RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 APOBEC3AP31941 199 aaPredicted RBP15.27■□□□□ 0.04
PPP1CA-210ENST00000542876 SLC1A3P43003 542 aa15.27■□□□□ 0.04
PPP1CA-210ENST00000542876 EFNA4P52798 201 aa15.27■□□□□ 0.04
PPP1CA-210ENST00000542876 FOXG1P55316 489 aaPredicted RBP15.27■□□□□ 0.04
PPP1CA-210ENST00000542876 PRPS1P60891 318 aa15.27■□□□□ 0.04
PPP1CA-210ENST00000542876 VSNL1P62760 191 aa15.27■□□□□ 0.04
PPP1CA-210ENST00000542876 VLDLRP98155 873 aa15.27■□□□□ 0.04
PPP1CA-210ENST00000542876 PAQR6Q6TCH4 344 aa15.27■□□□□ 0.04
PPP1CA-210ENST00000542876 ABHD12BQ7Z5M8 362 aaPredicted RBP15.27■□□□□ 0.04
PPP1CA-210ENST00000542876 LRRC34Q8IZ02 419 aa15.27■□□□□ 0.04
PPP1CA-210ENST00000542876 WDR31Q8NA23 367 aa15.27■□□□□ 0.04
PPP1CA-210ENST00000542876 WDR60Q8WVS4 1066 aa15.27■□□□□ 0.04
PPP1CA-210ENST00000542876 CCDC115Q96NT0 180 aa15.27■□□□□ 0.04
PPP1CA-210ENST00000542876 PANX1Q96RD7 426 aa15.27■□□□□ 0.04
PPP1CA-210ENST00000542876 AMBRA1Q9C0C7 1298 aa15.27■□□□□ 0.04
PPP1CA-210ENST00000542876 MTHFD2LQ9H903 347 aaPredicted RBP15.27■□□□□ 0.04
PPP1CA-210ENST00000542876 SLC7A10Q9NS82 523 aa15.27■□□□□ 0.04
PPP1CA-210ENST00000542876 BTNL2Q9UIR0 455 aa15.27■□□□□ 0.04
PPP1CA-210ENST00000542876 CR1P17927 2039 aa15.27■□□□□ 0.03
PPP1CA-210ENST00000542876 PLCE1Q9P212 2302 aa15.27■□□□□ 0.03
PPP1CA-210ENST00000542876 A0A096LNT2 108 aa15.26■□□□□ 0.03
PPP1CA-210ENST00000542876 TMEM72A0PK05 275 aa15.26■□□□□ 0.03
PPP1CA-210ENST00000542876 CFAP73A6NFT4 308 aa15.26■□□□□ 0.03
PPP1CA-210ENST00000542876 CCDC154A6NI56 674 aa15.26■□□□□ 0.03
PPP1CA-210ENST00000542876 PDLIM1O00151 329 aa15.26■□□□□ 0.03
PPP1CA-210ENST00000542876 KRT33AO76009 404 aa15.26■□□□□ 0.03
PPP1CA-210ENST00000542876 GPIP06744 558 aa15.26■□□□□ 0.03
PPP1CA-210ENST00000542876 NR2F1P10589 423 aa15.26■□□□□ 0.03
PPP1CA-210ENST00000542876 IMPDH2P12268 514 aa15.26■□□□□ 0.03
PPP1CA-210ENST00000542876 CXCR1P25024 350 aa15.26■□□□□ 0.03
PPP1CA-210ENST00000542876 MPGP29372 298 aa15.26■□□□□ 0.03
PPP1CA-210ENST00000542876 SLC1A6P48664 564 aa15.26■□□□□ 0.03
PPP1CA-210ENST00000542876 SLC17A1Q14916 467 aa15.26■□□□□ 0.03
PPP1CA-210ENST00000542876 SYPL1Q16563 259 aa15.26■□□□□ 0.03
PPP1CA-210ENST00000542876 KRT71Q3SY84 523 aa15.26■□□□□ 0.03
PPP1CA-210ENST00000542876 OTUD3Q5T2D3 398 aaPredicted RBP15.26■□□□□ 0.03
PPP1CA-210ENST00000542876 TSPO2Q5TGU0 170 aa15.26■□□□□ 0.03
PPP1CA-210ENST00000542876 CYB5R2Q6BCY4 276 aa15.26■□□□□ 0.03
PPP1CA-210ENST00000542876 LRRC74BQ6ZQY2 392 aa15.26■□□□□ 0.03
PPP1CA-210ENST00000542876 PHC2Q8IXK0 858 aa15.26■□□□□ 0.03
PPP1CA-210ENST00000542876 ZNF440Q8IYI8 595 aa15.26■□□□□ 0.03
PPP1CA-210ENST00000542876 ANKFN1Q8N957 763 aa15.26■□□□□ 0.03
PPP1CA-210ENST00000542876 PROX1Q92786 737 aa15.26■□□□□ 0.03
PPP1CA-210ENST00000542876 NUF2Q9BZD4 464 aa15.26■□□□□ 0.03
PPP1CA-210ENST00000542876 LPAR3Q9UBY5 353 aa15.26■□□□□ 0.03
PPP1CA-210ENST00000542876 PRAMEF27A3QJZ7 478 aa15.25■□□□□ 0.03
PPP1CA-210ENST00000542876 FAAHO00519 579 aa15.25■□□□□ 0.03
PPP1CA-210ENST00000542876 RGS16O15492 202 aaPredicted RBP15.25■□□□□ 0.03
PPP1CA-210ENST00000542876 DBIP07108 87 aaKnown RBP15.25■□□□□ 0.03
PPP1CA-210ENST00000542876 CDH2P19022 906 aaPredicted RBP15.25■□□□□ 0.03
PPP1CA-210ENST00000542876 USF1P22415 310 aaPredicted RBP15.25■□□□□ 0.03
PPP1CA-210ENST00000542876 NME5P56597 212 aa15.25■□□□□ 0.03
PPP1CA-210ENST00000542876 PLAURQ03405 335 aa15.25■□□□□ 0.03
PPP1CA-210ENST00000542876 LRRC74AQ0VAA2 488 aa15.25■□□□□ 0.03
PPP1CA-210ENST00000542876 GSTA3Q16772 222 aa15.25■□□□□ 0.03
PPP1CA-210ENST00000542876 ZNF621Q6ZSS3 439 aa15.25■□□□□ 0.03
PPP1CA-210ENST00000542876 AAED1Q7RTV5 226 aa15.25■□□□□ 0.03
PPP1CA-210ENST00000542876 PEX5LQ8IYB4 626 aa15.25■□□□□ 0.03
PPP1CA-210ENST00000542876 POMGNT2Q8NAT1 580 aa15.25■□□□□ 0.03
PPP1CA-210ENST00000542876 C10orf105Q8TEF2 133 aa15.25■□□□□ 0.03
PPP1CA-210ENST00000542876 TMEM45BQ96B21 275 aa15.25■□□□□ 0.03
PPP1CA-210ENST00000542876 KCNS3Q9BQ31 491 aa15.25■□□□□ 0.03
PPP1CA-210ENST00000542876 TMEM109Q9BVC6 243 aa15.25■□□□□ 0.03
PPP1CA-210ENST00000542876 SF3B5Q9BWJ5 86 aaKnown RBP15.25■□□□□ 0.03
PPP1CA-210ENST00000542876 SHARPINQ9H0F6 387 aa15.25■□□□□ 0.03
PPP1CA-210ENST00000542876 SLC38A1Q9H2H9 487 aa15.25■□□□□ 0.03
PPP1CA-210ENST00000542876 TMEM160Q9NX00 188 aa15.25■□□□□ 0.03
PPP1CA-210ENST00000542876 FKBP7Q9Y680 259 aa15.25■□□□□ 0.03
PPP1CA-210ENST00000542876 ZC3H12DA2A288 527 aaKnown RBP15.24■□□□□ 0.03
PPP1CA-210ENST00000542876 ATP6V1G2-DDX39BF2Z307 99 aa15.24■□□□□ 0.03
PPP1CA-210ENST00000542876 TM9SF1O15321 606 aa15.24■□□□□ 0.03
PPP1CA-210ENST00000542876 PHF1O43189 567 aaPredicted RBP15.24■□□□□ 0.03
PPP1CA-210ENST00000542876 F12P00748 615 aaPredicted RBP15.24■□□□□ 0.03
PPP1CA-210ENST00000542876 CHRM4P08173 479 aa15.24■□□□□ 0.03
PPP1CA-210ENST00000542876 COPZ1P61923 177 aa15.24■□□□□ 0.03
PPP1CA-210ENST00000542876 EPS8Q12929 822 aa15.24■□□□□ 0.03
PPP1CA-210ENST00000542876 CEACAM7Q14002 265 aa15.24■□□□□ 0.03
PPP1CA-210ENST00000542876 OR7A5Q15622 319 aa15.24■□□□□ 0.03
PPP1CA-210ENST00000542876 MRPL2Q5T653 305 aaKnown RBP15.24■□□□□ 0.03
PPP1CA-210ENST00000542876 TMEM225Q6GV28 225 aa15.24■□□□□ 0.03
PPP1CA-210ENST00000542876 GPAT4Q86UL3 456 aa15.24■□□□□ 0.03
PPP1CA-210ENST00000542876 OR9K2Q8NGE7 335 aa15.24■□□□□ 0.03
PPP1CA-210ENST00000542876 AENQ8WTP8 325 aaKnown RBP15.24■□□□□ 0.03
PPP1CA-210ENST00000542876 FBXO17Q96EF6 278 aa15.24■□□□□ 0.03
PPP1CA-210ENST00000542876 OR52E6Q96RD3 313 aa15.24■□□□□ 0.03
PPP1CA-210ENST00000542876 ZBTB18Q99592 522 aa15.24■□□□□ 0.03
PPP1CA-210ENST00000542876 TAPBPLQ9BX59 468 aa15.24■□□□□ 0.03
PPP1CA-210ENST00000542876 PRDM4Q9UKN5 801 aa15.24■□□□□ 0.03
PPP1CA-210ENST00000542876 AKR7A3O95154 331 aa15.23■□□□□ 0.03
PPP1CA-210ENST00000542876 KRT75O95678 551 aa15.23■□□□□ 0.03
PPP1CA-210ENST00000542876 PDLIM4P50479 330 aa15.23■□□□□ 0.03
PPP1CA-210ENST00000542876 UFM1P61960 85 aa15.23■□□□□ 0.03
PPP1CA-210ENST00000542876 SLC25A3Q00325 362 aa15.23■□□□□ 0.03
PPP1CA-210ENST00000542876 STX3Q13277 289 aa15.23■□□□□ 0.03
PPP1CA-210ENST00000542876 TMEM99Q8N816 258 aa15.23■□□□□ 0.03
PPP1CA-210ENST00000542876 PNPT1Q8TCS8 783 aaKnown RBP15.23■□□□□ 0.03
PPP1CA-210ENST00000542876 SORT1Q99523 831 aa15.23■□□□□ 0.03
PPP1CA-210ENST00000542876 C20orf27Q9GZN8 174 aa15.23■□□□□ 0.03
PPP1CA-210ENST00000542876 PIF1Q9H611 641 aa15.23■□□□□ 0.03
PPP1CA-210ENST00000542876 MEAF6Q9HAF1 191 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms