RNA–Protein interactions for RNA: ENST00000536661.1

UBC-204, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-204ENST00000536661 IKZF5Q9H5V7 419 aa13.2□□□□□ -0.3
UBC-204ENST00000536661 CACYBPQ9HB71 228 aaKnown RBP13.2□□□□□ -0.3
UBC-204ENST00000536661 ZNF232Q9UNY5 417 aa13.2□□□□□ -0.3
UBC-204ENST00000536661 IFT52Q9Y366 437 aa13.2□□□□□ -0.3
UBC-204ENST00000536661 RNF115Q9Y4L5 304 aa13.2□□□□□ -0.3
UBC-204ENST00000536661 ARHGEF9O43307 516 aa13.19□□□□□ -0.3
UBC-204ENST00000536661 FRS3O43559 492 aa13.19□□□□□ -0.3
UBC-204ENST00000536661 EIF1BO60739 113 aaKnown RBP13.19□□□□□ -0.3
UBC-204ENST00000536661 PGM3O95394 542 aa13.19□□□□□ -0.3
UBC-204ENST00000536661 FOSL1P15407 271 aa13.19□□□□□ -0.3
UBC-204ENST00000536661 NCF2P19878 526 aaPredicted RBP13.19□□□□□ -0.3
UBC-204ENST00000536661 COPZ1P61923 177 aa13.19□□□□□ -0.3
UBC-204ENST00000536661 CEACAM7Q14002 265 aa13.19□□□□□ -0.3
UBC-204ENST00000536661 PPA1Q15181 289 aa13.19□□□□□ -0.3
UBC-204ENST00000536661 OR7A5Q15622 319 aa13.19□□□□□ -0.3
UBC-204ENST00000536661 ZNF311Q5JNZ3 666 aa13.19□□□□□ -0.3
UBC-204ENST00000536661 GCNT6Q5T4J0 391 aa13.19□□□□□ -0.3
UBC-204ENST00000536661 PAQR6Q6TCH4 344 aa13.19□□□□□ -0.3
UBC-204ENST00000536661 CASP12Q6UXS9 341 aa13.19□□□□□ -0.3
UBC-204ENST00000536661 UBE2J2Q8N2K1 259 aa13.19□□□□□ -0.3
UBC-204ENST00000536661 ZNF611Q8N823 705 aa13.19□□□□□ -0.3
UBC-204ENST00000536661 KBTBD8Q8NFY9 601 aa13.19□□□□□ -0.3
UBC-204ENST00000536661 LILRB1Q8NHL6 650 aaPredicted RBP13.19□□□□□ -0.3
UBC-204ENST00000536661 NFKBIDQ8NI38 313 aa13.19□□□□□ -0.3
UBC-204ENST00000536661 NAA11Q9BSU3 229 aaPredicted RBP13.19□□□□□ -0.3
UBC-204ENST00000536661 RSPO3Q9BXY4 272 aaPredicted RBP13.19□□□□□ -0.3
UBC-204ENST00000536661 ESRP2Q9H6T0 727 aaKnown RBP13.19□□□□□ -0.3
UBC-204ENST00000536661 NGBQ9NPG2 151 aa13.19□□□□□ -0.3
UBC-204ENST00000536661 TMEM45AQ9NWC5 275 aa13.19□□□□□ -0.3
UBC-204ENST00000536661 SLC9A8Q9Y2E8 581 aa13.19□□□□□ -0.3
UBC-204ENST00000536661 FLVCR1Q9Y5Y0 555 aa13.19□□□□□ -0.3
UBC-204ENST00000536661 GMEB1Q9Y692 573 aa13.19□□□□□ -0.3
UBC-204ENST00000536661 CADP27708 2225 aa13.19□□□□□ -0.3
UBC-204ENST00000536661 DPRXA6NFQ7 191 aa13.18□□□□□ -0.3
UBC-204ENST00000536661 LIPT2A6NK58 231 aa13.18□□□□□ -0.3
UBC-204ENST00000536661 TMEM229AB2RXF0 380 aa13.18□□□□□ -0.3
UBC-204ENST00000536661 C5orf58C9J3I9 102 aa13.18□□□□□ -0.3
UBC-204ENST00000536661 CLOCKO15516 846 aa13.18□□□□□ -0.3
UBC-204ENST00000536661 MRPL33O75394 65 aaKnown RBP13.18□□□□□ -0.3
UBC-204ENST00000536661 RAD51DO75771 328 aa13.18□□□□□ -0.3
UBC-204ENST00000536661 SASH3O75995 380 aa13.18□□□□□ -0.3
UBC-204ENST00000536661 AKR7A3O95154 331 aa13.18□□□□□ -0.3
UBC-204ENST00000536661 GPIP06744 558 aa13.18□□□□□ -0.3
UBC-204ENST00000536661 CD3EP07766 207 aa13.18□□□□□ -0.3
UBC-204ENST00000536661 ETS2P15036 469 aa13.18□□□□□ -0.3
UBC-204ENST00000536661 HOXB4P17483 251 aaPredicted RBP13.18□□□□□ -0.3
UBC-204ENST00000536661 GGT1P19440 569 aa13.18□□□□□ -0.3
UBC-204ENST00000536661 PPIBP23284 216 aaKnown RBP13.18□□□□□ -0.3
UBC-204ENST00000536661 PTH2RP49190 550 aa13.18□□□□□ -0.3
UBC-204ENST00000536661 FOXG1P55316 489 aaPredicted RBP13.18□□□□□ -0.3
UBC-204ENST00000536661 IRX1P78414 480 aaPredicted RBP13.18□□□□□ -0.3
UBC-204ENST00000536661 HOXC5Q00444 222 aa13.18□□□□□ -0.3
UBC-204ENST00000536661 BSPH1Q075Z2 132 aa13.18□□□□□ -0.3
UBC-204ENST00000536661 SLC17A1Q14916 467 aa13.18□□□□□ -0.3
UBC-204ENST00000536661 TIMM23BQ5SRD1 257 aa13.18□□□□□ -0.3
UBC-204ENST00000536661 OTUD3Q5T2D3 398 aaPredicted RBP13.18□□□□□ -0.3
UBC-204ENST00000536661 ADAM5Q6NVV9 412 aa13.18□□□□□ -0.3
UBC-204ENST00000536661 COMTD1Q86VU5 262 aa13.18□□□□□ -0.3
UBC-204ENST00000536661 TMEM99Q8N816 258 aa13.18□□□□□ -0.3
UBC-204ENST00000536661 TMEM171Q8WVE6 324 aa13.18□□□□□ -0.3
UBC-204ENST00000536661 STON2Q8WXE9 905 aa13.18□□□□□ -0.3
UBC-204ENST00000536661 NEUROG1Q92886 237 aa13.18□□□□□ -0.3
UBC-204ENST00000536661 C3orf49Q96BT1 292 aa13.18□□□□□ -0.3
UBC-204ENST00000536661 CPPED1Q9BRF8 314 aaPredicted RBP13.18□□□□□ -0.3
UBC-204ENST00000536661 ZNF385DQ9H6B1 395 aa13.18□□□□□ -0.3
UBC-204ENST00000536661 ARMC7Q9H6L4 198 aa13.18□□□□□ -0.3
UBC-204ENST00000536661 NPAP1Q9NZP6 1156 aa13.18□□□□□ -0.3
UBC-204ENST00000536661 MALT1Q9UDY8 824 aa13.18□□□□□ -0.3
UBC-204ENST00000536661 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.18□□□□□ -0.3
UBC-204ENST00000536661 A0A1W2PP18 115 aa13.17□□□□□ -0.3
UBC-204ENST00000536661 OR5H1A6NKK0 313 aa13.17□□□□□ -0.3
UBC-204ENST00000536661 A8MVM7 634 aa13.17□□□□□ -0.3
UBC-204ENST00000536661 EDF1O60869 148 aaKnown RBP13.17□□□□□ -0.3
UBC-204ENST00000536661 ITGA5P08648 1049 aa13.17□□□□□ -0.3
UBC-204ENST00000536661 CDK6Q00534 326 aa13.17□□□□□ -0.3
UBC-204ENST00000536661 FAPQ12884 760 aa13.17□□□□□ -0.3
UBC-204ENST00000536661 DLEU7Q6UYE1 221 aa13.17□□□□□ -0.3
UBC-204ENST00000536661 YTHDF3Q7Z739 585 aaKnown RBP13.17□□□□□ -0.3
UBC-204ENST00000536661 OR52E4Q8NGH9 312 aa13.17□□□□□ -0.3
UBC-204ENST00000536661 SLC35B4Q969S0 331 aa13.17□□□□□ -0.3
UBC-204ENST00000536661 C18orf12Q96KH6 178 aa13.17□□□□□ -0.3
UBC-204ENST00000536661 Q96MF0 132 aa13.17□□□□□ -0.3
UBC-204ENST00000536661 SMR3AQ99954 134 aa13.17□□□□□ -0.3
UBC-204ENST00000536661 GSX2Q9BZM3 304 aa13.17□□□□□ -0.3
UBC-204ENST00000536661 NPHS2Q9NP85 383 aa13.17□□□□□ -0.3
UBC-204ENST00000536661 ASB6Q9NWX5 421 aa13.17□□□□□ -0.3
UBC-204ENST00000536661 ADPRHL2Q9NX46 363 aa13.17□□□□□ -0.3
UBC-204ENST00000536661 TAS2R16Q9NYV7 291 aa13.17□□□□□ -0.3
UBC-204ENST00000536661 DCTN4Q9UJW0 460 aa13.17□□□□□ -0.3
UBC-204ENST00000536661 PRDM4Q9UKN5 801 aa13.17□□□□□ -0.3
UBC-204ENST00000536661 USF3Q68DE3 2245 aa13.16□□□□□ -0.3
UBC-204ENST00000536661 CIB4A0PJX0 185 aa13.16□□□□□ -0.3
UBC-204ENST00000536661 AQP7P3A6NL99 342 aa13.16□□□□□ -0.3
UBC-204ENST00000536661 PDLIM1O00151 329 aa13.16□□□□□ -0.3
UBC-204ENST00000536661 NPIPB7O75200 414 aa13.16□□□□□ -0.3
UBC-204ENST00000536661 GPX2P18283 190 aa13.16□□□□□ -0.3
UBC-204ENST00000536661 PRKAR1BP31321 381 aa13.16□□□□□ -0.3
UBC-204ENST00000536661 P2RY4P51582 365 aa13.16□□□□□ -0.3
UBC-204ENST00000536661 KRTAP21-3Q3LHN1 58 aa13.16□□□□□ -0.3
UBC-204ENST00000536661 TSPO2Q5TGU0 170 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms