RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 TMEM200AQ86VY9 491 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 SLC15A3Q8IY34 581 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 MICU2Q8IYU8 434 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 ELOA3Q8NG57 546 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 OR2T12Q8NG77 320 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 OR6T1Q8NGN1 323 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 VANGL1Q8TAA9 524 aaPredicted RBP8.21□□□□□ -1.1
SNHG1-215ENST00000540904 PIGXQ8TBF5 258 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 FAM222BQ8WU58 562 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 LRRC37BQ96QE4 947 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 CCT8L2Q96SF2 557 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 MCHR1Q99705 422 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 HOPXQ9BPY8 73 aaPredicted RBP8.21□□□□□ -1.1
SNHG1-215ENST00000540904 TACO1Q9BSH4 297 aaKnown RBP8.21□□□□□ -1.1
SNHG1-215ENST00000540904 POTEKPQ9BYX7 375 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 TRIM2Q9C040 744 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 KLHL4Q9C0H6 718 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 EVA1AQ9H8M9 152 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 BCO1Q9HAY6 547 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 TMEM27Q9HBJ8 222 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 MCCC2Q9HCC0 563 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 ADPRHL2Q9NX46 363 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 CMTM6Q9NX76 183 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 EMC3Q9P0I2 261 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 NDRG3Q9UGV2 375 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 ING1Q9UK53 422 aaPredicted RBP8.21□□□□□ -1.1
SNHG1-215ENST00000540904 AP3M1Q9Y2T2 418 aa8.21□□□□□ -1.1
SNHG1-215ENST00000540904 UNC79Q9P2D8 2635 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 ELOVL7A1L3X0 281 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 SH3D21A4FU49 640 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 LIPT2A6NK58 231 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 ZNF724A8MTY0 619 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 TMEM229AB2RXF0 380 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 C16orf97H3BN30 126 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 TPST2O60704 377 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 EIF1BO60739 113 aaKnown RBP8.2□□□□□ -1.1
SNHG1-215ENST00000540904 DCTN3O75935 186 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 AKR7A3O95154 331 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 AHSA1O95433 338 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 IFNA14P01570 189 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 C8BP07358 591 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 PNMTP11086 282 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 EPXP11678 715 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 CD247P20963 164 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 PTNP21246 168 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 PRDX6P30041 224 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 CCKARP32238 428 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 RPS5P46782 204 aaKnown RBP8.2□□□□□ -1.1
SNHG1-215ENST00000540904 H3F3AP84243 136 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 NRF1Q16656 503 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 OTUD3Q5T2D3 398 aaPredicted RBP8.2□□□□□ -1.1
SNHG1-215ENST00000540904 FBXW10Q5XX13 1052 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 ANKRD34AQ69YU3 496 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 C8orf82Q6P1X6 216 aaPredicted RBP8.2□□□□□ -1.1
SNHG1-215ENST00000540904 ULK3Q6PHR2 472 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 PAQR6Q6TCH4 344 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 C6orf89Q6UWU4 347 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 TFAP2EQ6VUC0 442 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 BEND4Q6ZU67 534 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.2□□□□□ -1.1
SNHG1-215ENST00000540904 GALNT5Q7Z7M9 940 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 RBM45Q8IUH3 476 aaKnown RBP8.2□□□□□ -1.1
SNHG1-215ENST00000540904 P3H2Q8IVL5 708 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 OR4D11Q8NGI4 311 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 STK35Q8TDR2 534 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 DNAJA4Q8WW22 397 aaPredicted RBP8.2□□□□□ -1.1
SNHG1-215ENST00000540904 RASSF5Q8WWW0 418 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 PROX1Q92786 737 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 SLC25A36Q96CQ1 311 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 KTI12Q96EK9 354 aaPredicted RBP8.2□□□□□ -1.1
SNHG1-215ENST00000540904 SLC47A1Q96FL8 570 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 DACH2Q96NX9 599 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 WFIKKN1Q96NZ8 548 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 ARHGDIGQ99819 225 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 NAA11Q9BSU3 229 aaPredicted RBP8.2□□□□□ -1.1
SNHG1-215ENST00000540904 MED18Q9BUE0 208 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 TAPBPLQ9BX59 468 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 C12orf10Q9HB07 376 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 GMPR2Q9P2T1 348 aaKnown RBP8.2□□□□□ -1.1
SNHG1-215ENST00000540904 SLC9A8Q9Y2E8 581 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 NOSIPQ9Y314 301 aaKnown RBP8.2□□□□□ -1.1
SNHG1-215ENST00000540904 SH3GLB1Q9Y371 365 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 HCFC1P51610 2035 aa8.2□□□□□ -1.1
SNHG1-215ENST00000540904 CELSR2Q9HCU4 2923 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 IGKV1D-42A0A075B6H8 117 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 IGKV3D-15A0A087WSY6 115 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 A0A0B4J2E0 115 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 A0A1B0GX12 115 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 CPSF4LA6NMK7 179 aaKnown RBP8.19□□□□□ -1.1
SNHG1-215ENST00000540904 A6NNC1 897 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 ZNF716A6NP11 495 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 NME4O00746 187 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 GPR171O14626 319 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 CASKO14936 926 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 GSTA4O15217 222 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 SHOX2O60902 331 aaPredicted RBP8.19□□□□□ -1.1
SNHG1-215ENST00000540904 NPIPB7O75200 414 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 CTAG2O75638 210 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 FAM107AO95990 144 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 TNFRSF1BP20333 461 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms