RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 ACTG2P63267 376 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 GALK2Q01415 458 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 GAS6Q14393 721 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 GPR176Q14439 515 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 RAB30Q15771 203 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 GXYLT1Q4G148 440 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 GPR135Q8IZ08 494 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 GRPEL2Q8TAA5 225 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 THAP4Q8WY91 577 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 GPR174Q9BXC1 333 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 CLEC4AQ9UMR7 237 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 LAMA1P25391 3075 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 NPIPB9F8W1W9 429 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 CLDN4O14493 209 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 EEF1E1O43324 174 aaKnown RBP12.07□□□□□ -0.48
LDLR-203ENST00000535915 FOXS1O43638 330 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 FZD7O75084 574 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 TRIM3O75382 744 aaPredicted RBP12.07□□□□□ -0.48
LDLR-203ENST00000535915 SERPINA3P01011 423 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 OR2T7P0C7T2 308 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 CT45A8P0DMV1 189 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 CT45A9P0DMV2 189 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 TFPIP10646 304 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 MAOAP21397 527 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 GDI2P50395 445 aaKnown RBP12.07□□□□□ -0.48
LDLR-203ENST00000535915 GBX2P52951 348 aaPredicted RBP12.07□□□□□ -0.48
LDLR-203ENST00000535915 PRTGQ2VWP7 1150 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 CT45A2Q5DJT8 189 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 ZNF595Q8IYB9 648 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 TCTE3Q8IZS6 198 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 POMGNT2Q8NAT1 580 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 OR2T27Q8NH04 317 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 OR4C3Q8NH37 302 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 ANGPTL6Q8NI99 470 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 SNX33Q8WV41 574 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 PELI1Q96FA3 418 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 ABCG5Q9H222 651 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 AGFG1P52594 562 aaKnown RBP12.07□□□□□ -0.48
LDLR-203ENST00000535915 PSMD4P55036 377 aaKnown RBP12.07□□□□□ -0.48
LDLR-203ENST00000535915 MAZP56270 477 aaKnown RBP12.07□□□□□ -0.48
LDLR-203ENST00000535915 LGALS3BPQ08380 585 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 PON3Q15166 354 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 ZSWIM7Q19AV6 140 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 KRT74Q7RTS7 529 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 SYT9Q86SS6 491 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 PARGQ86W56 976 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 CCDC28AQ8IWP9 274 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 SLC35F2Q8IXU6 374 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 METTL27Q8N6F8 245 aaPredicted RBP12.07□□□□□ -0.48
LDLR-203ENST00000535915 BCORP1Q8N888 145 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 C16orf52Q8NHV5 167 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 CREB3L1Q96BA8 519 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 SMIM19Q96E16 107 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 LRFN5Q96NI6 719 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 NMNAT3Q96T66 252 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 OR10A5Q9H207 317 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 RPRD1BQ9NQG5 326 aaKnown RBP12.07□□□□□ -0.48
LDLR-203ENST00000535915 GNG8Q9UK08 70 aa12.07□□□□□ -0.48
LDLR-203ENST00000535915 A0A087WUJ7 227 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 SERINC4A6NH21 518 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 SRPX2O60687 465 aaPredicted RBP12.06□□□□□ -0.48
LDLR-203ENST00000535915 IFNA16P05015 189 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 GPR3P46089 330 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 CCR5P51681 352 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 RRAS2P62070 204 aaPredicted RBP12.06□□□□□ -0.48
LDLR-203ENST00000535915 CDK5R1Q15078 307 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 TEX19Q8NA77 164 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 ABHD1Q96SE0 405 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 MAP3K3Q99759 626 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 DHRS9Q9BPW9 319 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 CCDC86Q9H6F5 360 aaKnown RBP12.06□□□□□ -0.48
LDLR-203ENST00000535915 MCUBQ9NWR8 336 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 ING3Q9NXR8 418 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 SLCO1B1Q9Y6L6 691 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 PCDH15Q96QU1 1955 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 TRBV2A0A0J9YWF9 115 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 EFCAB7A8K855 629 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 OGG1O15527 345 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 PPM1BO75688 479 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 SERPINI2O75830 405 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 AHCYP23526 432 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 SLC6A1P30531 599 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 BLKP51451 505 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 SIRPAP78324 504 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 CCINQ13939 588 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 TIGD3Q6B0B8 471 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 PYHIN1Q6K0P9 492 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 CMIPQ8IY22 773 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 SYS1Q8N2H4 156 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 OR5H6Q8NGV6 325 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 OR6K6Q8NGW6 343 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 ZNRF4Q8WWF5 429 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 MMABQ96EY8 250 aaPredicted RBP12.06□□□□□ -0.48
LDLR-203ENST00000535915 KLHDC7BQ96G42 594 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 LRRC61Q9BV99 259 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 GALNT9Q9HCQ5 603 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 FBXO9Q9UK97 447 aaPredicted RBP12.06□□□□□ -0.48
LDLR-203ENST00000535915 NPFFR2Q9Y5X5 522 aa12.06□□□□□ -0.48
LDLR-203ENST00000535915 IMPA2O14732 288 aa12.05□□□□□ -0.48
LDLR-203ENST00000535915 PRKNO60260 465 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms