RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 MUC15Q8N387 334 aa20.08■□□□□ 0.81
PKP3-210ENST00000533249 CNOT9Q92600 299 aaKnown RBP20.08■□□□□ 0.81
PKP3-210ENST00000533249 NEURL3Q96EH8 262 aa20.08■□□□□ 0.81
PKP3-210ENST00000533249 SLC35A5Q9BS91 424 aa20.08■□□□□ 0.81
PKP3-210ENST00000533249 EXOSC3Q9NQT5 275 aaKnown RBP20.08■□□□□ 0.81
PKP3-210ENST00000533249 TMEM181Q9P2C4 612 aa20.08■□□□□ 0.81
PKP3-210ENST00000533249 MALT1Q9UDY8 824 aa20.08■□□□□ 0.81
PKP3-210ENST00000533249 MXRA5Q9NR99 2828 aa20.08■□□□□ 0.8
PKP3-210ENST00000533249 STAB1Q9NY15 2570 aa20.07■□□□□ 0.8
PKP3-210ENST00000533249 PRAMEF27A3QJZ7 478 aa20.07■□□□□ 0.8
PKP3-210ENST00000533249 AP3D1O14617 1153 aa20.07■□□□□ 0.8
PKP3-210ENST00000533249 C1QCP02747 245 aa20.07■□□□□ 0.8
PKP3-210ENST00000533249 ITGA5P08648 1049 aa20.07■□□□□ 0.8
PKP3-210ENST00000533249 CLK1P49759 484 aaKnown RBP20.07■□□□□ 0.8
PKP3-210ENST00000533249 RAB35Q15286 201 aa20.07■□□□□ 0.8
PKP3-210ENST00000533249 CHRFAM7AQ494W8 412 aa20.07■□□□□ 0.8
PKP3-210ENST00000533249 SPANXN4Q5MJ08 99 aa20.07■□□□□ 0.8
PKP3-210ENST00000533249 OR10H5Q8NGA6 315 aa20.07■□□□□ 0.8
PKP3-210ENST00000533249 THOC1Q96FV9 657 aaKnown RBP20.07■□□□□ 0.8
PKP3-210ENST00000533249 MUS81Q96NY9 551 aa20.07■□□□□ 0.8
PKP3-210ENST00000533249 ZNF317Q96PQ6 595 aaPredicted RBP20.07■□□□□ 0.8
PKP3-210ENST00000533249 HAO1Q9UJM8 370 aa20.07■□□□□ 0.8
PKP3-210ENST00000533249 TMED7-TICAM2A0A0A6YYA0 188 aa20.06■□□□□ 0.8
PKP3-210ENST00000533249 TRPC5OSA6NMA1 111 aa20.06■□□□□ 0.8
PKP3-210ENST00000533249 HDAC3O15379 428 aa20.06■□□□□ 0.8
PKP3-210ENST00000533249 FKBP2P26885 142 aaKnown RBP20.06■□□□□ 0.8
PKP3-210ENST00000533249 OR7E24Q6IFN5 339 aa20.06■□□□□ 0.8
PKP3-210ENST00000533249 ZNF525Q8N782 197 aa20.06■□□□□ 0.8
PKP3-210ENST00000533249 TESCQ96BS2 214 aa20.06■□□□□ 0.8
PKP3-210ENST00000533249 NPHS2Q9NP85 383 aa20.06■□□□□ 0.8
PKP3-210ENST00000533249 UPB1Q9UBR1 384 aa20.06■□□□□ 0.8
PKP3-210ENST00000533249 TRAPPC4Q9Y296 219 aa20.06■□□□□ 0.8
PKP3-210ENST00000533249 TMED7Q9Y3B3 224 aa20.06■□□□□ 0.8
PKP3-210ENST00000533249 ATP23Q9Y6H3 246 aa20.06■□□□□ 0.8
PKP3-210ENST00000533249 HEATR1Q9H583 2144 aaKnown RBP20.06■□□□□ 0.8
PKP3-210ENST00000533249 A0A096LNT2 108 aa20.05■□□□□ 0.8
PKP3-210ENST00000533249 HMGN4O00479 90 aa20.05■□□□□ 0.8
PKP3-210ENST00000533249 DSCR9P59020 149 aa20.05■□□□□ 0.8
PKP3-210ENST00000533249 CBX1P83916 185 aa20.05■□□□□ 0.8
PKP3-210ENST00000533249 SYPL1Q16563 259 aa20.05■□□□□ 0.8
PKP3-210ENST00000533249 TMEM249Q2WGJ8 235 aa20.05■□□□□ 0.8
PKP3-210ENST00000533249 FAM174BQ3ZCQ3 159 aa20.05■□□□□ 0.8
PKP3-210ENST00000533249 C6orf52Q5T4I8 152 aa20.05■□□□□ 0.8
PKP3-210ENST00000533249 AP1ARQ63HQ0 302 aa20.05■□□□□ 0.8
PKP3-210ENST00000533249 ANKFN1Q8N957 763 aa20.05■□□□□ 0.8
PKP3-210ENST00000533249 WDR31Q8NA23 367 aa20.05■□□□□ 0.8
PKP3-210ENST00000533249 DDIT4LQ96D03 193 aa20.05■□□□□ 0.8
PKP3-210ENST00000533249 INPP5KQ9BT40 448 aa20.05■□□□□ 0.8
PKP3-210ENST00000533249 RABEP2Q9H5N1 569 aa20.05■□□□□ 0.8
PKP3-210ENST00000533249 SLC7A10Q9NS82 523 aa20.05■□□□□ 0.8
PKP3-210ENST00000533249 OSGIN1Q9UJX0 560 aa20.05■□□□□ 0.8
PKP3-210ENST00000533249 FLVCR1Q9Y5Y0 555 aa20.05■□□□□ 0.8
PKP3-210ENST00000533249 USH1CQ9Y6N9 552 aa20.05■□□□□ 0.8
PKP3-210ENST00000533249 TMEM72A0PK05 275 aa20.04■□□□□ 0.8
PKP3-210ENST00000533249 SHOX2O60902 331 aaPredicted RBP20.04■□□□□ 0.8
PKP3-210ENST00000533249 TGDSO95455 350 aa20.04■□□□□ 0.8
PKP3-210ENST00000533249 IMPDH2P12268 514 aa20.04■□□□□ 0.8
PKP3-210ENST00000533249 LBPP18428 481 aa20.04■□□□□ 0.8
PKP3-210ENST00000533249 S100A3P33764 101 aa20.04■□□□□ 0.8
PKP3-210ENST00000533249 HTR3AP46098 478 aa20.04■□□□□ 0.8
PKP3-210ENST00000533249 POLR2HP52434 150 aaKnown RBP20.04■□□□□ 0.8
PKP3-210ENST00000533249 CLNS1AP54105 237 aaKnown RBP20.04■□□□□ 0.8
PKP3-210ENST00000533249 SLC35A1P78382 337 aa20.04■□□□□ 0.8
PKP3-210ENST00000533249 H3F3AP84243 136 aa20.04■□□□□ 0.8
PKP3-210ENST00000533249 SF3A3Q12874 501 aaKnown RBP eCLIP20.04■□□□□ 0.8
PKP3-210ENST00000533249 RNF130Q86XS8 419 aa20.04■□□□□ 0.8
PKP3-210ENST00000533249 TNFRSF13CQ96RJ3 184 aa20.04■□□□□ 0.8
PKP3-210ENST00000533249 NAA11Q9BSU3 229 aaPredicted RBP20.04■□□□□ 0.8
PKP3-210ENST00000533249 NUF2Q9BZD4 464 aa20.04■□□□□ 0.8
PKP3-210ENST00000533249 PARPBPQ9NWS1 579 aa20.04■□□□□ 0.8
PKP3-210ENST00000533249 DCTN4Q9UJW0 460 aa20.04■□□□□ 0.8
PKP3-210ENST00000533249 SLC9A8Q9Y2E8 581 aa20.04■□□□□ 0.8
PKP3-210ENST00000533249 E9PBE3 544 aa20.03■□□□□ 0.8
PKP3-210ENST00000533249 PDLIM1O00151 329 aa20.03■□□□□ 0.8
PKP3-210ENST00000533249 EIF1BO60739 113 aaKnown RBP20.03■□□□□ 0.8
PKP3-210ENST00000533249 DRD4P21917 467 aa20.03■□□□□ 0.8
PKP3-210ENST00000533249 TACR3P29371 465 aa20.03■□□□□ 0.8
PKP3-210ENST00000533249 AQP5P55064 265 aa20.03■□□□□ 0.8
PKP3-210ENST00000533249 NME5P56597 212 aa20.03■□□□□ 0.8
PKP3-210ENST00000533249 SLC25A3Q00325 362 aa20.03■□□□□ 0.8
PKP3-210ENST00000533249 DPY19L1Q2PZI1 675 aa20.03■□□□□ 0.8
PKP3-210ENST00000533249 TSPO2Q5TGU0 170 aa20.03■□□□□ 0.8
PKP3-210ENST00000533249 ZNF544Q6NX49 715 aa20.03■□□□□ 0.8
PKP3-210ENST00000533249 PHC2Q8IXK0 858 aa20.03■□□□□ 0.8
PKP3-210ENST00000533249 PMM1Q92871 262 aa20.03■□□□□ 0.8
PKP3-210ENST00000533249 ELAC2Q9BQ52 826 aaKnown RBP20.03■□□□□ 0.8
PKP3-210ENST00000533249 SIKE1Q9BRV8 207 aa20.03■□□□□ 0.8
PKP3-210ENST00000533249 SLC38A1Q9H2H9 487 aa20.03■□□□□ 0.8
PKP3-210ENST00000533249 FKRPQ9H9S5 495 aa20.03■□□□□ 0.8
PKP3-210ENST00000533249 SLC17A5Q9NRA2 495 aa20.03■□□□□ 0.8
PKP3-210ENST00000533249 A0A0G2JND7 137 aa20.02■□□□□ 0.8
PKP3-210ENST00000533249 ZC3H12DA2A288 527 aaKnown RBP20.02■□□□□ 0.8
PKP3-210ENST00000533249 AGAP5A6NIR3 686 aa20.02■□□□□ 0.8
PKP3-210ENST00000533249 ELOA3DA6NLF2 546 aaPredicted RBP20.02■□□□□ 0.8
PKP3-210ENST00000533249 H7C417 338 aa20.02■□□□□ 0.8
PKP3-210ENST00000533249 ZNF208O43345 1280 aa20.02■□□□□ 0.8
PKP3-210ENST00000533249 CHRM4P08173 479 aa20.02■□□□□ 0.8
PKP3-210ENST00000533249 LOXL1Q08397 574 aaPredicted RBP20.02■□□□□ 0.8
PKP3-210ENST00000533249 ELOA3BQ3SY89 546 aa20.02■□□□□ 0.8
PKP3-210ENST00000533249 NXNQ6DKJ4 435 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms