.82■□□□□ 0.28
CCT4-204ENST00000544079 OR4C16Q8NGL9 310 aa16.82■□□□□ 0.28
CCT4-204ENST00000544079 C2CD4CQ8TF44 421 aa16.82■□□□□ 0.28
CCT4-204ENST00000544079 KLK6Q92876 244 aa16.82■□□□□ 0.28
CCT4-204ENST00000544079 SCAMP4Q969E2 229 aa16.82■□□□□ 0.28
CCT4-204ENST00000544079 ZNF707Q96C28 371 aaPredicted RBP16.82■□□□□ 0.28
CCT4-204ENST00000544079 PELI1Q96FA3 418 aa16.82■□□□□ 0.28
CCT4-204ENST00000544079 SIDT1Q9NXL6 827 aaKnown RBP16.82■□□□□ 0.28
CCT4-204ENST00000544079 OR5V1Q9UGF6 321 aa16.82■□□□□ 0.28
CCT4-204ENST00000544079 ZNF223Q9UK11 482 aaPredicted RBP16.82■□□□□ 0.28
CCT4-204ENST00000544079 CASP8AP2Q9UKL3 1982 aa16.82■□□□□ 0.28
CCT4-204ENST00000544079 SLC25A12O75746 678 aa16.82■□□□□ 0.28
CCT4-204ENST00000544079 MRPL3P09001 348 aaKnown RBP16.82■□□□□ 0.28
CCT4-204ENST00000544079 DDX6P26196 483 aaKnown RBP eCLIP16.82■□□□□ 0.28
CCT4-204ENST00000544079 TEAD1P28347 426 aa16.82■□□□□ 0.28
CCT4-204ENST00000544079 NTSP30990 170 aa16.82■□□□□ 0.28
CCT4-204ENST00000544079 PRAMEF14Q5SWL7 426 aa16.82■□□□□ 0.28
CCT4-204ENST00000544079 SLC39A7Q92504 469 aa16.82■□□□□ 0.28
CCT4-204ENST00000544079 CNTNAP3BQ96NU0 1288 aa16.82■□□□□ 0.28
CCT4-204ENST00000544079 WDR13Q9H1Z4 485 aa16.82■□□□□ 0.28
CCT4-204ENST00000544079 EPHX3Q9H6B9 360 aa16.82■□□□□ 0.28
CCT4-204ENST00000544079 PRDM9Q9NQV7 894 aa16.82■□□□□ 0.28
CCT4-204ENST00000544079 SLC22A11Q9NSA0 550 aa16.82■□□□□ 0.28
CCT4-204ENST00000544079 C14orf105Q9NVL8 296 aa16.82■□□□□ 0.28
CCT4-204ENST00000544079 PMS2P1A4D2B8 440 aa16.81■□□□□ 0.28
CCT4-204ENST00000544079 RIIAD1A6NNX1 92 aa16.81■□□□□ 0.28
CCT4-204ENST00000544079 RTCAO00442 366 aaKnown RBP16.81■□□□□ 0.28
CCT4-204ENST00000544079 IL9P15248 144 aa16.81■□□□□ 0.28
CCT4-204ENST00000544079 HMGA1P17096 107 aaKnown RBP16.81■□□□□ 0.28
CCT4-204ENST00000544079 TGM3Q08188 693 aa16.81■□□□□ 0.28
CCT4-204ENST00000544079 HABP2Q14520 560 aaPredicted RBP16.81■□□□□ 0.28
CCT4-204ENST00000544079 LY6G6FQ5SQ64 297 aa16.81■□□□□ 0.28
CCT4-204ENST00000544079 ACOT7LQ6ZUV0 252 aa16.81■□□□□ 0.28
CCT4-204ENST00000544079 MISPQ8IVT2 679 aa16.81■□□□□ 0.28
CCT4-204ENST00000544079 BEST3Q8N1M1 668 aa16.81■□□□□ 0.28
CCT4-204ENST00000544079 RPS4Y2Q8TD47 263 aa16.81■□□□□ 0.28
CCT4-204ENST00000544079 ARL11Q969Q4 196 aa16.81■□□□□ 0.28
CCT4-204ENST00000544079 F2RL3Q96RI0 385 aa16.81■□□□□ 0.28
CCT4-204ENST00000544079 BBS4Q96RK4 519 aa16.81■□□□□ 0.28
CCT4-204ENST00000544079 PELI2Q9HAT8 420 aa16.81■□□□□ 0.28
CCT4-204ENST00000544079 TCF7L1Q9HCS4 588 aa16.81■□□□□ 0.28
CCT4-204ENST00000544079 NOX4Q9NPH5 578 aa16.81■□□□□ 0.28
CCT4-204ENST00000544079 UPB1Q9UBR1 384 aa16.81■□□□□ 0.28
CCT4-204ENST00000544079 MTCL1Q9Y4B5 1905 aaKnown RBP16.81■□□□□ 0.28
CCT4-204ENST00000544079 POP4O95707 220 aaKnown RBP16.81■□□□□ 0.28
CCT4-204ENST00000544079 HMGN2P05204 90 aaKnown RBP16.81■□□□□ 0.28
CCT4-204ENST00000544079 OR2T7P0C7T2 308 aa16.81■□□□□ 0.28
CCT4-204ENST00000544079 CTSAP10619 480 aa16.81■□□□□ 0.28
CCT4-204ENST00000544079 SYN1P17600 705 aa16.81■□□□□ 0.28
CCT4-204ENST00000544079 SNRPEP62304 92 aaKnown RBP16.81■□□□□ 0.28
CCT4-204ENST00000544079 SSBP1Q04837 148 aaKnown RBP16.81■□□□□ 0.28
CCT4-204ENST00000544079 LASP1Q14847 261 aaKnown RBP16.81■□□□□ 0.28
CCT4-204ENST00000544079 IRF4Q15306 451 aa16.81■□□□□ 0.28
CCT4-204ENST00000544079 OR2T27Q8NH04 317 aa16.81■□□□□ 0.28
CCT4-204ENST00000544079 QRSL1Q9H0R6 528 aaKnown RBP16.81■□□□□ 0.28
CCT4-204ENST00000544079 OR51V1Q9H2C8 321 aa16.81■□□□□ 0.28
CCT4-204ENST00000544079 CCDC86Q9H6F5 360 aaKnown RBP16.81■□□□□ 0.28
CCT4-204ENST00000544079 LHX9Q9NQ69 397 aa16.81■□□□□ 0.28
CCT4-204ENST00000544079 TRBV2A0A0J9YWF9 115 aa16.8■□□□□ 0.28
CCT4-204ENST00000544079 A0A1B0GTI1 187 aa16.8■□□□□ 0.28
CCT4-204ENST00000544079 TMPRSS11DO60235 418 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms