RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 CHRNB3Q05901 458 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 ZNF33AQ06730 810 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 BST1Q10588 318 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 STX3Q13277 289 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 PON3Q15166 354 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 SLC22A6Q4U2R8 563 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 LACTB2Q53H82 288 aaPredicted RBP2.85□□□□□ -1.95
PTPRK-220ENST00000531466 LBHQ53QV2 105 aaPredicted RBP2.85□□□□□ -1.95
PTPRK-220ENST00000531466 LRRC73Q5JTD7 316 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 GPR157Q5UAW9 335 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 C1orf146Q5VVC0 180 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 METTL21CQ5VZV1 264 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 DUPD1Q68J44 220 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 SPOPLQ6IQ16 392 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 HORMAD1Q86X24 394 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 VRK2Q86Y07 508 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 UBL4BQ8N7F7 174 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 GATSQ8NAP1 163 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 NECAP1Q8NC96 275 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 CCDC197Q8NCU1 140 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 TMEM104Q8NE00 496 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 OR5T3Q8NGG3 340 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 TRMT10AQ8TBZ6 339 aaKnown RBP2.85□□□□□ -1.95
PTPRK-220ENST00000531466 DTD1Q8TEA8 209 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 PHYHIPQ92561 330 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 HAS2Q92819 552 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 ZNF707Q96C28 371 aaPredicted RBP2.85□□□□□ -1.95
PTPRK-220ENST00000531466 ECHDC3Q96DC8 303 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 DTD2Q96FN9 168 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 DUS3LQ96G46 650 aaKnown RBP2.85□□□□□ -1.95
PTPRK-220ENST00000531466 BSCL2Q96G97 398 aaPredicted RBP2.85□□□□□ -1.95
PTPRK-220ENST00000531466 C9orf72Q96LT7 481 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 RANBP9Q96S59 729 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 OMDQ99983 421 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 NAT9Q9BTE0 207 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 PRRG4Q9BZD6 226 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 NMNAT2Q9BZQ4 307 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 TM6SF2Q9BZW4 377 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 RACGAP1Q9H0H5 632 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 RAB1BQ9H0U4 201 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 OPN3Q9H1Y3 402 aaPredicted RBP2.85□□□□□ -1.95
PTPRK-220ENST00000531466 GANQ9H2C0 597 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 WDR76Q9H967 626 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 SGK2Q9HBY8 427 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 APMAPQ9HDC9 416 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 CCNB1IP1Q9NPC3 277 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 GSN-AS1Q9NRJ2 163 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 PARVAQ9NVD7 372 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 SLC2A8Q9NY64 477 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 USE1Q9NZ43 259 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 CNOT2Q9NZN8 540 aaKnown RBP2.85□□□□□ -1.95
PTPRK-220ENST00000531466 STOX2Q9P2F5 926 aaPredicted RBP2.85□□□□□ -1.95
PTPRK-220ENST00000531466 UVRAGQ9P2Y5 699 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 KLK11Q9UBX7 282 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 NOCTQ9UK39 431 aaKnown RBP2.85□□□□□ -1.95
PTPRK-220ENST00000531466 RPH3ALQ9UNE2 315 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 FLVCR2Q9UPI3 526 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 MRPS33Q9Y291 106 aaKnown RBP2.85□□□□□ -1.95
PTPRK-220ENST00000531466 CA5BQ9Y2D0 317 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 NPTNQ9Y639 398 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 LRPPRCP42704 1394 aaKnown RBP2.85□□□□□ -1.95
PTPRK-220ENST00000531466 RTL9Q8NET4 1388 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 SCAPERQ9BY12 1400 aa2.85□□□□□ -1.95
PTPRK-220ENST00000531466 A0A0A6YYC8 382 aaPredicted RBP2.84□□□□□ -1.95
PTPRK-220ENST00000531466 MBLAC1A4D2B0 266 aaPredicted RBP2.84□□□□□ -1.95
PTPRK-220ENST00000531466 ARHGEF35A5YM69 484 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 CASTOR2A6NHX0 329 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 WASHC1A8K0Z3 465 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 WASH3PC4AMC7 463 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 I3L1I5 382 aaPredicted RBP2.84□□□□□ -1.95
PTPRK-220ENST00000531466 ABCD4O14678 606 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 SCAMP2O15127 329 aaKnown RBP2.84□□□□□ -1.95
PTPRK-220ENST00000531466 CSO75390 466 aaKnown RBP2.84□□□□□ -1.95
PTPRK-220ENST00000531466 GPX5O75715 221 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 ATP6AP2O75787 350 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 OR6A2O95222 327 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 PIGRP01833 764 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 CTXN2P0C2S0 81 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 DBTP11182 482 aaKnown RBP2.84□□□□□ -1.95
PTPRK-220ENST00000531466 HNF1AP20823 631 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 DTYMKP23919 212 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 HSD11B1P28845 292 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 OTX1P32242 354 aaPredicted RBP2.84□□□□□ -1.95
PTPRK-220ENST00000531466 CD80P33681 288 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 NUDT1P36639 197 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 DLSTP36957 453 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 BRCC3P46736 316 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 TGM4P49221 684 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 TMED10P49755 219 aaKnown RBP2.84□□□□□ -1.95
PTPRK-220ENST00000531466 NUMBP49757 651 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 EMP2P54851 167 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 OR1D5P58170 312 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 PTENP60484 403 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 SLC17A1Q14916 467 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 PDK2Q15119 407 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 MLF2Q15773 248 aaPredicted RBP2.84□□□□□ -1.95
PTPRK-220ENST00000531466 PSG3Q16557 428 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 PTGISQ16647 500 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 SLC5A12Q1EHB4 618 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 TRIM16LQ309B1 348 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms