RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 DNAJA1P31689 397 aaKnown RBP13.35□□□□□ -0.27
UBE3B-212ENST00000540230 PCGF2P35227 344 aa13.35□□□□□ -0.27
UBE3B-212ENST00000540230 IDUAP35475 653 aa13.35□□□□□ -0.27
UBE3B-212ENST00000540230 OR3A2P47893 321 aa13.35□□□□□ -0.27
UBE3B-212ENST00000540230 MAP2K6P52564 334 aa13.35□□□□□ -0.27
UBE3B-212ENST00000540230 EGR4Q05215 589 aa13.35□□□□□ -0.27
UBE3B-212ENST00000540230 OR7A5Q15622 319 aa13.35□□□□□ -0.27
UBE3B-212ENST00000540230 COQ5Q5HYK3 327 aa13.35□□□□□ -0.27
UBE3B-212ENST00000540230 FBXW10Q5XX13 1052 aa13.35□□□□□ -0.27
UBE3B-212ENST00000540230 CALHM3Q86XJ0 350 aa13.35□□□□□ -0.27
UBE3B-212ENST00000540230 ARMC8Q8IUR7 673 aa13.35□□□□□ -0.27
UBE3B-212ENST00000540230 TMEM99Q8N816 258 aa13.35□□□□□ -0.27
UBE3B-212ENST00000540230 RCN3Q96D15 328 aa13.35□□□□□ -0.27
UBE3B-212ENST00000540230 ZHX1-C8orf76Q96EF9 292 aa13.35□□□□□ -0.27
UBE3B-212ENST00000540230 ZNF607Q96SK3 696 aa13.35□□□□□ -0.27
UBE3B-212ENST00000540230 POTEKPQ9BYX7 375 aa13.35□□□□□ -0.27
UBE3B-212ENST00000540230 A8MVM7 634 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 M0R3H8 397 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 CASKO14936 926 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 AKR7A3O95154 331 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 ADAP00813 363 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 IGHV3-9P01782 118 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 CRYGSP22914 178 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 LOXP28300 417 aaPredicted RBP13.34□□□□□ -0.27
UBE3B-212ENST00000540230 ADSLP30566 484 aaPredicted RBP13.34□□□□□ -0.27
UBE3B-212ENST00000540230 SLC16A1P53985 500 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 RGS8P57771 180 aaPredicted RBP13.34□□□□□ -0.27
UBE3B-212ENST00000540230 SLC35A1P78382 337 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 CYLC2Q14093 348 aaPredicted RBP13.34□□□□□ -0.27
UBE3B-212ENST00000540230 PDK3Q15120 406 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 MAPRE2Q15555 327 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 VMACQ2NL98 169 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 TREML1Q86YW5 311 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 LSMEM1Q8N8F7 131 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 OR8J3Q8NGG0 315 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 OR4D11Q8NGI4 311 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 PIGXQ8TBF5 258 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 TAMM41Q96BW9 452 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 HS3ST6Q96QI5 342 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 ELAC2Q9BQ52 826 aaKnown RBP13.34□□□□□ -0.27
UBE3B-212ENST00000540230 TACO1Q9BSH4 297 aaKnown RBP13.34□□□□□ -0.27
UBE3B-212ENST00000540230 PTDSS2Q9BVG9 487 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 ACTR6Q9GZN1 396 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 PLEKHF2Q9H8W4 249 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 MRGBPQ9NV56 204 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 GMPR2Q9P2T1 348 aaKnown RBP13.34□□□□□ -0.27
UBE3B-212ENST00000540230 IGKV1D-42A0A075B6H8 117 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 PRORSD1PA6NEY8 169 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 SERPINB7O75635 380 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 CD247P20963 164 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 PTNP21246 168 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 P2RY4P51582 365 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 NPTX1Q15818 432 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 OTUD3Q5T2D3 398 aaPredicted RBP13.34□□□□□ -0.27
UBE3B-212ENST00000540230 C1orf140Q5VVS0 124 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 PAQR6Q6TCH4 344 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 C6orf89Q6UWU4 347 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 SPATA21Q7Z572 469 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 GALNT5Q7Z7M9 940 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 P3H2Q8IVL5 708 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 OR52E4Q8NGH9 312 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 S100PBPQ96BU1 408 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 KTI12Q96EK9 354 aaPredicted RBP13.34□□□□□ -0.27
UBE3B-212ENST00000540230 ARHGDIGQ99819 225 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 FAM107BQ9H098 131 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 ADPRHL2Q9NX46 363 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 SEC14L4Q9UDX3 406 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 TESQ9UGI8 421 aaKnown RBP13.34□□□□□ -0.27
UBE3B-212ENST00000540230 PRDM4Q9UKN5 801 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 GPR52Q9Y2T5 361 aa13.34□□□□□ -0.27
UBE3B-212ENST00000540230 NOSIPQ9Y314 301 aaKnown RBP13.34□□□□□ -0.27
UBE3B-212ENST00000540230 CCT8L1PA6NM43 557 aa13.33□□□□□ -0.28
UBE3B-212ENST00000540230 FTCDNL1E5RQL4 147 aa13.33□□□□□ -0.28
UBE3B-212ENST00000540230 SLC22A2O15244 555 aa13.33□□□□□ -0.28
UBE3B-212ENST00000540230 EIF1BO60739 113 aaKnown RBP13.33□□□□□ -0.28
UBE3B-212ENST00000540230 LYZL6O75951 148 aa13.33□□□□□ -0.28
UBE3B-212ENST00000540230 LGI1O95970 557 aa13.33□□□□□ -0.28
UBE3B-212ENST00000540230 GPIP06744 558 aa13.33□□□□□ -0.28
UBE3B-212ENST00000540230 DRD4P21917 467 aa13.33□□□□□ -0.28
UBE3B-212ENST00000540230 LSP1P33241 339 aa13.33□□□□□ -0.28
UBE3B-212ENST00000540230 IST1P53990 364 aa13.33□□□□□ -0.28
UBE3B-212ENST00000540230 FOXG1P55316 489 aaPredicted RBP13.33□□□□□ -0.28
UBE3B-212ENST00000540230 SLC17A1Q14916 467 aa13.33□□□□□ -0.28
UBE3B-212ENST00000540230 OR1Q1Q15612 314 aa13.33□□□□□ -0.28
UBE3B-212ENST00000540230 NRF1Q16656 503 aa13.33□□□□□ -0.28
UBE3B-212ENST00000540230 ALG10BQ5I7T1 473 aa13.33□□□□□ -0.28
UBE3B-212ENST00000540230 SFRP5Q5T4F7 317 aa13.33□□□□□ -0.28
UBE3B-212ENST00000540230 Q6ZT83 130 aa13.33□□□□□ -0.28
UBE3B-212ENST00000540230 TSPYL5Q86VY4 417 aaPredicted RBP13.33□□□□□ -0.28
UBE3B-212ENST00000540230 RBM45Q8IUH3 476 aaKnown RBP13.33□□□□□ -0.28
UBE3B-212ENST00000540230 STK35Q8TDR2 534 aa13.33□□□□□ -0.28
UBE3B-212ENST00000540230 PIK3IP1Q96FE7 263 aa13.33□□□□□ -0.28
UBE3B-212ENST00000540230 ZNF583Q96ND8 569 aa13.33□□□□□ -0.28
UBE3B-212ENST00000540230 ZNF226Q9NYT6 803 aa13.33□□□□□ -0.28
UBE3B-212ENST00000540230 EMC3Q9P0I2 261 aa13.33□□□□□ -0.28
UBE3B-212ENST00000540230 RPS6KB2Q9UBS0 482 aa13.33□□□□□ -0.28
UBE3B-212ENST00000540230 ST6GALNAC2Q9UJ37 374 aa13.33□□□□□ -0.28
UBE3B-212ENST00000540230 PLEKHA6Q9Y2H5 1048 aa13.33□□□□□ -0.28
UBE3B-212ENST00000540230 FLVCR1Q9Y5Y0 555 aa13.33□□□□□ -0.28
UBE3B-212ENST00000540230 A0A0B4J2E0 115 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms