RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 UBR5O95071 2799 aaPredicted RBP12.21□□□□□ -0.46
SP140-213ENST00000543928 ARHGAP21Q5T5U3 1957 aa12.21□□□□□ -0.46
SP140-213ENST00000543928 HELZ2Q9BYK8 2649 aaKnown RBP12.2□□□□□ -0.46
SP140-213ENST00000543928 MBD3L4A6NDZ8 208 aaPredicted RBP12.2□□□□□ -0.46
SP140-213ENST00000543928 MBD3L3A6NE82 208 aaPredicted RBP12.2□□□□□ -0.46
SP140-213ENST00000543928 MBD3L5A6NJ08 208 aaPredicted RBP12.2□□□□□ -0.46
SP140-213ENST00000543928 CIB2O75838 187 aa12.2□□□□□ -0.46
SP140-213ENST00000543928 TOXO94900 526 aa12.2□□□□□ -0.46
SP140-213ENST00000543928 PRSS23O95084 383 aa12.2□□□□□ -0.46
SP140-213ENST00000543928 PMS2P2O95744 297 aa12.2□□□□□ -0.46
SP140-213ENST00000543928 FABP3P05413 133 aa12.2□□□□□ -0.46
SP140-213ENST00000543928 ITGA2P17301 1181 aa12.2□□□□□ -0.46
SP140-213ENST00000543928 RHCEP18577 417 aa12.2□□□□□ -0.46
SP140-213ENST00000543928 FUT4P22083 530 aa12.2□□□□□ -0.46
SP140-213ENST00000543928 RPS5P46782 204 aaKnown RBP12.2□□□□□ -0.46
SP140-213ENST00000543928 ERFP50548 548 aa12.2□□□□□ -0.46
SP140-213ENST00000543928 OR2B6P58173 313 aa12.2□□□□□ -0.46
SP140-213ENST00000543928 CHRNB3Q05901 458 aa12.2□□□□□ -0.46
SP140-213ENST00000543928 ZNF239Q16600 458 aaKnown RBP12.2□□□□□ -0.46
SP140-213ENST00000543928 IQCCQ4KMZ1 466 aa12.2□□□□□ -0.46
SP140-213ENST00000543928 FAM98BQ52LJ0 330 aaKnown RBP12.2□□□□□ -0.46
SP140-213ENST00000543928 C1orf146Q5VVC0 180 aa12.2□□□□□ -0.46
SP140-213ENST00000543928 MTFR2Q6P444 385 aa12.2□□□□□ -0.46
SP140-213ENST00000543928 TTC33Q6PID6 262 aaPredicted RBP12.2□□□□□ -0.46
SP140-213ENST00000543928 C5orf46Q6UWT4 87 aa12.2□□□□□ -0.46
SP140-213ENST00000543928 ZDHHC21Q8IVQ6 265 aa12.2□□□□□ -0.46
SP140-213ENST00000543928 NKAIN4Q8IVV8 208 aa12.2□□□□□ -0.46
SP140-213ENST00000543928 C9orf106Q8NAJ2 232 aa12.2□□□□□ -0.46
SP140-213ENST00000543928 MBD3L2Q8NHZ7 208 aaPredicted RBP12.2□□□□□ -0.46
SP140-213ENST00000543928 ROBO4Q8WZ75 1007 aa12.2□□□□□ -0.46
SP140-213ENST00000543928 KTI12Q96EK9 354 aaPredicted RBP12.2□□□□□ -0.46
SP140-213ENST00000543928 TM9SF2Q99805 663 aa12.2□□□□□ -0.46
SP140-213ENST00000543928 TMEM43Q9BTV4 400 aa12.2□□□□□ -0.46
SP140-213ENST00000543928 MAGIXQ9H6Y5 334 aa12.2□□□□□ -0.46
SP140-213ENST00000543928 IL1RAPQ9NPH3 570 aa12.2□□□□□ -0.46
SP140-213ENST00000543928 TRAPPC4Q9Y296 219 aa12.2□□□□□ -0.46
SP140-213ENST00000543928 FASNP49327 2511 aaKnown RBP12.19□□□□□ -0.46
SP140-213ENST00000543928 DOCK7Q96N67 2140 aa12.19□□□□□ -0.46
SP140-213ENST00000543928 TRAV36DV7A0A075B6V5 113 aa12.19□□□□□ -0.46
SP140-213ENST00000543928 IGHV3-15A0A0B4J1V0 119 aa12.19□□□□□ -0.46
SP140-213ENST00000543928 DHRS12A0PJE2 317 aa12.19□□□□□ -0.46
SP140-213ENST00000543928 LIPT2A6NK58 231 aa12.19□□□□□ -0.46
SP140-213ENST00000543928 AQP8O94778 261 aa12.19□□□□□ -0.46
SP140-213ENST00000543928 MT-ND1P03886 318 aa12.19□□□□□ -0.46
SP140-213ENST00000543928 GPIP06744 558 aa12.19□□□□□ -0.46
SP140-213ENST00000543928 UMPSP11172 480 aa12.19□□□□□ -0.46
SP140-213ENST00000543928 FCGR2AP12318 317 aa12.19□□□□□ -0.46
SP140-213ENST00000543928 ENPP1P22413 925 aa12.19□□□□□ -0.46
SP140-213ENST00000543928 TIMP3P35625 211 aa12.19□□□□□ -0.46
SP140-213ENST00000543928 PER3P56645 1201 aa12.19□□□□□ -0.46
SP140-213ENST00000543928 SLC35A1P78382 337 aa12.19□□□□□ -0.46
SP140-213ENST00000543928 ADORA2A-AS1P86434 159 aa12.19□□□□□ -0.46
SP140-213ENST00000543928 TRAM2Q15035 370 aa12.19□□□□□ -0.46
SP140-213ENST00000543928 OR7A5Q15622 319 aa12.19□□□□□ -0.46
SP140-213ENST00000543928 ZSCAN26Q16670 478 aa12.19□□□□□ -0.46
SP140-213ENST00000543928 PIWIL3Q7Z3Z3 882 aaKnown RBP12.19□□□□□ -0.46
SP140-213ENST00000543928 ADGRG5Q8IZF4 528 aa12.19□□□□□ -0.46
SP140-213ENST00000543928 PIK3C3Q8NEB9 887 aa12.19□□□□□ -0.46
SP140-213ENST00000543928 TMEM255BQ8WV15 326 aa12.19□□□□□ -0.46
SP140-213ENST00000543928 RND1Q92730 232 aa12.19□□□□□ -0.46
SP140-213ENST00000543928 TAAR8Q969N4 342 aa12.19□□□□□ -0.46
SP140-213ENST00000543928 ZHX1-C8orf76Q96EF9 292 aa12.19□□□□□ -0.46
SP140-213ENST00000543928 EPYCQ99645 322 aa12.19□□□□□ -0.46
SP140-213ENST00000543928 PIP5K1AQ99755 562 aa12.19□□□□□ -0.46
SP140-213ENST00000543928 ZNF426Q9BUY5 554 aa12.19□□□□□ -0.46
SP140-213ENST00000543928 PTDSS2Q9BVG9 487 aa12.19□□□□□ -0.46
SP140-213ENST00000543928 TAPBPLQ9BX59 468 aa12.19□□□□□ -0.46
SP140-213ENST00000543928 NMNAT1Q9HAN9 279 aaPredicted RBP12.19□□□□□ -0.46
SP140-213ENST00000543928 MAN2C1Q9NTJ4 1040 aa12.19□□□□□ -0.46
SP140-213ENST00000543928 AURKCQ9UQB9 309 aa12.19□□□□□ -0.46
SP140-213ENST00000543928 MED12LQ86YW9 2145 aa12.19□□□□□ -0.46
SP140-213ENST00000543928 FLNCQ14315 2725 aa12.18□□□□□ -0.46
SP140-213ENST00000543928 A0A0G2JNJ9 132 aa12.18□□□□□ -0.46
SP140-213ENST00000543928 TCRBV3S1A0A5B6 114 aa12.18□□□□□ -0.46
SP140-213ENST00000543928 FTCDNL1E5RQL4 147 aa12.18□□□□□ -0.46
SP140-213ENST00000543928 KPNA4O00629 521 aaPredicted RBP12.18□□□□□ -0.46
SP140-213ENST00000543928 SMAD9O15198 467 aaKnown RBP12.18□□□□□ -0.46
SP140-213ENST00000543928 DNPH1O43598 174 aa12.18□□□□□ -0.46
SP140-213ENST00000543928 OR2T1O43869 369 aa12.18□□□□□ -0.46
SP140-213ENST00000543928 AGFG2O95081 481 aa12.18□□□□□ -0.46
SP140-213ENST00000543928 IL2RAP01589 272 aa12.18□□□□□ -0.46
SP140-213ENST00000543928 H1F0P07305 194 aaKnown RBP12.18□□□□□ -0.46
SP140-213ENST00000543928 KLK2P20151 261 aa12.18□□□□□ -0.46
SP140-213ENST00000543928 FPR1P21462 350 aa12.18□□□□□ -0.46
SP140-213ENST00000543928 CEACAM8P31997 349 aaPredicted RBP12.18□□□□□ -0.46
SP140-213ENST00000543928 RBM34P42696 430 aaKnown RBP12.18□□□□□ -0.46
SP140-213ENST00000543928 MAGEA2P43356 314 aa12.18□□□□□ -0.46
SP140-213ENST00000543928 AGFG1P52594 562 aaKnown RBP12.18□□□□□ -0.46
SP140-213ENST00000543928 UGT2B15P54855 530 aa12.18□□□□□ -0.46
SP140-213ENST00000543928 SRSF1Q07955 248 aaKnown RBP eCLIP12.18□□□□□ -0.46
SP140-213ENST00000543928 FAM69AQ5T7M9 428 aa12.18□□□□□ -0.46
SP140-213ENST00000543928 RIPPLY2Q5TAB7 128 aa12.18□□□□□ -0.46
SP140-213ENST00000543928 FCRLAQ7L513 359 aa12.18□□□□□ -0.46
SP140-213ENST00000543928 NAXEQ8NCW5 288 aa12.18□□□□□ -0.46
SP140-213ENST00000543928 MFSD8Q8NHS3 518 aa12.18□□□□□ -0.46
SP140-213ENST00000543928 CANT1Q8WVQ1 401 aa12.18□□□□□ -0.46
SP140-213ENST00000543928 TMEM239Q8WW34 195 aa12.18□□□□□ -0.46
SP140-213ENST00000543928 INTS12Q96CB8 462 aaKnown RBP12.18□□□□□ -0.46
SP140-213ENST00000543928 SLC25A36Q96CQ1 311 aa12.18□□□□□ -0.46
SP140-213ENST00000543928 HS6ST2Q96MM7 605 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms