RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 PER3P56645 1201 aa10.93□□□□□ -0.66
DDX55-210ENST00000543016 ACTR3P61158 418 aa10.93□□□□□ -0.66
DDX55-210ENST00000543016 C4orf17Q53FE4 359 aa10.93□□□□□ -0.66
DDX55-210ENST00000543016 FAM69AQ5T7M9 428 aa10.93□□□□□ -0.66
DDX55-210ENST00000543016 TSEN54Q7Z6J9 526 aaKnown RBP10.93□□□□□ -0.66
DDX55-210ENST00000543016 LINC00471Q8N535 108 aa10.93□□□□□ -0.66
DDX55-210ENST00000543016 PRR7Q8TB68 274 aa10.93□□□□□ -0.66
DDX55-210ENST00000543016 CANT1Q8WVQ1 401 aa10.93□□□□□ -0.66
DDX55-210ENST00000543016 TMEM239Q8WW34 195 aa10.93□□□□□ -0.66
DDX55-210ENST00000543016 ACOT11Q8WXI4 607 aaPredicted RBP10.93□□□□□ -0.66
DDX55-210ENST00000543016 RSRC1Q96IZ7 334 aaKnown RBP10.93□□□□□ -0.66
DDX55-210ENST00000543016 HS3ST6Q96QI5 342 aa10.93□□□□□ -0.66
DDX55-210ENST00000543016 PRSS27Q9BQR3 290 aa10.93□□□□□ -0.66
DDX55-210ENST00000543016 TACO1Q9BSH4 297 aaKnown RBP10.93□□□□□ -0.66
DDX55-210ENST00000543016 NAA11Q9BSU3 229 aaPredicted RBP10.93□□□□□ -0.66
DDX55-210ENST00000543016 CHID1Q9BWS9 393 aa10.93□□□□□ -0.66
DDX55-210ENST00000543016 COQ10BQ9H8M1 238 aa10.93□□□□□ -0.66
DDX55-210ENST00000543016 KRCC1Q9NPI7 259 aaPredicted RBP10.93□□□□□ -0.66
DDX55-210ENST00000543016 TNFRSF10DQ9UBN6 386 aa10.93□□□□□ -0.66
DDX55-210ENST00000543016 AURKCQ9UQB9 309 aa10.93□□□□□ -0.66
DDX55-210ENST00000543016 MEMO1Q9Y316 297 aa10.93□□□□□ -0.66
DDX55-210ENST00000543016 MED31Q9Y3C7 131 aa10.93□□□□□ -0.66
DDX55-210ENST00000543016 CORINQ9Y5Q5 1042 aa10.93□□□□□ -0.66
DDX55-210ENST00000543016 V9GYQ6 96 aa10.93□□□□□ -0.66
DDX55-210ENST00000543016 PRRC2CQ9Y520 2896 aaKnown RBP10.93□□□□□ -0.66
DDX55-210ENST00000543016 IGKV1D-42A0A075B6H8 117 aa10.92□□□□□ -0.66
DDX55-210ENST00000543016 MBD3L4A6NDZ8 208 aaPredicted RBP10.92□□□□□ -0.66
DDX55-210ENST00000543016 MBD3L3A6NE82 208 aaPredicted RBP10.92□□□□□ -0.66
DDX55-210ENST00000543016 MBD3L5A6NJ08 208 aaPredicted RBP10.92□□□□□ -0.66
DDX55-210ENST00000543016 LIPT2A6NK58 231 aa10.92□□□□□ -0.66
DDX55-210ENST00000543016 SLC22A20A6NK97 555 aa10.92□□□□□ -0.66
DDX55-210ENST00000543016 hCG_2039718K7EN88 272 aa10.92□□□□□ -0.66
DDX55-210ENST00000543016 CXCL13O43927 109 aa10.92□□□□□ -0.66
DDX55-210ENST00000543016 VAMP5O95183 116 aa10.92□□□□□ -0.66
DDX55-210ENST00000543016 WISP1O95388 367 aa10.92□□□□□ -0.66
DDX55-210ENST00000543016 THY1P04216 161 aa10.92□□□□□ -0.66
DDX55-210ENST00000543016 FCGR1AP12314 374 aa10.92□□□□□ -0.66
DDX55-210ENST00000543016 PLA2G2AP14555 144 aa10.92□□□□□ -0.66
DDX55-210ENST00000543016 ENPP1P22413 925 aa10.92□□□□□ -0.66
DDX55-210ENST00000543016 SHC1P29353 583 aa10.92□□□□□ -0.66
DDX55-210ENST00000543016 YAP1P46937 504 aaKnown RBP10.92□□□□□ -0.66
DDX55-210ENST00000543016 HMGA2P52926 109 aa10.92□□□□□ -0.66
DDX55-210ENST00000543016 EGR4Q05215 589 aa10.92□□□□□ -0.66
DDX55-210ENST00000543016 PDK3Q15120 406 aa10.92□□□□□ -0.66
DDX55-210ENST00000543016 RNPS1Q15287 305 aaKnown RBP10.92□□□□□ -0.66
DDX55-210ENST00000543016 RIPPLY2Q5TAB7 128 aa10.92□□□□□ -0.66
DDX55-210ENST00000543016 ZFP1Q6P2D0 407 aa10.92□□□□□ -0.66
DDX55-210ENST00000543016 PAQR6Q6TCH4 344 aa10.92□□□□□ -0.66
DDX55-210ENST00000543016 RRM2BQ7LG56 351 aa10.92□□□□□ -0.66
DDX55-210ENST00000543016 P4HA3Q7Z4N8 544 aa10.92□□□□□ -0.66
DDX55-210ENST00000543016 TSPYL5Q86VY4 417 aaPredicted RBP10.92□□□□□ -0.66
DDX55-210ENST00000543016 SCAIQ8N9R8 606 aa10.92□□□□□ -0.66
DDX55-210ENST00000543016 MBD3L2Q8NHZ7 208 aaPredicted RBP10.92□□□□□ -0.66
DDX55-210ENST00000543016 ARL5BQ96KC2 179 aa10.92□□□□□ -0.66
DDX55-210ENST00000543016 TRIB1Q96RU8 372 aa10.92□□□□□ -0.66
DDX55-210ENST00000543016 DMRTA2Q96SC8 542 aa10.92□□□□□ -0.66
DDX55-210ENST00000543016 TTYH2Q9BSA4 534 aa10.92□□□□□ -0.66
DDX55-210ENST00000543016 PRRG4Q9BZD6 226 aa10.92□□□□□ -0.66
DDX55-210ENST00000543016 OR11A1Q9GZK7 315 aa10.92□□□□□ -0.66
DDX55-210ENST00000543016 ARMC1Q9NVT9 282 aa10.92□□□□□ -0.66
DDX55-210ENST00000543016 CLCF1Q9UBD9 225 aa10.92□□□□□ -0.66
DDX55-210ENST00000543016 TINAGQ9UJW2 476 aa10.92□□□□□ -0.66
DDX55-210ENST00000543016 SLC5A6Q9Y289 635 aa10.92□□□□□ -0.66
DDX55-210ENST00000543016 FAM215AQ9Y5M1 114 aa10.92□□□□□ -0.66
DDX55-210ENST00000543016 A0A1W2PNR3 127 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 ZC3H12DA2A288 527 aaKnown RBP10.91□□□□□ -0.66
DDX55-210ENST00000543016 HSPB2A8KAH6 182 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 H0YC42 278 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 J3KTA2 159 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 CCL21O00585 134 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 RCBTB2O95199 551 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 GADD45GO95257 159 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 IL2RAP01589 272 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 MT-ND1P03886 318 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 OPN1LWP04000 364 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 GLI4P10075 376 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 GTF2E2P29084 291 aaKnown RBP10.91□□□□□ -0.66
DDX55-210ENST00000543016 IFNGR2P38484 337 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 SMSP52788 366 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 TPD52P55327 224 aaPredicted RBP10.91□□□□□ -0.66
DDX55-210ENST00000543016 CTBP2P56545 445 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 NUP107P57740 925 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 OR2B6P58173 313 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 H3F3AP84243 136 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 PON3Q15166 354 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 HSPB2Q16082 182 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 ZNF239Q16600 458 aaKnown RBP10.91□□□□□ -0.66
DDX55-210ENST00000543016 ANKDD1AQ495B1 522 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 RTL6Q6ICC9 239 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 OR2T5Q6IEZ7 315 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 RPTNQ6XPR3 784 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 ZNF730Q6ZMV8 503 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 MBOAT2Q6ZWT7 520 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 MAMDC2Q7Z304 686 aaPredicted RBP10.91□□□□□ -0.66
DDX55-210ENST00000543016 NKAIN4Q8IVV8 208 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 CDK20Q8IZL9 346 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 ADPRHL1Q8NDY3 354 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 OR2T29Q8NH02 315 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 PIGXQ8TBF5 258 aa10.91□□□□□ -0.66
DDX55-210ENST00000543016 LIPHQ8WWY8 451 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms