RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 ACVR1BP36896 505 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 RIDAP52758 137 aaKnown RBP6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 MANFP55145 182 aaKnown RBP6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 GSG1Q2KHT4 349 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 NHLRC3Q5JS37 347 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 TEX30Q5JUR7 227 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 FRG2Q64ET8 278 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 TMEM71Q6P5X7 295 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 SMARCD3Q6STE5 483 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 PAQR6Q6TCH4 344 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 RANBP10Q6VN20 620 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 HIST3H2AQ7L7L0 130 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 ADIPOR2Q86V24 386 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 ZNF383Q8NA42 475 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 DNAAF1Q8NEP3 725 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 GNPDA2Q8TDQ7 276 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 APH1BQ8WW43 257 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 HIST1H2ACQ93077 130 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 RGMAQ96B86 450 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 SPACA7Q96KW9 195 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 FRG2BQ96QU4 278 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 CHRDQ9H2X0 955 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 PRSS16Q9NQE7 514 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 TREX1Q9NSU2 369 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 BTNL2Q9UIR0 455 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 FBXL4Q9UKA2 621 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 PCDHB10Q9UN67 800 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 CAMK2AQ9UQM7 478 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 GPR52Q9Y2T5 361 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 KPTNQ9Y664 436 aa6.32□□□□□ -1.4
TGFBR3-209ENST00000532540 A0A1B0GTQ1 180 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 TVP23AA6NH52 213 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 SLC9B1P1A6NJY1 282 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 MAN2B1O00754 1011 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 SIGLEC5O15389 551 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 ACAA1P09110 424 aaPredicted RBP6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 SRFP11831 508 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 TYRP1P17643 537 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 PCGF2P35227 344 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 OPRD1P41143 372 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 SNRPGP62308 76 aaKnown RBP6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 RPP30P78346 268 aaKnown RBP6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 DGCR2P98153 550 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 ZNF616Q08AN1 781 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 SIGLEC14Q08ET2 396 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 SMAD2Q15796 467 aaKnown RBP6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 ZNF805Q5CZA5 627 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 TMEM196Q5HYL7 178 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 OR52W1Q6IF63 320 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 REEP3Q6NUK4 255 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 ZNF585AQ6P3V2 769 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 SFXN4Q6P4A7 337 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 FIGNL1Q6PIW4 674 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 FAM180AQ6UWF9 173 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 CERS6Q6ZMG9 384 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 MAMSTRQ6ZN01 415 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 UBE2R2Q712K3 238 aaPredicted RBP6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 CLECL1Q8IZS7 167 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 OR52I1Q8NGK6 324 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 OR2I1PQ8NGU4 316 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 OR8S1Q8NH09 359 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 OR2L2Q8NH16 312 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 OR5AK3PQ8NH89 298 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 DUSP19Q8WTR2 217 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 CHTF18Q8WVB6 975 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 SPRYD4Q8WW59 207 aaPredicted RBP6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 TAAR8Q969N4 342 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 TBC1D20Q96BZ9 403 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 MTERF1Q99551 399 aaKnown RBP6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 PBDC1Q9BVG4 233 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 PRR14Q9BWN1 585 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 BOCQ9BWV1 1114 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 ZDHHC5Q9C0B5 715 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 ATG5Q9H1Y0 275 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 TSPAN10Q9H1Z9 355 aaPredicted RBP6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 TCEAL2Q9H3H9 227 aaPredicted RBP6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 UNKLQ9H9P5 680 aaKnown RBP6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 SERGEFQ9UGK8 458 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 TINAGQ9UJW2 476 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 ZNF223Q9UK11 482 aaPredicted RBP6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 FLVCR2Q9UPI3 526 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 MEMO1Q9Y316 297 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 NCOR2Q9Y618 2525 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 GXYLT2A0PJZ3 443 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 RIIAD1A6NNX1 92 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 EEF1E1-BLOC1S5C9J1V9 151 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 UCHL1P09936 223 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 ACP2P11117 423 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 C6P13671 934 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 AMD1P17707 334 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 ACHEP22303 614 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 TAS2R60P59551 318 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 PDZD11Q5EBL8 140 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 GRHL2Q6ISB3 625 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 PLBD1Q6P4A8 553 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 RBMS3Q6XE24 437 aaKnown RBP6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 FRRS1Q6ZNA5 592 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 PHYKPLQ8IUZ5 450 aa6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 PUSL1Q8N0Z8 303 aaKnown RBP6.31□□□□□ -1.4
TGFBR3-209ENST00000532540 C15orf54Q8N8G6 183 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms