RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 EQTNQ9NQ60 294 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 ABCB10Q9NRK6 738 aa7.49□□□□□ -1.21
NEDD8-207ENST00000533242 ACSS1Q9NUB1 689 aaPredicted RBP7.49□□□□□ -1.21
NEDD8-207ENST00000533242 ABCA2Q9BZC7 2435 aa7.48□□□□□ -1.21
NEDD8-207ENST00000533242 OR14I1A6ND48 311 aa7.48□□□□□ -1.21
NEDD8-207ENST00000533242 ZNF860A6NHJ4 632 aa7.48□□□□□ -1.21
NEDD8-207ENST00000533242 AGAP5A6NIR3 686 aa7.48□□□□□ -1.21
NEDD8-207ENST00000533242 CHST10O43529 356 aa7.48□□□□□ -1.21
NEDD8-207ENST00000533242 KIAA0513O60268 411 aa7.48□□□□□ -1.21
NEDD8-207ENST00000533242 GALR3O60755 368 aaPredicted RBP7.48□□□□□ -1.21
NEDD8-207ENST00000533242 SLC35G6P0C7Q6 338 aa7.48□□□□□ -1.21
NEDD8-207ENST00000533242 SPNP16150 400 aa7.48□□□□□ -1.21
NEDD8-207ENST00000533242 ATP5A1P25705 553 aaKnown RBP7.48□□□□□ -1.21
NEDD8-207ENST00000533242 SERPINB10P48595 397 aa7.48□□□□□ -1.21
NEDD8-207ENST00000533242 XKP51811 444 aa7.48□□□□□ -1.21
NEDD8-207ENST00000533242 ZNF91Q05481 1191 aa7.48□□□□□ -1.21
NEDD8-207ENST00000533242 LTBQ06643 244 aa7.48□□□□□ -1.21
NEDD8-207ENST00000533242 STEAP3Q658P3 488 aa7.48□□□□□ -1.21
NEDD8-207ENST00000533242 ACSM5Q6NUN0 579 aa7.48□□□□□ -1.21
NEDD8-207ENST00000533242 PLEKHG7Q6ZR37 379 aa7.48□□□□□ -1.21
NEDD8-207ENST00000533242 LINC00299Q6ZSB3 139 aa7.48□□□□□ -1.21
NEDD8-207ENST00000533242 KIF18BQ86Y91 864 aa7.48□□□□□ -1.21
NEDD8-207ENST00000533242 LYSMD2Q8IV50 215 aa7.48□□□□□ -1.21
NEDD8-207ENST00000533242 SLC30A8Q8IWU4 369 aa7.48□□□□□ -1.21
NEDD8-207ENST00000533242 MORN4Q8NDC4 146 aa7.48□□□□□ -1.21
NEDD8-207ENST00000533242 OR4K5Q8NGD3 323 aa7.48□□□□□ -1.21
NEDD8-207ENST00000533242 DOK4Q8TEW6 326 aa7.48□□□□□ -1.21
NEDD8-207ENST00000533242 PTCHD1Q96NR3 888 aa7.48□□□□□ -1.21
NEDD8-207ENST00000533242 NXF2Q9GZY0 626 aaKnown RBP7.48□□□□□ -1.21
NEDD8-207ENST00000533242 POLR2J3Q9H1A7 115 aaKnown RBP7.48□□□□□ -1.21
NEDD8-207ENST00000533242 LIME1Q9H400 295 aa7.48□□□□□ -1.21
NEDD8-207ENST00000533242 INIPQ9NRY2 104 aa7.48□□□□□ -1.21
NEDD8-207ENST00000533242 SACM1LQ9NTJ5 587 aa7.48□□□□□ -1.21
NEDD8-207ENST00000533242 P2RX2Q9UBL9 471 aa7.48□□□□□ -1.21
NEDD8-207ENST00000533242 ADAM29Q9UKF5 820 aa7.48□□□□□ -1.21
NEDD8-207ENST00000533242 CES1P1Q9UKY3 287 aa7.48□□□□□ -1.21
NEDD8-207ENST00000533242 PLEKHA6Q9Y2H5 1048 aa7.48□□□□□ -1.21
NEDD8-207ENST00000533242 TCRBV16S1A1N1A0A5B0 115 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 ACOT7O00154 380 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 KPNA4O00629 521 aaPredicted RBP7.47□□□□□ -1.21
NEDD8-207ENST00000533242 CTDSP2O14595 271 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 SSX4O60224 188 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 PDE9AO76083 593 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 GLI4P10075 376 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 SOX18P35713 384 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 MC3RP41968 323 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 PPP5CP53041 499 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 UGT2B15P54855 530 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 ADAM8P78325 824 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 MAP4K2Q12851 820 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 MLC1Q15049 377 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 CARTPTQ16568 116 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 GXYLT1Q4G148 440 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 TOR1AIP1Q5JTV8 583 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 USP43Q70EL4 1123 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 VRK2Q86Y07 508 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 PARP16Q8N5Y8 322 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 TMEM156Q8N614 296 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 OR9A2Q8NGT5 310 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 KAT2AQ92830 837 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 ZNF764Q96H86 408 aaPredicted RBP7.47□□□□□ -1.21
NEDD8-207ENST00000533242 SDHCQ99643 169 aaPredicted RBP7.47□□□□□ -1.21
NEDD8-207ENST00000533242 TTYH2Q9BSA4 534 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 SARGQ9BW04 601 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 BARHL1Q9BZE3 327 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 CLEC4MQ9H2X3 399 aaPredicted RBP7.47□□□□□ -1.21
NEDD8-207ENST00000533242 EGLN3Q9H6Z9 239 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 ZDHHC11Q9H8X9 412 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 PRDM9Q9NQV7 894 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 CLN6Q9NWW5 311 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 TVP23BQ9NYZ1 205 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 CNOT2Q9NZN8 540 aaKnown RBP7.47□□□□□ -1.21
NEDD8-207ENST00000533242 TMCC3Q9ULS5 477 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 EML6Q6ZMW3 1958 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 IGKV3D-11A0A0A0MRZ8 115 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 A0A0G2JNJ9 132 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 TRBV11-1A0A0K0K1C0 115 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 CENPVL1A0A0U1RR11 272 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 A0A1W2PRQ8 180 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 SH3D21A4FU49 640 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 EFCAB10A6NFE3 127 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 FIGNL2A6NMB9 653 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 NPIPA2E9PIF3 369 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 NPIPA3F8WFD2 350 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 FAAHO00519 579 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 FCMRO60667 390 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 UGT2B17O75795 530 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 UPK1BO75841 260 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 ALOX12P18054 663 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 BUD31P41223 144 aaPredicted RBP7.47□□□□□ -1.21
NEDD8-207ENST00000533242 KIR2DL3P43628 341 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 GPR85P60893 370 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 SNRPGP62308 76 aaKnown RBP7.47□□□□□ -1.21
NEDD8-207ENST00000533242 PPIAP62937 165 aaKnown RBP7.47□□□□□ -1.21
NEDD8-207ENST00000533242 TUBA1BP68363 451 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 BTG2P78543 158 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 PLGLB1Q02325 96 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 CHRNEQ04844 493 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 TMEM201Q5SNT2 666 aa7.47□□□□□ -1.21
NEDD8-207ENST00000533242 TUBA1AQ71U36 451 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms