RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 UBALD2Q8IYN6 164 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 IP6K3Q96PC2 410 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 ANKRD60Q9BZ19 345 aa13.74□□□□□ -0.21
PCDHA9-202ENST00000532602 HMX3A6NHT5 357 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 PRKACBP22694 351 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 CAV2P51636 162 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 PPP2CBP62714 309 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 PPP2CAP67775 309 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 VHLLQ6RSH7 139 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 MOB3CQ70IA8 216 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 ESX1Q8N693 406 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 MAELQ96JY0 434 aaKnown RBP13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 DDX31Q9H8H2 851 aaKnown RBP13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 WASH6PQ9NQA3 447 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 KDM4EB2RXH2 506 aaPredicted RBP13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 EDN3P14138 238 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 CX3CR1P49238 355 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 TMEM163Q8TC26 289 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 ADAMTS14Q8WXS8 1223 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 BORCS7Q96B45 105 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 SLC25A18Q9H1K4 315 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 TBCCD1Q9NVR7 557 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 AK6Q9Y3D8 172 aaKnown RBP13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 CAMLGP49069 296 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 PFN3P60673 137 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 ACSM3Q53FZ2 586 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 VASNQ6EMK4 673 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 SLC16A9Q7RTY1 509 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 OR5M1Q8NGP8 315 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 PIGCQ92535 297 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 PPP1R14DQ9NXH3 145 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 GMPR2Q9P2T1 348 aaKnown RBP13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 A0A1W2PQL4 384 aaPredicted RBP13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 DOK2O60496 412 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 SC5DO75845 299 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 CBX7O95931 251 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 CYB561P49447 251 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 OTUD1Q5VV17 481 aaPredicted RBP13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 SLX4IPQ5VYV7 408 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 L3MBTL4Q8NA19 623 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 MAFIPQ8WZ33 124 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 PRRT1Q99946 306 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 ST6GALNAC5Q9BVH7 336 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 MS4A8Q9BY19 250 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 EGLN3Q9H6Z9 239 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 UBFD1O14562 309 aaKnown RBP13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 DVL2O14641 736 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 GPRIN2O60269 458 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 LSMEM2Q8N112 164 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 OR8J2Q8NGG1 315 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 PSMF1Q92530 271 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 COQ3Q9NZJ6 369 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 MOKQ9UQ07 419 aa13.73□□□□□ -0.21
PCDHA9-202ENST00000532602 IFNA10P01566 189 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 TACR3P29371 465 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 SSTR4P31391 388 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 FRMPD2BQ6IN97 320 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 TPRA1Q86W33 373 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 SLC35F3Q8IY50 421 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 FAM83FQ8NEG4 500 aaPredicted RBP13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 GTF2H4Q92759 462 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 ARRDC1-AS1Q9H2J1 176 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 HIPK2Q9H2X6 1198 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 hCG_1809904A0A1W2PP81 198 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 A0A1W2PPE2 198 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 A0A1W2PR64 198 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 A0A1W2PRV1 198 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 H7C1C5 153 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 TAS2R20P59543 309 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 LCN6P62502 163 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 TSPAN31Q12999 210 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 POC1BQ8TC44 478 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 CNOT9Q92600 299 aaKnown RBP13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 RSPRY1Q96DX4 576 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 V9GY05 133 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 SSX5O60225 188 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 ALOX12BO75342 701 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 ENPP1P22413 925 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 SLC22A6Q4U2R8 563 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 CCBE1Q6UXH8 406 aaPredicted RBP13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 ADGRG5Q8IZF4 528 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 NUDT8Q8WV74 236 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 MSI2Q96DH6 328 aaKnown RBP13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 UBXN10Q96LJ8 280 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 C1orf198Q9H425 327 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 RLIMQ9NVW2 624 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 ZNF780AO75290 641 aaPredicted RBP13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 GABRR1P24046 479 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 PPP5CP53041 499 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 CLDN17P56750 224 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 COX20Q5RI15 118 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 TMEM207Q6UWW9 146 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 SULT4A1Q9BR01 284 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 METTL9Q9H1A3 318 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 TSPAN10Q9H1Z9 355 aaPredicted RBP13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 HAO2Q9NYQ3 351 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 IFNA4P05014 189 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 TPOP07202 933 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 BMXP51813 675 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms