RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 GUSBP1Q15486 140 aa13.48□□□□□ -0.25
CD9-210ENST00000543916 IFI44LQ53G44 452 aa13.48□□□□□ -0.25
CD9-210ENST00000543916 SWT1Q5T5J6 900 aaKnown RBP13.48□□□□□ -0.25
CD9-210ENST00000543916 C1orf140Q5VVS0 124 aa13.48□□□□□ -0.25
CD9-210ENST00000543916 LINC00114Q6XXX2 140 aa13.48□□□□□ -0.25
CD9-210ENST00000543916 FKBP9P1Q75LS8 142 aa13.48□□□□□ -0.25
CD9-210ENST00000543916 FCRLAQ7L513 359 aa13.48□□□□□ -0.25
CD9-210ENST00000543916 GDF7Q7Z4P5 450 aa13.48□□□□□ -0.25
CD9-210ENST00000543916 ABHD3Q8WU67 409 aa13.48□□□□□ -0.25
CD9-210ENST00000543916 GEMIN6Q8WXD5 167 aaKnown RBP13.48□□□□□ -0.25
CD9-210ENST00000543916 KTI12Q96EK9 354 aaPredicted RBP13.48□□□□□ -0.25
CD9-210ENST00000543916 THTPAQ9BU02 230 aa13.48□□□□□ -0.25
CD9-210ENST00000543916 PTDSS2Q9BVG9 487 aa13.48□□□□□ -0.25
CD9-210ENST00000543916 ZNF629Q9UEG4 869 aaPredicted RBP13.48□□□□□ -0.25
CD9-210ENST00000543916 SAMD4AQ9UPU9 718 aaKnown RBP13.48□□□□□ -0.25
CD9-210ENST00000543916 TRAPPC4Q9Y296 219 aa13.48□□□□□ -0.25
CD9-210ENST00000543916 V9GYQ6 96 aa13.48□□□□□ -0.25
CD9-210ENST00000543916 LIPT2A6NK58 231 aa13.47□□□□□ -0.25
CD9-210ENST00000543916 DNPH1O43598 174 aa13.47□□□□□ -0.25
CD9-210ENST00000543916 PRKD3O94806 890 aa13.47□□□□□ -0.25
CD9-210ENST00000543916 IFNW1P05000 195 aa13.47□□□□□ -0.25
CD9-210ENST00000543916 FPR1P21462 350 aa13.47□□□□□ -0.25
CD9-210ENST00000543916 KIR2DL2P43627 348 aaPredicted RBP13.47□□□□□ -0.25
CD9-210ENST00000543916 SIRPAP78324 504 aa13.47□□□□□ -0.25
CD9-210ENST00000543916 MS4A2Q01362 244 aa13.47□□□□□ -0.25
CD9-210ENST00000543916 PIN1Q13526 163 aaPredicted RBP13.47□□□□□ -0.25
CD9-210ENST00000543916 DNAL1Q4LDG9 190 aa13.47□□□□□ -0.25
CD9-210ENST00000543916 ABLIM2Q6H8Q1 611 aa13.47□□□□□ -0.25
CD9-210ENST00000543916 VWA1Q6PCB0 445 aa13.47□□□□□ -0.25
CD9-210ENST00000543916 CYP2R1Q6VVX0 501 aa13.47□□□□□ -0.25
CD9-210ENST00000543916 TSEN54Q7Z6J9 526 aaKnown RBP13.47□□□□□ -0.25
CD9-210ENST00000543916 SLC41A3Q96GZ6 507 aa13.47□□□□□ -0.25
CD9-210ENST00000543916 NSMCE2Q96MF7 247 aa13.47□□□□□ -0.25
CD9-210ENST00000543916 PRSS27Q9BQR3 290 aa13.47□□□□□ -0.25
CD9-210ENST00000543916 BTBD10Q9BSF8 475 aa13.47□□□□□ -0.25
CD9-210ENST00000543916 SFXN3Q9BWM7 321 aa13.47□□□□□ -0.25
CD9-210ENST00000543916 ACTR3BQ9P1U1 418 aa13.47□□□□□ -0.25
CD9-210ENST00000543916 A4GNTQ9UNA3 340 aa13.47□□□□□ -0.25
CD9-210ENST00000543916 BAHCC1Q9P281 2608 aa13.47□□□□□ -0.25
CD9-210ENST00000543916 HCFC1P51610 2035 aa13.47□□□□□ -0.25
CD9-210ENST00000543916 FTCDNL1E5RQL4 147 aa13.46□□□□□ -0.25
CD9-210ENST00000543916 J3KTA2 159 aa13.46□□□□□ -0.25
CD9-210ENST00000543916 DVL2O14641 736 aa13.46□□□□□ -0.25
CD9-210ENST00000543916 CYTIPO60759 359 aa13.46□□□□□ -0.25
CD9-210ENST00000543916 RAMP1O60894 148 aa13.46□□□□□ -0.25
CD9-210ENST00000543916 SS18L1O75177 396 aaPredicted RBP13.46□□□□□ -0.25
CD9-210ENST00000543916 OR5F1O95221 314 aa13.46□□□□□ -0.25
CD9-210ENST00000543916 AHSA1O95433 338 aa13.46□□□□□ -0.25
CD9-210ENST00000543916 IL18BPO95998 194 aa13.46□□□□□ -0.25
CD9-210ENST00000543916 SEMG1P04279 462 aa13.46□□□□□ -0.25
CD9-210ENST00000543916 GPIP06744 558 aa13.46□□□□□ -0.25
CD9-210ENST00000543916 CRHP06850 196 aa13.46□□□□□ -0.25
CD9-210ENST00000543916 FUT4P22083 530 aa13.46□□□□□ -0.25
CD9-210ENST00000543916 OPRM1P35372 400 aa13.46□□□□□ -0.25
CD9-210ENST00000543916 RPS5P46782 204 aaKnown RBP13.46□□□□□ -0.25
CD9-210ENST00000543916 YAP1P46937 504 aaKnown RBP13.46□□□□□ -0.25
CD9-210ENST00000543916 TAS2R41P59536 307 aa13.46□□□□□ -0.25
CD9-210ENST00000543916 SLC35A1P78382 337 aa13.46□□□□□ -0.25
CD9-210ENST00000543916 H3F3AP84243 136 aa13.46□□□□□ -0.25
CD9-210ENST00000543916 TRIM25Q14258 630 aaKnown RBP13.46□□□□□ -0.25
CD9-210ENST00000543916 OR7A5Q15622 319 aa13.46□□□□□ -0.25
CD9-210ENST00000543916 CCDC103Q8IW40 242 aa13.46□□□□□ -0.25
CD9-210ENST00000543916 CNEP1R1Q8N9A8 125 aa13.46□□□□□ -0.25
CD9-210ENST00000543916 TAAR8Q969N4 342 aa13.46□□□□□ -0.25
CD9-210ENST00000543916 CCDC124Q96CT7 223 aaKnown RBP13.46□□□□□ -0.25
CD9-210ENST00000543916 STARD4Q96DR4 205 aa13.46□□□□□ -0.25
CD9-210ENST00000543916 ZHX1-C8orf76Q96EF9 292 aa13.46□□□□□ -0.25
CD9-210ENST00000543916 GMPPAQ96IJ6 420 aaPredicted RBP13.46□□□□□ -0.25
CD9-210ENST00000543916 PRRC1Q96M27 445 aa13.46□□□□□ -0.25
CD9-210ENST00000543916 PSD2Q9BQI7 771 aa13.46□□□□□ -0.25
CD9-210ENST00000543916 TMEM43Q9BTV4 400 aa13.46□□□□□ -0.25
CD9-210ENST00000543916 POLR2J2Q9GZM3 115 aaKnown RBP13.46□□□□□ -0.25
CD9-210ENST00000543916 POLR2J3Q9H1A7 115 aaKnown RBP13.46□□□□□ -0.25
CD9-210ENST00000543916 RIMS3Q9UJD0 308 aa13.46□□□□□ -0.25
CD9-210ENST00000543916 ING1Q9UK53 422 aaPredicted RBP13.46□□□□□ -0.25
CD9-210ENST00000543916 PCNX1Q96RV3 2341 aa13.45□□□□□ -0.26
CD9-210ENST00000543916 TRAV36DV7A0A075B6V5 113 aa13.45□□□□□ -0.26
CD9-210ENST00000543916 FFAR1O14842 300 aa13.45□□□□□ -0.26
CD9-210ENST00000543916 DNAJC8O75937 253 aaPredicted RBP13.45□□□□□ -0.26
CD9-210ENST00000543916 AKR7A3O95154 331 aa13.45□□□□□ -0.26
CD9-210ENST00000543916 PLGP00747 810 aaPredicted RBP13.45□□□□□ -0.26
CD9-210ENST00000543916 GRNP28799 593 aaKnown RBP13.45□□□□□ -0.26
CD9-210ENST00000543916 AGTR1P30556 359 aa13.45□□□□□ -0.26
CD9-210ENST00000543916 VLDLRP98155 873 aa13.45□□□□□ -0.26
CD9-210ENST00000543916 TFF3Q07654 80 aa13.45□□□□□ -0.26
CD9-210ENST00000543916 RASGEF1BQ0VAM2 473 aa13.45□□□□□ -0.26
CD9-210ENST00000543916 RNPS1Q15287 305 aaKnown RBP13.45□□□□□ -0.26
CD9-210ENST00000543916 SLC25A35Q3KQZ1 300 aa13.45□□□□□ -0.26
CD9-210ENST00000543916 LCN8Q6JVE9 175 aa13.45□□□□□ -0.26
CD9-210ENST00000543916 PGM2L1Q6PCE3 622 aa13.45□□□□□ -0.26
CD9-210ENST00000543916 C5orf46Q6UWT4 87 aa13.45□□□□□ -0.26
CD9-210ENST00000543916 FAM214BQ7L5A3 538 aa13.45□□□□□ -0.26
CD9-210ENST00000543916 MAMDC2Q7Z304 686 aaPredicted RBP13.45□□□□□ -0.26
CD9-210ENST00000543916 BTLAQ7Z6A9 289 aa13.45□□□□□ -0.26
CD9-210ENST00000543916 NKAIN4Q8IVV8 208 aa13.45□□□□□ -0.26
CD9-210ENST00000543916 MCEMP1Q8IX19 187 aa13.45□□□□□ -0.26
CD9-210ENST00000543916 SLC43A2Q8N370 569 aa13.45□□□□□ -0.26
CD9-210ENST00000543916 TMEM99Q8N816 258 aa13.45□□□□□ -0.26
CD9-210ENST00000543916 MFSD8Q8NHS3 518 aa13.45□□□□□ -0.26
CD9-210ENST00000543916 ASB9Q96DX5 294 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms