RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 SLC29A4Q7RTT9 530 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 FAM122BQ7Z309 247 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 LYSMD2Q8IV50 215 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 APCDD1LQ8NCL9 501 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 SDR9C7Q8NEX9 313 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 ZPLD1Q8TCW7 415 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 ZNRF4Q8WWF5 429 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 ASB15Q8WXK1 588 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 NAT6Q93015 286 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 C1GALT1C1Q96EU7 318 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 WDR77Q9BQA1 342 aaPredicted RBP12.91□□□□□ -0.34
LDB3-207ENST00000542786 KATNB1Q9BVA0 655 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 GAREM1Q9H706 876 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 BABAM2Q9NXR7 383 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 ETAA1Q9NY74 926 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 IDSB3KWA1 339 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 E9PI62 339 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 IMPA2O14732 288 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 LAMTOR5O43504 91 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 IDH3BO43837 385 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 MRPL3P09001 348 aaKnown RBP12.91□□□□□ -0.34
LDB3-207ENST00000542786 CELP19835 753 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 TACR3P29371 465 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 SIGLEC14Q08ET2 396 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 TOMM34Q15785 309 aaPredicted RBP12.91□□□□□ -0.34
LDB3-207ENST00000542786 FAAH2Q6GMR7 532 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 RFLNBQ8N5W9 214 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 EXD3Q8N9H8 876 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 OR10H4Q8NGA5 316 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 SMPDL3BQ92485 455 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 TBX5Q99593 518 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 MIXL1Q9H2W2 232 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 DAPK2Q9UIK4 370 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 V9GYH0 126 aa12.91□□□□□ -0.34
LDB3-207ENST00000542786 DAPL1A0PJW8 107 aa12.9□□□□□ -0.34
LDB3-207ENST00000542786 PATE3B3GLJ2 98 aa12.9□□□□□ -0.34
LDB3-207ENST00000542786 GABRPO00591 440 aa12.9□□□□□ -0.34
LDB3-207ENST00000542786 ZNF354AO60765 605 aaPredicted RBP12.9□□□□□ -0.34
LDB3-207ENST00000542786 SCRG1O75711 98 aa12.9□□□□□ -0.34
LDB3-207ENST00000542786 SNX4O95219 450 aa12.9□□□□□ -0.34
LDB3-207ENST00000542786 APEHP13798 732 aaKnown RBP12.9□□□□□ -0.34
LDB3-207ENST00000542786 DIO1P49895 249 aa12.9□□□□□ -0.34
LDB3-207ENST00000542786 PRPS1P60891 318 aa12.9□□□□□ -0.34
LDB3-207ENST00000542786 RNF4P78317 190 aa12.9□□□□□ -0.34
LDB3-207ENST00000542786 PSPHP78330 225 aa12.9□□□□□ -0.34
LDB3-207ENST00000542786 POU4F2Q12837 409 aa12.9□□□□□ -0.34
LDB3-207ENST00000542786 INSL4Q14641 139 aa12.9□□□□□ -0.34
LDB3-207ENST00000542786 ZNF181Q2M3W8 571 aa12.9□□□□□ -0.34
LDB3-207ENST00000542786 LCN10Q6JVE6 187 aa12.9□□□□□ -0.34
LDB3-207ENST00000542786 PLEKHG7Q6ZR37 379 aa12.9□□□□□ -0.34
LDB3-207ENST00000542786 SSX6Q7RTT6 188 aa12.9□□□□□ -0.34
LDB3-207ENST00000542786 OVCH1Q7RTY7 1134 aa12.9□□□□□ -0.34
LDB3-207ENST00000542786 MINDY2Q8NBR6 621 aa12.9□□□□□ -0.34
LDB3-207ENST00000542786 FAM98AQ8NCA5 519 aaKnown RBP12.9□□□□□ -0.34
LDB3-207ENST00000542786 FAM83FQ8NEG4 500 aaPredicted RBP12.9□□□□□ -0.34
LDB3-207ENST00000542786 SMAP2Q8WU79 429 aaPredicted RBP12.9□□□□□ -0.34
LDB3-207ENST00000542786 RNF138Q8WVD3 245 aa12.9□□□□□ -0.34
LDB3-207ENST00000542786 TP53INP1Q96A56 240 aa12.9□□□□□ -0.34
LDB3-207ENST00000542786 KTI12Q96EK9 354 aaPredicted RBP12.9□□□□□ -0.34
LDB3-207ENST00000542786 RARRES3Q9UL19 164 aa12.9□□□□□ -0.34
LDB3-207ENST00000542786 TRAPPC4Q9Y296 219 aa12.9□□□□□ -0.34
LDB3-207ENST00000542786 PCDHGB6Q9Y5F9 930 aa12.9□□□□□ -0.34
LDB3-207ENST00000542786 ADAMTS9Q9P2N4 1935 aa12.9□□□□□ -0.34
LDB3-207ENST00000542786 TECTAO75443 2155 aa12.9□□□□□ -0.35
LDB3-207ENST00000542786 A0A1W2PQL4 384 aaPredicted RBP12.89□□□□□ -0.35
LDB3-207ENST00000542786 ISPDA4D126 451 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 OR6C68A6NDL8 312 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 OR6C70A6NIJ9 312 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 TMEM200CA6NKL6 621 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 DVL2O14641 736 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 RNF13O43567 381 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 HCRTR2O43614 444 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 ALOX12BO75342 701 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 TXNDC12O95881 172 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 CFIP05156 583 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 HOXD12P35452 270 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 AQP2P41181 271 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 RPS7P62081 194 aaKnown RBP12.89□□□□□ -0.35
LDB3-207ENST00000542786 ERVK-25P63136 954 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 ACTC1P68032 377 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 ACTA1P68133 377 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 HNRNPA0Q13151 305 aaKnown RBP12.89□□□□□ -0.35
LDB3-207ENST00000542786 TRIM16LQ309B1 348 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 STEAP3Q658P3 488 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 OR5W2Q8NH69 310 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 ABTB1Q969K4 478 aaPredicted RBP12.89□□□□□ -0.35
LDB3-207ENST00000542786 RASD2Q96D21 266 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 ZMYND19Q96E35 227 aaPredicted RBP12.89□□□□□ -0.35
LDB3-207ENST00000542786 SPSB2Q99619 263 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 LPAR4Q99677 370 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 SLC30A2Q9BRI3 323 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 TMED9Q9BVK6 235 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 APMAPQ9HDC9 416 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 POLHQ9Y253 713 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 EXPH5Q8NEV8 1989 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 C4orf47A7E2U8 309 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 B4DXG7 233 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 TBX1O43435 398 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 NDUFB5O43674 189 aa12.89□□□□□ -0.35
LDB3-207ENST00000542786 BGLAPP02818 100 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms