RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 GPR18Q14330 331 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 P2RY14Q15391 338 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 NKAPLQ5M9Q1 402 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 FAM111BQ6SJ93 734 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 USP53Q70EK8 1073 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 PRSS45Q7RTY3 260 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 FAM160A2Q8N612 972 aaPredicted RBP9.25□□□□□ -0.93
TRAF1-202ENST00000540010 AMER3Q8N944 861 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 OR2T4Q8NH00 348 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 G6PC3Q9BUM1 346 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 MENTQ9BUN1 341 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 SDHAF3Q9NRP4 125 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 TRIOBPQ9H2D6 2365 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 TICRRQ7Z2Z1 1910 aa9.25□□□□□ -0.93
TRAF1-202ENST00000540010 A0A1W2PPL8 197 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 AGPAT2O15120 278 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 SC5DO75845 299 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 AIFM1O95831 613 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 GLULP15104 373 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 RAB2AP61019 212 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 CRMP1Q14194 572 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 BAK1Q16611 211 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 MPEG1Q2M385 716 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 SYT14P1Q58G82 188 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 SPIN3Q5JUX0 258 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 TMEM225Q6GV28 225 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 TMEM205Q6UW68 189 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 DGLUCYQ7Z3D6 616 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 SLC35F2Q8IXU6 374 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 PRR22Q8IZ63 422 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 SLC16A11Q8NCK7 471 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 LMX1AQ8TE12 382 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 FAM46BQ96A09 425 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 HS3ST3A1Q9Y663 406 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 IGKV1-8A0A0C4DH67 115 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 SLC9B1P1A6NJY1 282 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 UPK1AO00322 258 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 PRICKLE3O43900 615 aaPredicted RBP9.24□□□□□ -0.93
TRAF1-202ENST00000540010 ICMTO60725 284 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 RDH16O75452 317 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 RAB3DO95716 219 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 HOXC4P09017 264 aaPredicted RBP9.24□□□□□ -0.93
TRAF1-202ENST00000540010 SRFP11831 508 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 SPNP16150 400 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 HLA-DMAP28067 261 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 PSPHP78330 225 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 CCINQ13939 588 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 KIR2DS3Q14952 304 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 MRPL2Q5T653 305 aaKnown RBP9.24□□□□□ -0.93
TRAF1-202ENST00000540010 SLX4IPQ5VYV7 408 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 DHRS4L2Q6PKH6 230 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 LINC00299Q6ZSB3 139 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 SYT9Q86SS6 491 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 SIMC1Q8NDZ2 872 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 OR5T2Q8NGG2 359 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 MS4A6EQ96DS6 147 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 ALOXE3Q9BYJ1 711 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 SLIRPQ9GZT3 109 aaKnown RBP9.24□□□□□ -0.93
TRAF1-202ENST00000540010 ACTR10Q9NZ32 417 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 CPNE7Q9UBL6 633 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 DIMT1Q9UNQ2 313 aaKnown RBP9.24□□□□□ -0.93
TRAF1-202ENST00000540010 ASB4Q9Y574 426 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 AP1M2Q9Y6Q5 423 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 A8MVJ9 347 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 SGK494L7N484 410 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 HOXB9P17482 250 aaPredicted RBP9.24□□□□□ -0.93
TRAF1-202ENST00000540010 CD6P30203 668 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 GALEQ14376 348 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 OR1Q1Q15612 314 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 C3orf38Q5JPI3 329 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 ABHD17CQ6PCB6 329 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 PRICKLE2Q7Z3G6 844 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 ZNF283Q8N7M2 679 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 MFSD9Q8NBP5 474 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 GOT1L1Q8NHS2 421 aaPredicted RBP9.24□□□□□ -0.93
TRAF1-202ENST00000540010 TMEM255BQ8WV15 326 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 YIPF6Q96EC8 236 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 TNFRSF13CQ96RJ3 184 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 ZNF559Q9BR84 538 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 SERINC1Q9NRX5 453 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 ACSS1Q9NUB1 689 aaPredicted RBP9.24□□□□□ -0.93
TRAF1-202ENST00000540010 PARPBPQ9NWS1 579 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 APOBEC3BQ9UH17 382 aaKnown RBP9.24□□□□□ -0.93
TRAF1-202ENST00000540010 COPS3Q9UNS2 423 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 ATG4BQ9Y4P1 393 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 A3GALT2U3KPV4 340 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 V9GY05 133 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 A0A0A6YYC8 382 aaPredicted RBP9.24□□□□□ -0.93
TRAF1-202ENST00000540010 I3L1I5 382 aaPredicted RBP9.24□□□□□ -0.93
TRAF1-202ENST00000540010 PVALBP20472 110 aaPredicted RBP9.24□□□□□ -0.93
TRAF1-202ENST00000540010 XCR1P46094 333 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 TRA2BP62995 288 aaKnown RBP9.24□□□□□ -0.93
TRAF1-202ENST00000540010 GXYLT1Q4G148 440 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 COL13A1Q5TAT6 717 aaPredicted RBP9.24□□□□□ -0.93
TRAF1-202ENST00000540010 CARD17Q5XLA6 110 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 TCTN3Q6NUS6 607 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 GLCCI1Q86VQ1 547 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 NEURL3Q96EH8 262 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 TGM7Q96PF1 710 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 ZFYVE21Q9BQ24 234 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms