RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 DLEU7Q6UYE1 221 aa13.22□□□□□ -0.29
RAB40B-202ENST00000538809 Q71RC1 249 aaPredicted RBP13.22□□□□□ -0.29
RAB40B-202ENST00000538809 YTHDF3Q7Z739 585 aaKnown RBP13.22□□□□□ -0.29
RAB40B-202ENST00000538809 KBTBD8Q8NFY9 601 aa13.22□□□□□ -0.29
RAB40B-202ENST00000538809 IGFBPL1Q8WX77 278 aa13.22□□□□□ -0.29
RAB40B-202ENST00000538809 HSD17B8Q92506 261 aa13.22□□□□□ -0.29
RAB40B-202ENST00000538809 APH1AQ96BI3 265 aa13.22□□□□□ -0.29
RAB40B-202ENST00000538809 Q96MF0 132 aa13.22□□□□□ -0.29
RAB40B-202ENST00000538809 SPATA9Q9BWV2 254 aa13.22□□□□□ -0.29
RAB40B-202ENST00000538809 NAV3Q8IVL0 2385 aa13.21□□□□□ -0.29
RAB40B-202ENST00000538809 TMEM247A6NEH6 219 aa13.21□□□□□ -0.29
RAB40B-202ENST00000538809 FRS3O43559 492 aa13.21□□□□□ -0.29
RAB40B-202ENST00000538809 PGM3O95394 542 aa13.21□□□□□ -0.29
RAB40B-202ENST00000538809 CD3EP07766 207 aa13.21□□□□□ -0.29
RAB40B-202ENST00000538809 FOSL1P15407 271 aa13.21□□□□□ -0.29
RAB40B-202ENST00000538809 GPX2P18283 190 aa13.21□□□□□ -0.29
RAB40B-202ENST00000538809 MAP2K6P52564 334 aa13.21□□□□□ -0.29
RAB40B-202ENST00000538809 SLC16A1P53985 500 aa13.21□□□□□ -0.29
RAB40B-202ENST00000538809 SLC35A1P78382 337 aa13.21□□□□□ -0.29
RAB40B-202ENST00000538809 BSPH1Q075Z2 132 aa13.21□□□□□ -0.29
RAB40B-202ENST00000538809 BNIP2Q12982 314 aa13.21□□□□□ -0.29
RAB40B-202ENST00000538809 LARS2Q15031 903 aaKnown RBP13.21□□□□□ -0.29
RAB40B-202ENST00000538809 PPA1Q15181 289 aa13.21□□□□□ -0.29
RAB40B-202ENST00000538809 ZSWIM7Q19AV6 140 aa13.21□□□□□ -0.29
RAB40B-202ENST00000538809 ADAM5Q6NVV9 412 aa13.21□□□□□ -0.29
RAB40B-202ENST00000538809 CASP12Q6UXS9 341 aa13.21□□□□□ -0.29
RAB40B-202ENST00000538809 SERPINA11Q86U17 422 aa13.21□□□□□ -0.29
RAB40B-202ENST00000538809 ZNF433Q8N7K0 673 aaPredicted RBP13.21□□□□□ -0.29
RAB40B-202ENST00000538809 ZNF611Q8N823 705 aa13.21□□□□□ -0.29
RAB40B-202ENST00000538809 LILRB1Q8NHL6 650 aaPredicted RBP13.21□□□□□ -0.29
RAB40B-202ENST00000538809 BBS10Q8TAM1 723 aa13.21□□□□□ -0.29
RAB40B-202ENST00000538809 TMEM171Q8WVE6 324 aa13.21□□□□□ -0.29
RAB40B-202ENST00000538809 C18orf12Q96KH6 178 aa13.21□□□□□ -0.29
RAB40B-202ENST00000538809 CPPED1Q9BRF8 314 aaPredicted RBP13.21□□□□□ -0.29
RAB40B-202ENST00000538809 SIKE1Q9BRV8 207 aa13.21□□□□□ -0.29
RAB40B-202ENST00000538809 ESRP2Q9H6T0 727 aaKnown RBP13.21□□□□□ -0.29
RAB40B-202ENST00000538809 CACYBPQ9HB71 228 aaKnown RBP13.21□□□□□ -0.29
RAB40B-202ENST00000538809 NPHS2Q9NP85 383 aa13.21□□□□□ -0.29
RAB40B-202ENST00000538809 NGBQ9NPG2 151 aa13.21□□□□□ -0.29
RAB40B-202ENST00000538809 DCTN4Q9UJW0 460 aa13.21□□□□□ -0.29
RAB40B-202ENST00000538809 TRAPPC4Q9Y296 219 aa13.21□□□□□ -0.29
RAB40B-202ENST00000538809 IFT52Q9Y366 437 aa13.21□□□□□ -0.29
RAB40B-202ENST00000538809 DPRXA6NFQ7 191 aa13.2□□□□□ -0.3
RAB40B-202ENST00000538809 H7C1Q1 480 aa13.2□□□□□ -0.3
RAB40B-202ENST00000538809 GPR171O14626 319 aa13.2□□□□□ -0.3
RAB40B-202ENST00000538809 MRPL33O75394 65 aaKnown RBP13.2□□□□□ -0.3
RAB40B-202ENST00000538809 INHBBP09529 407 aa13.2□□□□□ -0.3
RAB40B-202ENST00000538809 ETS2P15036 469 aa13.2□□□□□ -0.3
RAB40B-202ENST00000538809 GGT1P19440 569 aa13.2□□□□□ -0.3
RAB40B-202ENST00000538809 NCF2P19878 526 aaPredicted RBP13.2□□□□□ -0.3
RAB40B-202ENST00000538809 PPIBP23284 216 aaKnown RBP13.2□□□□□ -0.3
RAB40B-202ENST00000538809 CXCR1P25024 350 aa13.2□□□□□ -0.3
RAB40B-202ENST00000538809 IDUAP35475 653 aa13.2□□□□□ -0.3
RAB40B-202ENST00000538809 FOXG1P55316 489 aaPredicted RBP13.2□□□□□ -0.3
RAB40B-202ENST00000538809 HOXC5Q00444 222 aa13.2□□□□□ -0.3
RAB40B-202ENST00000538809 FAPQ12884 760 aa13.2□□□□□ -0.3
RAB40B-202ENST00000538809 CEACAM7Q14002 265 aa13.2□□□□□ -0.3
RAB40B-202ENST00000538809 OR7A5Q15622 319 aa13.2□□□□□ -0.3
RAB40B-202ENST00000538809 ADRM1Q16186 407 aa13.2□□□□□ -0.3
RAB40B-202ENST00000538809 OTUD3Q5T2D3 398 aaPredicted RBP13.2□□□□□ -0.3
RAB40B-202ENST00000538809 GCNT6Q5T4J0 391 aa13.2□□□□□ -0.3
RAB40B-202ENST00000538809 C9orf135Q5VTT2 229 aa13.2□□□□□ -0.3
RAB40B-202ENST00000538809 FBXW9Q5XUX1 488 aa13.2□□□□□ -0.3
RAB40B-202ENST00000538809 RETREG3Q86VR2 466 aa13.2□□□□□ -0.3
RAB40B-202ENST00000538809 CIARTQ8N365 385 aaPredicted RBP13.2□□□□□ -0.3
RAB40B-202ENST00000538809 DPP10Q8N608 796 aa13.2□□□□□ -0.3
RAB40B-202ENST00000538809 OR52E4Q8NGH9 312 aa13.2□□□□□ -0.3
RAB40B-202ENST00000538809 SLC35B4Q969S0 331 aa13.2□□□□□ -0.3
RAB40B-202ENST00000538809 NAA11Q9BSU3 229 aaPredicted RBP13.2□□□□□ -0.3
RAB40B-202ENST00000538809 GSX2Q9BZM3 304 aa13.2□□□□□ -0.3
RAB40B-202ENST00000538809 RABEP2Q9H5N1 569 aa13.2□□□□□ -0.3
RAB40B-202ENST00000538809 TMEM38AQ9H6F2 299 aa13.2□□□□□ -0.3
RAB40B-202ENST00000538809 NPAP1Q9NZP6 1156 aa13.2□□□□□ -0.3
RAB40B-202ENST00000538809 FLVCR1Q9Y5Y0 555 aa13.2□□□□□ -0.3
RAB40B-202ENST00000538809 A0A1W2PR80 420 aa13.19□□□□□ -0.3
RAB40B-202ENST00000538809 CIB4A0PJX0 185 aa13.19□□□□□ -0.3
RAB40B-202ENST00000538809 TRIM64A6NGJ6 449 aa13.19□□□□□ -0.3
RAB40B-202ENST00000538809 TRIM64BA6NI03 449 aa13.19□□□□□ -0.3
RAB40B-202ENST00000538809 CCT8L1PA6NM43 557 aa13.19□□□□□ -0.3
RAB40B-202ENST00000538809 AKR7A3O95154 331 aa13.19□□□□□ -0.3
RAB40B-202ENST00000538809 COPZ1P61923 177 aa13.19□□□□□ -0.3
RAB40B-202ENST00000538809 RUNDC3AQ59EK9 446 aa13.19□□□□□ -0.3
RAB40B-202ENST00000538809 ZNF311Q5JNZ3 666 aa13.19□□□□□ -0.3
RAB40B-202ENST00000538809 WBP2NLQ6ICG8 309 aa13.19□□□□□ -0.3
RAB40B-202ENST00000538809 CGB2Q6NT52 195 aa13.19□□□□□ -0.3
RAB40B-202ENST00000538809 BIVMQ86UB2 503 aa13.19□□□□□ -0.3
RAB40B-202ENST00000538809 COMTD1Q86VU5 262 aa13.19□□□□□ -0.3
RAB40B-202ENST00000538809 TMEM99Q8N816 258 aa13.19□□□□□ -0.3
RAB40B-202ENST00000538809 OR52N5Q8NH56 324 aa13.19□□□□□ -0.3
RAB40B-202ENST00000538809 NFKBIDQ8NI38 313 aa13.19□□□□□ -0.3
RAB40B-202ENST00000538809 TSPEARQ8WU66 669 aa13.19□□□□□ -0.3
RAB40B-202ENST00000538809 FBXW5Q969U6 566 aa13.19□□□□□ -0.3
RAB40B-202ENST00000538809 C3orf49Q96BT1 292 aa13.19□□□□□ -0.3
RAB40B-202ENST00000538809 POM121Q96HA1 1249 aa13.19□□□□□ -0.3
RAB40B-202ENST00000538809 CXorf56Q9H5V9 222 aa13.19□□□□□ -0.3
RAB40B-202ENST00000538809 LEF1Q9UJU2 399 aaPredicted RBP13.19□□□□□ -0.3
RAB40B-202ENST00000538809 ZNF232Q9UNY5 417 aa13.19□□□□□ -0.3
RAB40B-202ENST00000538809 LAMP3Q9UQV4 416 aa13.19□□□□□ -0.3
RAB40B-202ENST00000538809 NSD1Q96L73 2696 aaPredicted RBP13.19□□□□□ -0.3
RAB40B-202ENST00000538809 TLN2Q9Y4G6 2542 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms