RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 ATP4BP51164 291 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 PRKXP51817 358 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 CCNHP51946 323 aaPredicted RBP3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 HSPA2P54652 639 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 PAX9P55771 341 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 PAX2Q02962 417 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 TLE4Q04727 773 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 ZNF33BQ06732 778 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 SELENBP1Q13228 472 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 SRSF7Q16629 238 aaKnown RBP eCLIP3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 DUSP7Q16829 419 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 TRIM16LQ309B1 348 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 KLHL22Q53GT1 634 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 LY6G6FQ5SQ64 297 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 CCDC137Q6PK04 289 aaKnown RBP3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 RBMS3Q6XE24 437 aaKnown RBP3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 ADAMTSL5Q6ZMM2 481 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 TMPRSS11AQ6ZMR5 421 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 Q6ZSR3 168 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 FOXL2NBQ6ZUU3 175 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 SLC35D2Q76EJ3 337 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 PID1Q7Z2X4 250 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 NUFIP2Q7Z417 695 aaKnown RBP3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 SLC26A11Q86WA9 606 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 CATSPER1Q8NEC5 780 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 KLHDC9Q8NEP7 349 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 OR52H1Q8NGJ2 320 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 TM9SF4Q92544 642 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 GTF3AQ92664 365 aaKnown RBP3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 UFD1Q92890 307 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 CD101Q93033 1021 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 TMEM80Q96HE8 168 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 SEC22AQ96IW7 307 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 RNF2Q99496 336 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 ATP5SQ99766 215 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 ZYG11BQ9C0D3 744 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 OR51M1Q9H341 326 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 GOLPH3Q9H4A6 298 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 UXTQ9UBK9 157 aaPredicted RBP3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 ZNF282Q9UDV7 671 aaPredicted RBP3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 KIF25Q9UIL4 384 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 CDH10Q9Y6N8 788 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 GAKO14976 1311 aa3.62□□□□□ -1.83
AC055878.1-201ENST00000531858 KAT6AQ92794 2004 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 IGHV3-20A0A0C4DH32 117 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 TRBV5-4A0A0C4DH59 114 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 IGLON5A6NGN9 336 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 GLTPD2A6NH11 291 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 OR5B21A6NL26 309 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 BLOC1S5-TXNDC5H3BN57 136 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 H3BNX3 289 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 H7C0C1 242 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 K7ERI5 159 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 HSD17B6O14756 317 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 AIREO43918 545 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 PCDH7O60245 1069 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 SCN2BO60939 215 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 OR7A10O76100 309 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 C1orf105O95561 183 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 TSPAN13O95857 204 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 NGFRP08138 427 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 DPEP1P16444 411 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 BGNP21810 368 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 OXTRP30559 389 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 ACVRL1P37023 503 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 TFPI2P48307 235 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 POU3F4P49335 361 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 TMED10P49755 219 aaKnown RBP3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 PLTPP55058 493 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 UCNP55089 124 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 PEX3P56589 373 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 GSCP56915 257 aaPredicted RBP3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 FBXW4P57775 412 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 LCN2P80188 198 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 CYCSP99999 105 aaKnown RBP3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 DHODHQ02127 395 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 COL10A1Q03692 680 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 ZNF154Q13106 437 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 KIAA0141Q14154 515 aaPredicted RBP3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 FHL2Q14192 279 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 SF3A2Q15428 464 aaKnown RBP3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 MOGAT2Q3SYC2 334 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 GTDC1Q4AE62 458 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 PTPN20Q4JDL3 420 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 PAN3Q58A45 887 aaKnown RBP3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 MUC21Q5SSG8 566 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 FAM120AOSQ5T036 256 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 MEDAGQ5VYS4 303 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 PTRHD1Q6GMV3 140 aaKnown RBP3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 ASCL4Q6XD76 172 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 GDPD3Q7L5L3 318 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 SLC26A9Q7LBE3 791 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 TRPT1Q86TN4 253 aaKnown RBP3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 PRIMA1Q86XR5 153 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 APOBEC3FQ8IUX4 373 aaKnown RBP3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 DCUN1D3Q8IWE4 304 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 SLC39A11Q8N1S5 342 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 FAM86B1Q8N7N1 296 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 ATP6V0D2Q8N8Y2 350 aa3.61□□□□□ -1.83
AC055878.1-201ENST00000531858 LRRC75AQ8NAA5 344 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms