RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 HOXD3P31249 432 aaPredicted RBP4.02□□□□□ -1.77
MDM2-228ENST00000542502 FRKP42685 505 aaPredicted RBP4.02□□□□□ -1.77
MDM2-228ENST00000542502 PPICP45877 212 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 TRPC1P48995 793 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 CCR9P51686 369 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 NCBP2P52298 156 aaKnown RBP eCLIP4.02□□□□□ -1.77
MDM2-228ENST00000542502 POLR2JP52435 117 aaKnown RBP4.02□□□□□ -1.77
MDM2-228ENST00000542502 HNRNPFP52597 415 aaKnown RBP4.02□□□□□ -1.77
MDM2-228ENST00000542502 CDH15P55291 814 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 KCNK10P57789 538 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 RPS18P62269 152 aaKnown RBP4.02□□□□□ -1.77
MDM2-228ENST00000542502 OLR1P78380 273 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 BTG2P78543 158 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 FUT7Q11130 342 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 MFAP5Q13361 173 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 SNTA1Q13424 505 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 SQLEQ14534 574 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 INAQ16352 499 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 SYT16Q17RD7 645 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 ZSWIM7Q19AV6 140 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 COQ5Q5HYK3 327 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 ACER2Q5QJU3 275 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 FAM69AQ5T7M9 428 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 C18orf63Q68DL7 685 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 LCN10Q6JVE6 187 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 PRSS57Q6UWY2 283 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 SHISA6Q6ZSJ9 500 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 SPATA21Q7Z572 469 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 RPS19BP1Q86WX3 136 aaKnown RBP4.02□□□□□ -1.77
MDM2-228ENST00000542502 TICAM1Q8IUC6 712 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 RIMKLAQ8IXN7 391 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 RNF175Q8N4F7 328 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 CPSF7Q8N684 471 aaKnown RBP4.02□□□□□ -1.77
MDM2-228ENST00000542502 CDRT4Q8N9R6 151 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 TMEM178AQ8NBL3 297 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 SETD9Q8NE22 299 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 OR2T11Q8NH01 316 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 CDC26Q8NHZ8 85 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 NFKBIDQ8NI38 313 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 PSMA8Q8TAA3 256 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 C9orf43Q8TAL5 461 aaPredicted RBP4.02□□□□□ -1.77
MDM2-228ENST00000542502 SFXN5Q8TD22 340 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 PTPMT1Q8WUK0 201 aaPredicted RBP4.02□□□□□ -1.77
MDM2-228ENST00000542502 CNOT9Q92600 299 aaKnown RBP4.02□□□□□ -1.77
MDM2-228ENST00000542502 HAS2Q92819 552 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 EXOSC8Q96B26 276 aaKnown RBP4.02□□□□□ -1.77
MDM2-228ENST00000542502 CMTM5Q96DZ9 223 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 ITCHQ96J02 903 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 C3orf30Q96M34 536 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 ZNF681Q96N22 645 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 AMDHD1Q96NU7 426 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 TSSK3Q96PN8 268 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 ZNF317Q96PQ6 595 aaPredicted RBP4.02□□□□□ -1.77
MDM2-228ENST00000542502 SECISBP2Q96T21 854 aaKnown RBP4.02□□□□□ -1.77
MDM2-228ENST00000542502 UTP23Q9BRU9 249 aaKnown RBP4.02□□□□□ -1.77
MDM2-228ENST00000542502 CADM1Q9BY67 442 aaKnown RBP4.02□□□□□ -1.77
MDM2-228ENST00000542502 OR8D2Q9GZM6 311 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 C20orf27Q9GZN8 174 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 CLMPQ9H6B4 373 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 ZNF160Q9HCG1 818 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 SLCO1B3Q9NPD5 702 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 DDX18Q9NVP1 670 aaKnown RBP4.02□□□□□ -1.77
MDM2-228ENST00000542502 AIG1Q9NVV5 245 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 PPP1R14DQ9NXH3 145 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 GIN1Q9NXP7 522 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 STMN3Q9NZ72 180 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 CNIH4Q9P003 139 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 MARCOQ9UEW3 520 aaPredicted RBP4.02□□□□□ -1.77
MDM2-228ENST00000542502 BTNL2Q9UIR0 455 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 FAF1Q9UNN5 650 aaPredicted RBP4.02□□□□□ -1.77
MDM2-228ENST00000542502 OSGIN2Q9Y236 505 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 POLR3HQ9Y535 204 aaPredicted RBP4.02□□□□□ -1.77
MDM2-228ENST00000542502 ZFHX4Q86UP3 3567 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 COL6A6A6NMZ7 2263 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 MED13Q9UHV7 2174 aa4.02□□□□□ -1.77
MDM2-228ENST00000542502 TRAV17A0A0B4J275 112 aa4.01□□□□□ -1.77
MDM2-228ENST00000542502 TRBV11-1A0A0K0K1C0 115 aa4.01□□□□□ -1.77
MDM2-228ENST00000542502 C2orf92A0A1B0GVN3 265 aa4.01□□□□□ -1.77
MDM2-228ENST00000542502 A0A1W2PP18 115 aa4.01□□□□□ -1.77
MDM2-228ENST00000542502 ARGFXA6NJG6 315 aa4.01□□□□□ -1.77
MDM2-228ENST00000542502 GLOD5A6NK44 160 aa4.01□□□□□ -1.77
MDM2-228ENST00000542502 EIF4E1BA6NMX2 242 aaKnown RBP4.01□□□□□ -1.77
MDM2-228ENST00000542502 A8MUI8 341 aa4.01□□□□□ -1.77
MDM2-228ENST00000542502 EVPLLA8MZ36 301 aa4.01□□□□□ -1.77
MDM2-228ENST00000542502 KLRC4-KLRK1H3BQV0 150 aa4.01□□□□□ -1.77
MDM2-228ENST00000542502 RFXANKO14593 260 aa4.01□□□□□ -1.77
MDM2-228ENST00000542502 ZNF195O14628 629 aa4.01□□□□□ -1.77
MDM2-228ENST00000542502 TSPAN4O14817 238 aa4.01□□□□□ -1.77
MDM2-228ENST00000542502 ANGPT2O15123 496 aa4.01□□□□□ -1.77
MDM2-228ENST00000542502 TO15178 435 aa4.01□□□□□ -1.77
MDM2-228ENST00000542502 JRKO75564 520 aa4.01□□□□□ -1.77
MDM2-228ENST00000542502 ANP32DO95626 131 aa4.01□□□□□ -1.77
MDM2-228ENST00000542502 DDAH2O95865 285 aa4.01□□□□□ -1.77
MDM2-228ENST00000542502 FAM107AO95990 144 aa4.01□□□□□ -1.77
MDM2-228ENST00000542502 IGKV3-11P04433 115 aa4.01□□□□□ -1.77
MDM2-228ENST00000542502 CHRM4P08173 479 aa4.01□□□□□ -1.77
MDM2-228ENST00000542502 GUSBP08236 651 aa4.01□□□□□ -1.77
MDM2-228ENST00000542502 UQCRC2P22695 453 aa4.01□□□□□ -1.77
MDM2-228ENST00000542502 FEN1P39748 380 aaKnown RBP4.01□□□□□ -1.77
MDM2-228ENST00000542502 CYB561P49447 251 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms