RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 CYSLTR2Q9NS75 346 aa14.03□□□□□ -0.16
CACNA1E-208ENST00000533229 LANCL2Q9NS86 450 aa14.03□□□□□ -0.16
CACNA1E-208ENST00000533229 NLKQ9UBE8 527 aa14.03□□□□□ -0.16
CACNA1E-208ENST00000533229 COPS3Q9UNS2 423 aa14.03□□□□□ -0.16
CACNA1E-208ENST00000533229 NOX1Q9Y5S8 564 aa14.03□□□□□ -0.16
CACNA1E-208ENST00000533229 LYRM1O43325 122 aa14.03□□□□□ -0.16
CACNA1E-208ENST00000533229 SELENOFO60613 162 aa14.03□□□□□ -0.16
CACNA1E-208ENST00000533229 CD27P26842 260 aa14.03□□□□□ -0.16
CACNA1E-208ENST00000533229 MST1P26927 711 aa14.03□□□□□ -0.16
CACNA1E-208ENST00000533229 OR1D4P47884 311 aa14.03□□□□□ -0.16
CACNA1E-208ENST00000533229 NRG3P56975 720 aa14.03□□□□□ -0.16
CACNA1E-208ENST00000533229 RPS4XP62701 263 aaKnown RBP14.03□□□□□ -0.16
CACNA1E-208ENST00000533229 FNDC7Q5VTL7 733 aa14.03□□□□□ -0.16
CACNA1E-208ENST00000533229 DPY19L2P2Q6ZN68 376 aa14.03□□□□□ -0.16
CACNA1E-208ENST00000533229 SAMD12Q8N8I0 201 aa14.03□□□□□ -0.16
CACNA1E-208ENST00000533229 OR4M1Q8NGD0 313 aa14.03□□□□□ -0.16
CACNA1E-208ENST00000533229 SLC7A6Q92536 515 aa14.03□□□□□ -0.16
CACNA1E-208ENST00000533229 ZNF578Q96N58 590 aaPredicted RBP14.03□□□□□ -0.16
CACNA1E-208ENST00000533229 SMAD5Q99717 465 aaKnown RBP14.03□□□□□ -0.16
CACNA1E-208ENST00000533229 BEX2Q9BXY8 128 aa14.03□□□□□ -0.16
CACNA1E-208ENST00000533229 UCK1Q9HA47 277 aa14.03□□□□□ -0.16
CACNA1E-208ENST00000533229 PDE7BQ9NP56 450 aa14.03□□□□□ -0.16
CACNA1E-208ENST00000533229 GMEB2Q9UKD1 530 aa14.03□□□□□ -0.16
CACNA1E-208ENST00000533229 FITM1A5D6W6 292 aa14.02□□□□□ -0.16
CACNA1E-208ENST00000533229 A8MUA0 341 aa14.02□□□□□ -0.16
CACNA1E-208ENST00000533229 METTL12A8MUP2 240 aa14.02□□□□□ -0.16
CACNA1E-208ENST00000533229 ZNF217O75362 1048 aa14.02□□□□□ -0.16
CACNA1E-208ENST00000533229 OR7A10O76100 309 aa14.02□□□□□ -0.16
CACNA1E-208ENST00000533229 OR2T7P0C7T2 308 aa14.02□□□□□ -0.16
CACNA1E-208ENST00000533229 IGFBP4P22692 258 aa14.02□□□□□ -0.16
CACNA1E-208ENST00000533229 EFNA3P52797 238 aa14.02□□□□□ -0.16
CACNA1E-208ENST00000533229 SLC37A1P57057 533 aa14.02□□□□□ -0.16
CACNA1E-208ENST00000533229 GGTLC2Q14390 218 aa14.02□□□□□ -0.16
CACNA1E-208ENST00000533229 TRAM1Q15629 374 aa14.02□□□□□ -0.16
CACNA1E-208ENST00000533229 ZSWIM7Q19AV6 140 aa14.02□□□□□ -0.16
CACNA1E-208ENST00000533229 TTLL10Q6ZVT0 673 aa14.02□□□□□ -0.16
CACNA1E-208ENST00000533229 FAM71CQ8NEG0 241 aa14.02□□□□□ -0.16
CACNA1E-208ENST00000533229 DUSP18Q8NEJ0 188 aa14.02□□□□□ -0.16
CACNA1E-208ENST00000533229 OR2T27Q8NH04 317 aa14.02□□□□□ -0.16
CACNA1E-208ENST00000533229 UPRTQ96BW1 309 aa14.02□□□□□ -0.16
CACNA1E-208ENST00000533229 ZC3HAV1LQ96H79 300 aaKnown RBP14.02□□□□□ -0.16
CACNA1E-208ENST00000533229 FYTTD1Q96QD9 318 aaKnown RBP14.02□□□□□ -0.16
CACNA1E-208ENST00000533229 CNN2Q99439 309 aaKnown RBP14.02□□□□□ -0.16
CACNA1E-208ENST00000533229 WACQ9BTA9 647 aa14.02□□□□□ -0.16
CACNA1E-208ENST00000533229 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.02□□□□□ -0.16
CACNA1E-208ENST00000533229 NXF5Q9H1B4 397 aaKnown RBP14.02□□□□□ -0.16
CACNA1E-208ENST00000533229 PNO1Q9NRX1 252 aaKnown RBP14.02□□□□□ -0.16
CACNA1E-208ENST00000533229 DDX28Q9NUL7 540 aaKnown RBP14.02□□□□□ -0.16
CACNA1E-208ENST00000533229 UCKL1Q9NWZ5 548 aa14.02□□□□□ -0.16
CACNA1E-208ENST00000533229 ADAM30Q9UKF2 790 aa14.02□□□□□ -0.16
CACNA1E-208ENST00000533229 CA14Q9ULX7 337 aa14.02□□□□□ -0.16
CACNA1E-208ENST00000533229 ZNF337Q9Y3M9 751 aa14.02□□□□□ -0.16
CACNA1E-208ENST00000533229 TLCD2A6NGC4 264 aa14.02□□□□□ -0.17
CACNA1E-208ENST00000533229 FAM47E-STBD1D6RA91 191 aa14.02□□□□□ -0.17
CACNA1E-208ENST00000533229 H0YIG0 161 aa14.02□□□□□ -0.17
CACNA1E-208ENST00000533229 H3BMH7 237 aa14.02□□□□□ -0.17
CACNA1E-208ENST00000533229 OGG1O15527 345 aa14.02□□□□□ -0.17
CACNA1E-208ENST00000533229 SRFP11831 508 aa14.02□□□□□ -0.17
CACNA1E-208ENST00000533229 SPI1P17947 270 aa14.02□□□□□ -0.17
CACNA1E-208ENST00000533229 DIO1P49895 249 aa14.02□□□□□ -0.17
CACNA1E-208ENST00000533229 RPS11P62280 158 aaKnown RBP eCLIP14.02□□□□□ -0.17
CACNA1E-208ENST00000533229 CDK5R1Q15078 307 aa14.02□□□□□ -0.17
CACNA1E-208ENST00000533229 PON3Q15166 354 aa14.02□□□□□ -0.17
CACNA1E-208ENST00000533229 QPRTQ15274 297 aa14.02□□□□□ -0.17
CACNA1E-208ENST00000533229 PLET1Q6UQ28 207 aa14.02□□□□□ -0.17
CACNA1E-208ENST00000533229 PAMR1Q6UXH9 720 aa14.02□□□□□ -0.17
CACNA1E-208ENST00000533229 TPRA1Q86W33 373 aa14.02□□□□□ -0.17
CACNA1E-208ENST00000533229 LRRC28Q86X40 367 aaPredicted RBP14.02□□□□□ -0.17
CACNA1E-208ENST00000533229 SLC35F2Q8IXU6 374 aa14.02□□□□□ -0.17
CACNA1E-208ENST00000533229 OR14A16Q8NHC5 309 aa14.02□□□□□ -0.17
CACNA1E-208ENST00000533229 UBASH3BQ8TF42 649 aa14.02□□□□□ -0.17
CACNA1E-208ENST00000533229 THAP4Q8WY91 577 aa14.02□□□□□ -0.17
CACNA1E-208ENST00000533229 TSLPQ969D9 159 aa14.02□□□□□ -0.17
CACNA1E-208ENST00000533229 MSANTD3Q96H12 275 aa14.02□□□□□ -0.17
CACNA1E-208ENST00000533229 MOGAT1Q96PD6 335 aa14.02□□□□□ -0.17
CACNA1E-208ENST00000533229 NMNAT2Q9BZQ4 307 aa14.02□□□□□ -0.17
CACNA1E-208ENST00000533229 RTN4RQ9BZR6 473 aa14.02□□□□□ -0.17
CACNA1E-208ENST00000533229 RANGRFQ9HD47 186 aaPredicted RBP14.02□□□□□ -0.17
CACNA1E-208ENST00000533229 ACOXLQ9NUZ1 547 aa14.02□□□□□ -0.17
CACNA1E-208ENST00000533229 PRODH2Q9UF12 536 aa14.02□□□□□ -0.17
CACNA1E-208ENST00000533229 KLHL21Q9UJP4 597 aa14.02□□□□□ -0.17
CACNA1E-208ENST00000533229 ZNF346Q9UL40 294 aaKnown RBP14.02□□□□□ -0.17
CACNA1E-208ENST00000533229 TMEM131Q92545 1883 aa14.01□□□□□ -0.17
CACNA1E-208ENST00000533229 FAM171A2A8MVW0 826 aa14.01□□□□□ -0.17
CACNA1E-208ENST00000533229 BLOC1S5-TXNDC5H3BN57 136 aa14.01□□□□□ -0.17
CACNA1E-208ENST00000533229 ARPC3O15145 178 aa14.01□□□□□ -0.17
CACNA1E-208ENST00000533229 PPM1BO75688 479 aa14.01□□□□□ -0.17
CACNA1E-208ENST00000533229 SERPINI2O75830 405 aa14.01□□□□□ -0.17
CACNA1E-208ENST00000533229 ALAS2P22557 587 aa14.01□□□□□ -0.17
CACNA1E-208ENST00000533229 AQP2P41181 271 aa14.01□□□□□ -0.17
CACNA1E-208ENST00000533229 SIRPAP78324 504 aa14.01□□□□□ -0.17
CACNA1E-208ENST00000533229 EGR4Q05215 589 aa14.01□□□□□ -0.17
CACNA1E-208ENST00000533229 SKP2Q13309 424 aa14.01□□□□□ -0.17
CACNA1E-208ENST00000533229 TATDN3Q17R31 274 aa14.01□□□□□ -0.17
CACNA1E-208ENST00000533229 CDONQ4KMG0 1287 aa14.01□□□□□ -0.17
CACNA1E-208ENST00000533229 TCTE1Q5JU00 501 aa14.01□□□□□ -0.17
CACNA1E-208ENST00000533229 ATG4DQ86TL0 474 aaPredicted RBP14.01□□□□□ -0.17
CACNA1E-208ENST00000533229 MS4A15Q8N5U1 240 aa14.01□□□□□ -0.17
CACNA1E-208ENST00000533229 POMGNT2Q8NAT1 580 aa14.01□□□□□ -0.17
CACNA1E-208ENST00000533229 FAM174AQ8TBP5 190 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms