RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 POMT1Q9Y6A1 747 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 GRXCR2A6NFK2 248 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 AK1P00568 194 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 KCNE1P15382 129 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 CD52P31358 61 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 SRP9P49458 86 aaKnown RBP5.31□□□□□ -1.56
CSMD1-215ENST00000537824 RPS18P62269 152 aaKnown RBP5.31□□□□□ -1.56
CSMD1-215ENST00000537824 DGCR2P98153 550 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 RIN1Q13671 783 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 ZNF74Q16587 644 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 AMZ1Q400G9 498 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 SBSNQ6UWP8 590 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 ZNF300Q96RE9 604 aaPredicted RBP5.31□□□□□ -1.56
CSMD1-215ENST00000537824 RSRP1Q9BUV0 290 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 VAMP8Q9BV40 100 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 TDP1Q9NUW8 608 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 ARL2-SNX15V9GYD0 113 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 PNMTP11086 282 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 CD1EP15812 388 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 ADCYAP1R1P41586 468 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 FAM180BQ6P0A1 224 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 MRGPRX2Q96LB1 330 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 SEMA4GQ9NTN9 838 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 RNF181Q9P0P0 153 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 SLAMF8Q9P0V8 285 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 EMC8O43402 210 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 OR4Q2P0C623 313 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 HOXB9P17482 250 aaPredicted RBP5.31□□□□□ -1.56
CSMD1-215ENST00000537824 RAB5AP20339 215 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 RAB28P51157 221 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 DAPP51397 102 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 GP2P55259 537 aaKnown RBP5.31□□□□□ -1.56
CSMD1-215ENST00000537824 SLC10A6Q3KNW5 377 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 ZNF417Q8TAU3 575 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 OR5M11Q96RB7 305 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 SYT17Q9BSW7 474 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 SPATA6Q9NWH7 488 aaPredicted RBP5.31□□□□□ -1.56
CSMD1-215ENST00000537824 RHBDD3Q9Y3P4 386 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 PCDHA9Q9Y5H5 950 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 PTBP1P26599 531 aaKnown RBP eCLIP5.31□□□□□ -1.562e-7■■■□□ 17
CSMD1-215ENST00000537824 ELLP55199 621 aaPredicted RBP5.31□□□□□ -1.56
CSMD1-215ENST00000537824 TAS2R46P59540 309 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 ADARB1P78563 741 aaKnown RBP5.31□□□□□ -1.56
CSMD1-215ENST00000537824 TESK1Q15569 626 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 CPZQ66K79 652 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 OR9A1PQ8NGU1 263 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 LRRC15Q8TF66 581 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 MTIF3Q9H2K0 278 aaKnown RBP5.31□□□□□ -1.56
CSMD1-215ENST00000537824 ZNF385DQ9H6B1 395 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 WIF1Q9Y5W5 379 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 ANKRD61A6NGH8 418 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 FPR3P25089 353 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 SLC1A3P43003 542 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 GPR50Q13585 617 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 NDUFAF7Q7L592 441 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 OR2T4Q8NH00 348 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 SENP5Q96HI0 755 aaPredicted RBP5.31□□□□□ -1.56
CSMD1-215ENST00000537824 SLC25A32Q9H2D1 315 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 CDCP1Q9H5V8 836 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 PLEKHJ1Q9NW61 149 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 ALPK3Q96L96 1907 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 TRABD2BA6NFA1 517 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 KIAA0355O15063 1070 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 MAP2K5Q13163 448 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 SFXN4Q6P4A7 337 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 LYPD8Q6UX82 237 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 RNF111Q6ZNA4 994 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 BTLAQ7Z6A9 289 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 HUS1BQ8NHY5 278 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 SLC2A12Q8TD20 617 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 TBC1D20Q96BZ9 403 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 MEGF10Q96KG7 1140 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 FAM103A1Q9BTL3 118 aaKnown RBP5.31□□□□□ -1.56
CSMD1-215ENST00000537824 SUV39H2Q9H5I1 410 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 NRIP3Q9NQ35 241 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 A0A087WV62 115 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 ZFP92A6NM28 416 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 CCL23P55773 120 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 DSC1Q08554 894 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 PGGHGQ32M88 737 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 TMEM31Q5JXX7 168 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 HEPHL1Q6MZM0 1159 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 RHOUQ7L0Q8 258 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 EGLN3Q9H6Z9 239 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 USP36Q9P275 1121 aaKnown RBP5.31□□□□□ -1.56
CSMD1-215ENST00000537824 TAF1LQ8IZX4 1826 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 XKRY2A2RUG3 117 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 ANKRD66B4E2M5 251 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 PMS2P2O95744 297 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 ARSAP15289 507 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 CLDN12P56749 244 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 PLK5Q496M5 336 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 MEPCEQ7L2J0 689 aaKnown RBP5.3□□□□□ -1.56
CSMD1-215ENST00000537824 PLA2G15Q8NCC3 412 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 DAZAP1Q96EP5 407 aaKnown RBP5.3□□□□□ -1.56
CSMD1-215ENST00000537824 ABHD16BQ9H3Z7 469 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 EXOSC3Q9NQT5 275 aaKnown RBP5.3□□□□□ -1.56
CSMD1-215ENST00000537824 KCNIP1Q9NZI2 227 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 ABRACLQ9P1F3 81 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 CAMK2AQ9UQM7 478 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms