RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 PAQR6Q6TCH4 344 aa12.18□□□□□ -0.46
CD9-208ENST00000538834 STAC2Q6ZMT1 411 aa12.18□□□□□ -0.46
CD9-208ENST00000538834 TSPYL5Q86VY4 417 aaPredicted RBP12.18□□□□□ -0.46
CD9-208ENST00000538834 ARMC8Q8IUR7 673 aa12.18□□□□□ -0.46
CD9-208ENST00000538834 POU5F2Q8N7G0 328 aa12.18□□□□□ -0.46
CD9-208ENST00000538834 ANKS4BQ8N8V4 417 aa12.18□□□□□ -0.46
CD9-208ENST00000538834 DDIT4LQ96D03 193 aa12.18□□□□□ -0.46
CD9-208ENST00000538834 LURAP1Q96LR2 239 aa12.18□□□□□ -0.46
CD9-208ENST00000538834 DACH2Q96NX9 599 aa12.18□□□□□ -0.46
CD9-208ENST00000538834 PTDSS2Q9BVG9 487 aa12.18□□□□□ -0.46
CD9-208ENST00000538834 PIF1Q9H611 641 aa12.18□□□□□ -0.46
CD9-208ENST00000538834 KLHL9Q9P2J3 617 aa12.18□□□□□ -0.46
CD9-208ENST00000538834 ABCD2Q9UBJ2 740 aa12.18□□□□□ -0.46
CD9-208ENST00000538834 TESQ9UGI8 421 aaKnown RBP12.18□□□□□ -0.46
CD9-208ENST00000538834 PROCRQ9UNN8 238 aa12.18□□□□□ -0.46
CD9-208ENST00000538834 TESMINQ9Y4I5 508 aa12.18□□□□□ -0.46
CD9-208ENST00000538834 IGKV1D-42A0A075B6H8 117 aa12.17□□□□□ -0.46
CD9-208ENST00000538834 IGHV3-15A0A0B4J1V0 119 aa12.17□□□□□ -0.46
CD9-208ENST00000538834 A0A0B4J2E0 115 aa12.17□□□□□ -0.46
CD9-208ENST00000538834 A0A1B0GWA3 101 aa12.17□□□□□ -0.46
CD9-208ENST00000538834 A0A1B0GX12 115 aa12.17□□□□□ -0.46
CD9-208ENST00000538834 FAM220BPB1ANY3 271 aa12.17□□□□□ -0.46
CD9-208ENST00000538834 EIF1BO60739 113 aaKnown RBP12.17□□□□□ -0.46
CD9-208ENST00000538834 THY1P04216 161 aa12.17□□□□□ -0.46
CD9-208ENST00000538834 PSMB1P20618 241 aaKnown RBP12.17□□□□□ -0.46
CD9-208ENST00000538834 EDNRAP25101 427 aa12.17□□□□□ -0.46
CD9-208ENST00000538834 LOXP28300 417 aaPredicted RBP12.17□□□□□ -0.46
CD9-208ENST00000538834 AQP1P29972 269 aa12.17□□□□□ -0.46
CD9-208ENST00000538834 OR3A2P47893 321 aa12.17□□□□□ -0.46
CD9-208ENST00000538834 CTBP2P56545 445 aa12.17□□□□□ -0.46
CD9-208ENST00000538834 GNGT1P63211 74 aa12.17□□□□□ -0.46
CD9-208ENST00000538834 SLC35A1P78382 337 aa12.17□□□□□ -0.46
CD9-208ENST00000538834 TLE4Q04727 773 aa12.17□□□□□ -0.46
CD9-208ENST00000538834 RASGEF1BQ0VAM2 473 aa12.17□□□□□ -0.46
CD9-208ENST00000538834 BNIP2Q12982 314 aa12.17□□□□□ -0.46
CD9-208ENST00000538834 SLC17A1Q14916 467 aa12.17□□□□□ -0.46
CD9-208ENST00000538834 MMEL1Q495T6 779 aa12.17□□□□□ -0.46
CD9-208ENST00000538834 INTS11Q5TA45 600 aaKnown RBP12.17□□□□□ -0.46
CD9-208ENST00000538834 ERICH5Q6P6B1 374 aa12.17□□□□□ -0.46
CD9-208ENST00000538834 NHLRC1Q6VVB1 395 aa12.17□□□□□ -0.46
CD9-208ENST00000538834 BEND4Q6ZU67 534 aa12.17□□□□□ -0.46
CD9-208ENST00000538834 LINC01560Q8TB33 94 aa12.17□□□□□ -0.46
CD9-208ENST00000538834 DNAJA4Q8WW22 397 aaPredicted RBP12.17□□□□□ -0.46
CD9-208ENST00000538834 ZNF300Q96RE9 604 aaPredicted RBP12.17□□□□□ -0.46
CD9-208ENST00000538834 HOPXQ9BPY8 73 aaPredicted RBP12.17□□□□□ -0.46
CD9-208ENST00000538834 ZNF559Q9BR84 538 aa12.17□□□□□ -0.46
CD9-208ENST00000538834 PRR14Q9BWN1 585 aa12.17□□□□□ -0.46
CD9-208ENST00000538834 TRIM2Q9C040 744 aa12.17□□□□□ -0.46
CD9-208ENST00000538834 AP3M1Q9Y2T2 418 aa12.17□□□□□ -0.46
CD9-208ENST00000538834 A0A087WUJ7 227 aa12.16□□□□□ -0.46
CD9-208ENST00000538834 TUBAL3A6NHL2 446 aa12.16□□□□□ -0.46
CD9-208ENST00000538834 A6NNC1 897 aa12.16□□□□□ -0.46
CD9-208ENST00000538834 NME4O00746 187 aa12.16□□□□□ -0.46
CD9-208ENST00000538834 SIAH2O43255 324 aa12.16□□□□□ -0.46
CD9-208ENST00000538834 SHOX2O60902 331 aaPredicted RBP12.16□□□□□ -0.46
CD9-208ENST00000538834 SMNDC1O75940 238 aaKnown RBP eCLIP12.16□□□□□ -0.46
CD9-208ENST00000538834 CNOT4O95628 575 aaKnown RBP12.16□□□□□ -0.46
CD9-208ENST00000538834 TFPIP10646 304 aa12.16□□□□□ -0.46
CD9-208ENST00000538834 FPR1P21462 350 aa12.16□□□□□ -0.46
CD9-208ENST00000538834 CXCR1P25024 350 aa12.16□□□□□ -0.46
CD9-208ENST00000538834 COPZ1P61923 177 aa12.16□□□□□ -0.46
CD9-208ENST00000538834 SWT1Q5T5J6 900 aaKnown RBP12.16□□□□□ -0.46
CD9-208ENST00000538834 ULK3Q6PHR2 472 aa12.16□□□□□ -0.46
CD9-208ENST00000538834 CCDC103Q8IW40 242 aa12.16□□□□□ -0.46
CD9-208ENST00000538834 ZIC4Q8N9L1 334 aa12.16□□□□□ -0.46
CD9-208ENST00000538834 SMYD1Q8NB12 490 aa12.16□□□□□ -0.46
CD9-208ENST00000538834 OR6T1Q8NGN1 323 aa12.16□□□□□ -0.46
CD9-208ENST00000538834 OR6S1Q8NH40 331 aa12.16□□□□□ -0.46
CD9-208ENST00000538834 MFSD8Q8NHS3 518 aa12.16□□□□□ -0.46
CD9-208ENST00000538834 WFIKKN1Q96NZ8 548 aa12.16□□□□□ -0.46
CD9-208ENST00000538834 ECSITQ9BQ95 431 aa12.16□□□□□ -0.46
CD9-208ENST00000538834 ZNF426Q9BUY5 554 aa12.16□□□□□ -0.46
CD9-208ENST00000538834 EFCAB1Q9HAE3 211 aa12.16□□□□□ -0.46
CD9-208ENST00000538834 RASSF1Q9NS23 344 aa12.16□□□□□ -0.46
CD9-208ENST00000538834 AQP7P3A6NL99 342 aa12.15□□□□□ -0.46
CD9-208ENST00000538834 CCT8L1PA6NM43 557 aa12.15□□□□□ -0.46
CD9-208ENST00000538834 C16orf97H3BN30 126 aa12.15□□□□□ -0.46
CD9-208ENST00000538834 PLGP00747 810 aaPredicted RBP12.15□□□□□ -0.46
CD9-208ENST00000538834 OPN1SWP03999 348 aa12.15□□□□□ -0.46
CD9-208ENST00000538834 GPIP06744 558 aa12.15□□□□□ -0.46
CD9-208ENST00000538834 THBDP07204 575 aa12.15□□□□□ -0.46
CD9-208ENST00000538834 POU2F1P14859 743 aa12.15□□□□□ -0.46
CD9-208ENST00000538834 KDELR2P33947 212 aa12.15□□□□□ -0.46
CD9-208ENST00000538834 IDUAP35475 653 aa12.15□□□□□ -0.46
CD9-208ENST00000538834 CEACAM7Q14002 265 aa12.15□□□□□ -0.46
CD9-208ENST00000538834 POU4F3Q15319 338 aa12.15□□□□□ -0.46
CD9-208ENST00000538834 OR1Q1Q15612 314 aa12.15□□□□□ -0.46
CD9-208ENST00000538834 FXNQ16595 210 aa12.15□□□□□ -0.46
CD9-208ENST00000538834 TMEM201Q5SNT2 666 aa12.15□□□□□ -0.46
CD9-208ENST00000538834 C1orf140Q5VVS0 124 aa12.15□□□□□ -0.46
CD9-208ENST00000538834 ZNF613Q6PF04 617 aa12.15□□□□□ -0.46
CD9-208ENST00000538834 C5orf46Q6UWT4 87 aa12.15□□□□□ -0.46
CD9-208ENST00000538834 SEZ6L2Q6UXD5 910 aa12.15□□□□□ -0.46
CD9-208ENST00000538834 ARPINQ7Z6K5 226 aa12.15□□□□□ -0.46
CD9-208ENST00000538834 CPLX4Q7Z7G2 160 aa12.15□□□□□ -0.46
CD9-208ENST00000538834 MICU2Q8IYU8 434 aa12.15□□□□□ -0.46
CD9-208ENST00000538834 CADM2Q8N3J6 435 aa12.15□□□□□ -0.46
CD9-208ENST00000538834 TMEM99Q8N816 258 aa12.15□□□□□ -0.46
CD9-208ENST00000538834 OR52E4Q8NGH9 312 aa12.15□□□□□ -0.46
CD9-208ENST00000538834 PIGXQ8TBF5 258 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms