RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 ADAMTS16Q8TE57 1224 aa10.7□□□□□ -0.7
SSBP3-214ENST00000533209 ABHD3Q8WU67 409 aa10.7□□□□□ -0.7
SSBP3-214ENST00000533209 LZICQ8WZA0 190 aa10.7□□□□□ -0.7
SSBP3-214ENST00000533209 FAM162AQ96A26 154 aa10.7□□□□□ -0.7
SSBP3-214ENST00000533209 STARD4Q96DR4 205 aa10.7□□□□□ -0.7
SSBP3-214ENST00000533209 GMPPAQ96IJ6 420 aaPredicted RBP10.7□□□□□ -0.7
SSBP3-214ENST00000533209 C1orf21Q9H246 121 aa10.7□□□□□ -0.7
SSBP3-214ENST00000533209 TAS2R1Q9NYW7 299 aa10.7□□□□□ -0.7
SSBP3-214ENST00000533209 JKAMPQ9P055 326 aa10.7□□□□□ -0.7
SSBP3-214ENST00000533209 CLEC4AQ9UMR7 237 aa10.7□□□□□ -0.7
SSBP3-214ENST00000533209 TRAPPC13A5PLN9 417 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 ZNF814B7Z6K7 855 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 CHP2O43745 196 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 CYTIPO60759 359 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 FZD7O75084 574 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 PRKD3O94806 890 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 CGAP01215 116 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 GPIP06744 558 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 FPR1P21462 350 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 COL8A1P27658 744 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 SIRPAP78324 504 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 SLC35A1P78382 337 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 H3F3AP84243 136 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 RNPS1Q15287 305 aaKnown RBP10.69□□□□□ -0.7
SSBP3-214ENST00000533209 FBXL19-AS1Q494R0 122 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 EEF1A1P5Q5VTE0 462 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 GTF2IRD2BQ6EKJ0 949 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 ABLIM2Q6H8Q1 611 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 WDR88Q6ZMY6 472 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 DEF8Q6ZN54 512 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 FAM214BQ7L5A3 538 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 BTLAQ7Z6A9 289 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 GTF2IRD2Q86UP8 949 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 P3H2Q8IVL5 708 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 SLC43A2Q8N370 569 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 CNEP1R1Q8N9A8 125 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 RNF217Q8TC41 542 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 KTI12Q96EK9 354 aaPredicted RBP10.69□□□□□ -0.7
SSBP3-214ENST00000533209 HSH2DQ96JZ2 352 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 PSD2Q9BQI7 771 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 PTDSS2Q9BVG9 487 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 PIGMQ9H3S5 423 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 GORASP2Q9H8Y8 452 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 NPDC1Q9NQX5 325 aaPredicted RBP10.69□□□□□ -0.7
SSBP3-214ENST00000533209 GLRX2Q9NS18 164 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 DCAF13Q9NV06 445 aaKnown RBP10.69□□□□□ -0.7
SSBP3-214ENST00000533209 SELENONQ9NZV5 590 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 MAGEL2Q9UJ55 1249 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 ING1Q9UK53 422 aaPredicted RBP10.69□□□□□ -0.7
SSBP3-214ENST00000533209 SNX13Q9Y5W8 968 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 MED12LQ86YW9 2145 aa10.69□□□□□ -0.7
SSBP3-214ENST00000533209 CACNA1CQ13936 2221 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 INTS1Q8N201 2190 aaKnown RBP10.68□□□□□ -0.7
SSBP3-214ENST00000533209 EEF1E1-BLOC1S5C9J1V9 151 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 FTCDNL1E5RQL4 147 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 ARPC2O15144 300 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 EEF1E1O43324 174 aaKnown RBP10.68□□□□□ -0.7
SSBP3-214ENST00000533209 EIF1BO60739 113 aaKnown RBP10.68□□□□□ -0.7
SSBP3-214ENST00000533209 RAMP1O60894 148 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 AHSA1O95433 338 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 PLGP00747 810 aaPredicted RBP10.68□□□□□ -0.7
SSBP3-214ENST00000533209 AGTR1P30556 359 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 RPS5P46782 204 aaKnown RBP10.68□□□□□ -0.7
SSBP3-214ENST00000533209 ASCL1P50553 236 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 BNIP1Q12981 228 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 OR7A5Q15622 319 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 IFI44LQ53G44 452 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 HIST2H2BCQ6DN03 193 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 PAQR6Q6TCH4 344 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 C5orf46Q6UWT4 87 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 GDF7Q7Z4P5 450 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 CCDC103Q8IW40 242 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 MCEMP1Q8IX19 187 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 TUSC5Q8IXB3 177 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 ARHGAP24Q8N264 748 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 FAM86B1Q8N7N1 296 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 ACBD4Q8NC06 268 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 OR6K3Q8NGY3 331 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 MFSD8Q8NHS3 518 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 GEMIN6Q8WXD5 167 aaKnown RBP10.68□□□□□ -0.7
SSBP3-214ENST00000533209 TAAR8Q969N4 342 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 SLC7A6OSQ96CW6 309 aaPredicted RBP10.68□□□□□ -0.7
SSBP3-214ENST00000533209 ZHX1-C8orf76Q96EF9 292 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 SLC41A3Q96GZ6 507 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 TMEM43Q9BTV4 400 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 AMBRA1Q9C0C7 1298 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 POLR2J2Q9GZM3 115 aaKnown RBP10.68□□□□□ -0.7
SSBP3-214ENST00000533209 POLR2J3Q9H1A7 115 aaKnown RBP10.68□□□□□ -0.7
SSBP3-214ENST00000533209 GP6Q9HCN6 339 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 KLHL9Q9P2J3 617 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 KLHL13Q9P2N7 655 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 RPS6KA6Q9UK32 745 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 SLC7A7Q9UM01 511 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 PRPF19Q9UMS4 504 aaKnown RBP10.68□□□□□ -0.7
SSBP3-214ENST00000533209 EMC9Q9Y3B6 208 aa10.68□□□□□ -0.7
SSBP3-214ENST00000533209 TRAV36DV7A0A075B6V5 113 aa10.67□□□□□ -0.7
SSBP3-214ENST00000533209 IGKV3D-15A0A087WSY6 115 aa10.67□□□□□ -0.7
SSBP3-214ENST00000533209 ZNF716A6NP11 495 aa10.67□□□□□ -0.7
SSBP3-214ENST00000533209 MSTNO14793 375 aa10.67□□□□□ -0.7
SSBP3-214ENST00000533209 GMNNO75496 209 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms