RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 BSPH1Q075Z2 132 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 FAPQ12884 760 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 FADDQ13158 208 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 SQLEQ14534 574 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 PDK3Q15120 406 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 PAGE3Q5JUK9 113 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 NCMAPQ5T1S8 102 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 RNF220Q5VTB9 566 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 FBXW9Q5XUX1 488 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 ADAM5Q6NVV9 412 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 BLOC1S3Q6QNY0 202 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 SERPINA11Q86U17 422 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 GPAT4Q86UL3 456 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 FUNDC1Q8IVP5 155 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 LRRC75A-AS1Q8N1F1 130 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 ZNF433Q8N7K0 673 aaPredicted RBP9.22□□□□□ -0.93
CAPN1-225ENST00000533704 TMEM99Q8N816 258 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 KBTBD8Q8NFY9 601 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 OR52N5Q8NH56 324 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 BBS10Q8TAM1 723 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 C18orf12Q96KH6 178 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 SMR3AQ99954 134 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 TAPBPLQ9BX59 468 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 ADAM19Q9H013 955 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 CXorf56Q9H5V9 222 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 A4GALTQ9NPC4 353 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 DLL4Q9NR61 685 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 ASB6Q9NWX5 421 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 SLC25A37Q9NYZ2 338 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 SLAMF8Q9P0V8 285 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 UPB1Q9UBR1 384 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 RPS6KB2Q9UBS0 482 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 DCTN4Q9UJW0 460 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 LAMP3Q9UQV4 416 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 IFT52Q9Y366 437 aa9.22□□□□□ -0.93
CAPN1-225ENST00000533704 DPRXA6NFQ7 191 aa9.21□□□□□ -0.94
CAPN1-225ENST00000533704 H7C1Q1 480 aa9.21□□□□□ -0.94
CAPN1-225ENST00000533704 PGM3O95394 542 aa9.21□□□□□ -0.94
CAPN1-225ENST00000533704 GPIP06744 558 aa9.21□□□□□ -0.94
CAPN1-225ENST00000533704 INHBBP09529 407 aa9.21□□□□□ -0.94
CAPN1-225ENST00000533704 FOSL1P15407 271 aa9.21□□□□□ -0.94
CAPN1-225ENST00000533704 COX5AP20674 150 aa9.21□□□□□ -0.94
CAPN1-225ENST00000533704 AQP1P29972 269 aa9.21□□□□□ -0.94
CAPN1-225ENST00000533704 NTF4P34130 210 aa9.21□□□□□ -0.94
CAPN1-225ENST00000533704 ZNF83P51522 516 aa9.21□□□□□ -0.94
CAPN1-225ENST00000533704 SLC16A1P53985 500 aa9.21□□□□□ -0.94
CAPN1-225ENST00000533704 FOXG1P55316 489 aaPredicted RBP9.21□□□□□ -0.94
CAPN1-225ENST00000533704 ATP5J2P56134 94 aa9.21□□□□□ -0.94
CAPN1-225ENST00000533704 ZSWIM7Q19AV6 140 aa9.21□□□□□ -0.94
CAPN1-225ENST00000533704 LRIF1Q5T3J3 769 aa9.21□□□□□ -0.94
CAPN1-225ENST00000533704 PAQR6Q6TCH4 344 aa9.21□□□□□ -0.94
CAPN1-225ENST00000533704 MSRB3Q8IXL7 192 aa9.21□□□□□ -0.94
CAPN1-225ENST00000533704 ZNF611Q8N823 705 aa9.21□□□□□ -0.94
CAPN1-225ENST00000533704 OR52E4Q8NGH9 312 aa9.21□□□□□ -0.94
CAPN1-225ENST00000533704 RNF217Q8TC41 542 aa9.21□□□□□ -0.94
CAPN1-225ENST00000533704 CKAP2Q8WWK9 683 aa9.21□□□□□ -0.94
CAPN1-225ENST00000533704 FBXW5Q969U6 566 aa9.21□□□□□ -0.94
CAPN1-225ENST00000533704 MAGEB18Q96M61 343 aa9.21□□□□□ -0.94
CAPN1-225ENST00000533704 USB1Q9BQ65 265 aaKnown RBP9.21□□□□□ -0.94
CAPN1-225ENST00000533704 TMEM204Q9BSN7 226 aa9.21□□□□□ -0.94
CAPN1-225ENST00000533704 NPHS2Q9NP85 383 aa9.21□□□□□ -0.94
CAPN1-225ENST00000533704 VAPAQ9P0L0 249 aa9.21□□□□□ -0.94
CAPN1-225ENST00000533704 SLC9A8Q9Y2E8 581 aa9.21□□□□□ -0.94
CAPN1-225ENST00000533704 CHST2Q9Y4C5 530 aa9.21□□□□□ -0.94
CAPN1-225ENST00000533704 FLVCR1Q9Y5Y0 555 aa9.21□□□□□ -0.94
CAPN1-225ENST00000533704 NF1P21359 2839 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 A0A1W2PP18 115 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 TRIM64A6NGJ6 449 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 TRIM64BA6NI03 449 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 LIPT2A6NK58 231 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 OR5H1A6NKK0 313 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 ELOA3DA6NLF2 546 aaPredicted RBP9.2□□□□□ -0.94
CAPN1-225ENST00000533704 A8MVM7 634 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 EVPLLA8MZ36 301 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 AHSA1O95433 338 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 CNOT4O95628 575 aaKnown RBP9.2□□□□□ -0.94
CAPN1-225ENST00000533704 ARAFP10398 606 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 BMP2P12643 396 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 HOXB9P17482 250 aaPredicted RBP9.2□□□□□ -0.94
CAPN1-225ENST00000533704 CDH2P19022 906 aaPredicted RBP9.2□□□□□ -0.94
CAPN1-225ENST00000533704 PPIBP23284 216 aaKnown RBP9.2□□□□□ -0.94
CAPN1-225ENST00000533704 GTF2E2P29084 291 aaKnown RBP9.2□□□□□ -0.94
CAPN1-225ENST00000533704 MRPL19P49406 292 aaKnown RBP9.2□□□□□ -0.94
CAPN1-225ENST00000533704 ATP4BP51164 291 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 MAP2K6P52564 334 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 RPS4XP62701 263 aaKnown RBP9.2□□□□□ -0.94
CAPN1-225ENST00000533704 H3F3AP84243 136 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 CDK6Q00534 326 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 SCARB2Q14108 478 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 SLC17A1Q14916 467 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 ELOA3BQ3SY89 546 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 TIMM23BQ5SRD1 257 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 C1orf140Q5VVS0 124 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 PRAMEF8Q5VWM4 474 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 PRAMEF7Q5VXH5 474 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 TMEM225Q6GV28 225 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 SEZ6L2Q6UXD5 910 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 AAED1Q7RTV5 226 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 BIVMQ86UB2 503 aa9.2□□□□□ -0.94
CAPN1-225ENST00000533704 KRT73Q86Y46 540 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms