RNA–Protein interactions for RNA: ENST00000535934.2

POLE-208, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 5

Gene POLE, Length 1,561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-208	ENST00000535934	IGKV1D-16	P01601	117 aa		12.76	□□□□□ -0.37
POLE-208	ENST00000535934	EFNA1	P20827	205 aa	Predicted RBP	12.76	□□□□□ -0.37
POLE-208	ENST00000535934	NTS	P30990	170 aa		12.76	□□□□□ -0.37
POLE-208	ENST00000535934	SRD5A2	P31213	254 aa		12.76	□□□□□ -0.37
POLE-208	ENST00000535934	MAP3K8	P41279	467 aa		12.76	□□□□□ -0.37
POLE-208	ENST00000535934	LHX2	P50458	406 aa		12.76	□□□□□ -0.37
POLE-208	ENST00000535934	B3GALT5-AS1	P59052	145 aa		12.76	□□□□□ -0.37
POLE-208	ENST00000535934	FOXF2	Q12947	444 aa		12.76	□□□□□ -0.37
POLE-208	ENST00000535934	HSPB3	Q12988	150 aa		12.76	□□□□□ -0.37
POLE-208	ENST00000535934	MAPK11	Q15759	364 aa		12.76	□□□□□ -0.37
POLE-208	ENST00000535934	CYP27C1	Q4G0S4	372 aa		12.76	□□□□□ -0.37
POLE-208	ENST00000535934	CCDC58	Q4VC31	144 aa		12.76	□□□□□ -0.37
POLE-208	ENST00000535934	ZNF691	Q5VV52	312 aa		12.76	□□□□□ -0.37
POLE-208	ENST00000535934	ARSK	Q6UWY0	536 aa		12.76	□□□□□ -0.37
POLE-208	ENST00000535934	APOOL	Q6UXV4	268 aa		12.76	□□□□□ -0.37
POLE-208	ENST00000535934	RNF165	Q6ZSG1	346 aa		12.76	□□□□□ -0.37
POLE-208	ENST00000535934	STK32C	Q86UX6	486 aa		12.76	□□□□□ -0.37
POLE-208	ENST00000535934	RETREG3	Q86VR2	466 aa		12.76	□□□□□ -0.37
POLE-208	ENST00000535934	CLIP4	Q8N3C7	705 aa		12.76	□□□□□ -0.37
POLE-208	ENST00000535934	OR6F1	Q8NGZ6	308 aa		12.76	□□□□□ -0.37
POLE-208	ENST00000535934	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	12.76	□□□□□ -0.37
POLE-208	ENST00000535934	ZPLD1	Q8TCW7	415 aa		12.76	□□□□□ -0.37
POLE-208	ENST00000535934	HTRA1	Q92743	480 aa		12.76	□□□□□ -0.37
POLE-208	ENST00000535934	LGALS12	Q96DT0	336 aa		12.76	□□□□□ -0.37
POLE-208	ENST00000535934	C3orf30	Q96M34	536 aa		12.76	□□□□□ -0.37
POLE-208	ENST00000535934	TRAF4	Q9BUZ4	470 aa	Predicted RBP	12.76	□□□□□ -0.37
POLE-208	ENST00000535934	CALHM2	Q9HA72	323 aa		12.76	□□□□□ -0.37
POLE-208	ENST00000535934	KCNN3	Q9UGI6	736 aa		12.76	□□□□□ -0.37
POLE-208	ENST00000535934	CBLC	Q9ULV8	474 aa		12.76	□□□□□ -0.37
POLE-208	ENST00000535934	PIP5K1B	O14986	540 aa		12.75	□□□□□ -0.37
POLE-208	ENST00000535934	ARHGEF9	O43307	516 aa		12.75	□□□□□ -0.37
POLE-208	ENST00000535934	ICMT	O60725	284 aa		12.75	□□□□□ -0.37
POLE-208	ENST00000535934	MTRF1	O75570	445 aa	Known RBP	12.75	□□□□□ -0.37
POLE-208	ENST00000535934	MFN2	O95140	757 aa		12.75	□□□□□ -0.37
POLE-208	ENST00000535934	IL2RA	P01589	272 aa		12.75	□□□□□ -0.37
POLE-208	ENST00000535934	HTR1A	P08908	422 aa		12.75	□□□□□ -0.37
POLE-208	ENST00000535934	BCKDHA	P12694	445 aa		12.75	□□□□□ -0.37
POLE-208	ENST00000535934	CAPN3	P20807	821 aa		12.75	□□□□□ -0.37
POLE-208	ENST00000535934	EVI2B	P34910	448 aa		12.75	□□□□□ -0.37
POLE-208	ENST00000535934	KRT20	P35900	424 aa		12.75	□□□□□ -0.37
POLE-208	ENST00000535934	RPS5	P46782	204 aa	Known RBP	12.75	□□□□□ -0.37
POLE-208	ENST00000535934	RPL38	P63173	70 aa	Known RBP	12.75	□□□□□ -0.37
POLE-208	ENST00000535934	EMX1	Q04741	257 aa	Predicted RBP	12.75	□□□□□ -0.37
POLE-208	ENST00000535934	PDE7A	Q13946	482 aa		12.75	□□□□□ -0.37
POLE-208	ENST00000535934	TESK1	Q15569	626 aa		12.75	□□□□□ -0.37
POLE-208	ENST00000535934	OTUD3	Q5T2D3	398 aa	Predicted RBP	12.75	□□□□□ -0.37
POLE-208	ENST00000535934	STEAP3	Q658P3	488 aa		12.75	□□□□□ -0.37
POLE-208	ENST00000535934	CCBE1	Q6UXH8	406 aa	Predicted RBP	12.75	□□□□□ -0.37
POLE-208	ENST00000535934	GALNT10	Q86SR1	603 aa		12.75	□□□□□ -0.37
POLE-208	ENST00000535934	SLC51B	Q86UW2	128 aa		12.75	□□□□□ -0.37
POLE-208	ENST00000535934	ZBTB46	Q86UZ6	589 aa		12.75	□□□□□ -0.37
POLE-208	ENST00000535934	HIPK1	Q86Z02	1210 aa		12.75	□□□□□ -0.37
POLE-208	ENST00000535934	IL17RD	Q8NFM7	739 aa		12.75	□□□□□ -0.37
POLE-208	ENST00000535934	TWIST2	Q8WVJ9	160 aa		12.75	□□□□□ -0.37
POLE-208	ENST00000535934	RNF145	Q96MT1	663 aa		12.75	□□□□□ -0.37
POLE-208	ENST00000535934	CCDC115	Q96NT0	180 aa		12.75	□□□□□ -0.37
POLE-208	ENST00000535934	ZNF559	Q9BR84	538 aa		12.75	□□□□□ -0.37
POLE-208	ENST00000535934	LMF2	Q9BU23	707 aa	Known RBP	12.75	□□□□□ -0.37
POLE-208	ENST00000535934	NXF2	Q9GZY0	626 aa	Known RBP	12.75	□□□□□ -0.37
POLE-208	ENST00000535934	DUSP21	Q9H596	190 aa		12.75	□□□□□ -0.37
POLE-208	ENST00000535934	REEP4	Q9H6H4	257 aa		12.75	□□□□□ -0.37
POLE-208	ENST00000535934	EQTN	Q9NQ60	294 aa		12.75	□□□□□ -0.37
POLE-208	ENST00000535934	CRIM1	Q9NZV1	1036 aa		12.75	□□□□□ -0.37
POLE-208	ENST00000535934	MED11	Q9P086	117 aa		12.75	□□□□□ -0.37
POLE-208	ENST00000535934	ZNF629	Q9UEG4	869 aa	Predicted RBP	12.75	□□□□□ -0.37
POLE-208	ENST00000535934	RPH3A	Q9Y2J0	694 aa	Predicted RBP	12.75	□□□□□ -0.37
POLE-208	ENST00000535934	TMA7	Q9Y2S6	64 aa	Known RBP	12.75	□□□□□ -0.37
POLE-208	ENST00000535934	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		12.74	□□□□□ -0.37
POLE-208	ENST00000535934	LOC100130705	A0A1B0GUX0	176 aa		12.74	□□□□□ -0.37
POLE-208	ENST00000535934	DVL2	O14641	736 aa		12.74	□□□□□ -0.37
POLE-208	ENST00000535934	PDPK1	O15530	556 aa		12.74	□□□□□ -0.37
POLE-208	ENST00000535934	TBX19	O60806	448 aa		12.74	□□□□□ -0.37
POLE-208	ENST00000535934	SLITRK5	O94991	958 aa		12.74	□□□□□ -0.37
POLE-208	ENST00000535934	INMT	O95050	263 aa		12.74	□□□□□ -0.37
POLE-208	ENST00000535934	KCNK2	O95069	426 aa		12.74	□□□□□ -0.37
POLE-208	ENST00000535934	IL33	O95760	270 aa		12.74	□□□□□ -0.37
POLE-208	ENST00000535934	UBL4A	P11441	157 aa		12.74	□□□□□ -0.37
POLE-208	ENST00000535934	PRKACB	P22694	351 aa		12.74	□□□□□ -0.37
POLE-208	ENST00000535934	DPP4	P27487	766 aa		12.74	□□□□□ -0.37
POLE-208	ENST00000535934	UQCRC1	P31930	480 aa		12.74	□□□□□ -0.37
POLE-208	ENST00000535934	GABRA3	P34903	492 aa		12.74	□□□□□ -0.37
POLE-208	ENST00000535934	FRK	P42685	505 aa	Predicted RBP	12.74	□□□□□ -0.37
POLE-208	ENST00000535934	CLDN15	P56746	228 aa		12.74	□□□□□ -0.37
POLE-208	ENST00000535934	CLDN18	P56856	261 aa		12.74	□□□□□ -0.37
POLE-208	ENST00000535934	OR2B6	P58173	313 aa		12.74	□□□□□ -0.37
POLE-208	ENST00000535934	ISL1	P61371	349 aa		12.74	□□□□□ -0.37
POLE-208	ENST00000535934	EMX2	Q04743	252 aa		12.74	□□□□□ -0.37
POLE-208	ENST00000535934	CD47	Q08722	323 aa		12.74	□□□□□ -0.37
POLE-208	ENST00000535934	MYBPH	Q13203	477 aa		12.74	□□□□□ -0.37
POLE-208	ENST00000535934	RFPL4B	Q6ZWI9	263 aa		12.74	□□□□□ -0.37
POLE-208	ENST00000535934	MARCH3	Q86UD3	253 aa		12.74	□□□□□ -0.37
POLE-208	ENST00000535934	CDH24	Q86UP0	819 aa		12.74	□□□□□ -0.37
POLE-208	ENST00000535934	IFNE	Q86WN2	208 aa		12.74	□□□□□ -0.37
POLE-208	ENST00000535934	ZZZ3	Q8IYH5	903 aa		12.74	□□□□□ -0.37
POLE-208	ENST00000535934	UBQLNL	Q8IYU4	475 aa		12.74	□□□□□ -0.37
POLE-208	ENST00000535934	FADS6	Q8N9I5	356 aa		12.74	□□□□□ -0.37
POLE-208	ENST00000535934	OR5K1	Q8NHB7	308 aa		12.74	□□□□□ -0.37
POLE-208	ENST00000535934	NDNF	Q8TB73	568 aa		12.74	□□□□□ -0.37
POLE-208	ENST00000535934	HOXB13	Q92826	284 aa	Predicted RBP	12.74	□□□□□ -0.37
POLE-208	ENST00000535934	GIMAP5	Q96F15	307 aa		12.74	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms