RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 TRBC2A0A5B9 178 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 UBE2QL1A1L167 161 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 NAP1L6A6NFF2 107 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 IFITM10A6NMD0 228 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 CHST10O43529 356 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 RNF13O43567 381 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 YIF1AO95070 293 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 APBB3O95704 486 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 VSIG10L2P0DP72 767 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 EPXP11678 715 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 OPRD1P41143 372 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 STAT5AP42229 794 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 LIM2P55344 173 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 PKIAP61925 76 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 IL10RAQ13651 578 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 SCARB2Q14108 478 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 USF2Q15853 346 aaPredicted RBP8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 ZNF805Q5CZA5 627 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 FAAP20Q6NZ36 180 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 ZNF783Q6ZMS7 281 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 ZNF813Q6ZN06 617 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 OR2AK2Q8NG84 335 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 WFDC5Q8TCV5 224 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 DTD1Q8TEA8 209 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 SMARCD2Q92925 531 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 GCDHQ92947 438 aaPredicted RBP8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 ARL11Q969Q4 196 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 MYADMQ96S97 322 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 ORAI3Q9BRQ5 295 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 UTP23Q9BRU9 249 aaKnown RBP8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 ZNF471Q9BX82 626 aaPredicted RBP8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 ZDHHC5Q9C0B5 715 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 LAT2Q9GZY6 243 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 PRO1933Q9H354 126 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 MVB12BQ9H7P6 319 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 DUSP22Q9NRW4 184 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 CORO2BQ9UQ03 480 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 MYO10Q9HD67 2058 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 TRAV14DV4A0A0A6YYC5 116 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 A6NLC8 198 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 IQCF5A8MTL0 148 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 MCIDASD6RGH6 385 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 SCAMP2O15127 329 aaKnown RBP8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 CTDSPLO15194 276 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 HYAL3O43820 417 aaPredicted RBP8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 GJB3O75712 270 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 IFNW1P05000 195 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 SNRPBP14678 240 aaKnown RBP8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 CPT2P23786 658 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 PMELP40967 661 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 AKR1C3P42330 323 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 HNRNPKP61978 463 aaKnown RBP eCLIP8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 EFNB1P98172 346 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 SEMG2Q02383 582 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 ACSM1Q08AH1 577 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 SURF2Q15527 256 aaPredicted RBP8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 OR8G1Q15617 311 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 CSRP2Q16527 193 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 PRPF38BQ5VTL8 546 aaKnown RBP8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 TANGO2Q6ICL3 276 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 PGBD2Q6P3X8 592 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 CLEC9AQ6UXN8 241 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 TECPR1Q7Z6L1 1165 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 SYT12Q8IV01 421 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 HORMAD2Q8N7B1 307 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 HJURPQ8NCD3 748 aaPredicted RBP8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 OR10J5Q8NHC4 309 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 EGFL8Q99944 293 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 SPON2Q9BUD6 331 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 TRMT61BQ9BVS5 477 aaKnown RBP8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 CHST5Q9GZS9 411 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 SEMA6CQ9H3T2 930 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 LHX9Q9NQ69 397 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 RCC2Q9P258 522 aaKnown RBP8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 GPR52Q9Y2T5 361 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 BLOC1S5-TXNDC5H3BN57 136 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 RHOCP08134 193 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 PPIBP23284 216 aaKnown RBP8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 ELAVL4P26378 380 aaKnown RBP8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 ADH6P28332 368 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 HOXD9P28356 352 aaPredicted RBP8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 GIPRP48546 466 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 GNG10P50151 68 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 RENBPP51606 427 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 MECP2P51608 486 aaKnown RBP8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 YBEYP58557 167 aaPredicted RBP8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 HGFACQ04756 655 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 FOXO1Q12778 655 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 GAMTQ14353 236 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 GFOD2Q3B7J2 385 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 LY6G5CQ5SRR4 150 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 DCST1Q5T197 706 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 NOXRED1Q6NXP6 359 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 POMZP3Q6PJE2 187 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 TSSK4Q6SA08 328 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 CHST9Q7L1S5 443 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 C6orf120Q7Z4R8 191 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 LRRTM1Q86UE6 522 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 KCNRGQ8N5I3 272 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 OR8J2Q8NGG1 315 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms