RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 C10orf105Q8TEF2 133 aa13.86□□□□□ -0.19
CHMP4A-204ENST00000530996 NANOS1Q8WY41 292 aaKnown RBP13.86□□□□□ -0.19
CHMP4A-204ENST00000530996 PMM1Q92871 262 aa13.86□□□□□ -0.19
CHMP4A-204ENST00000530996 C3orf49Q96BT1 292 aa13.86□□□□□ -0.19
CHMP4A-204ENST00000530996 ZG16BQ96DA0 208 aa13.86□□□□□ -0.19
CHMP4A-204ENST00000530996 MUS81Q96NY9 551 aa13.86□□□□□ -0.19
CHMP4A-204ENST00000530996 PIMREGQ9BSJ6 248 aa13.86□□□□□ -0.19
CHMP4A-204ENST00000530996 NUF2Q9BZD4 464 aa13.86□□□□□ -0.19
CHMP4A-204ENST00000530996 SAP130Q9H0E3 1048 aa13.86□□□□□ -0.19
CHMP4A-204ENST00000530996 MOKQ9UQ07 419 aa13.86□□□□□ -0.19
CHMP4A-204ENST00000530996 TRAPPC4Q9Y296 219 aa13.86□□□□□ -0.19
CHMP4A-204ENST00000530996 FREM1Q5H8C1 2179 aa13.86□□□□□ -0.19
CHMP4A-204ENST00000530996 CADP27708 2225 aa13.86□□□□□ -0.19
CHMP4A-204ENST00000530996 CFAP73A6NFT4 308 aa13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 HMGN4O00479 90 aa13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 ZNF208O43345 1280 aa13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 GPIP06744 558 aa13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 GUSBP08236 651 aa13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 IGHV4-31P0DP07 118 aa13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 NR2F1P10589 423 aa13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 IMPDH2P12268 514 aa13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 IL7RP16871 459 aa13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 LBPP18428 481 aa13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 MPGP29372 298 aa13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 APOBEC3AP31941 199 aaPredicted RBP13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 PDLIM4P50479 330 aa13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 VSNL1P62760 191 aa13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 PLAURQ03405 335 aa13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 OR7A5Q15622 319 aa13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 SYPL1Q16563 259 aa13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 KRT71Q3SY84 523 aa13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 HIKESHIQ53FT3 197 aa13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 MRPL2Q5T653 305 aaKnown RBP13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 PAQR6Q6TCH4 344 aa13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 AAED1Q7RTV5 226 aa13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 SLC46A3Q7Z3Q1 461 aa13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 ABHD12BQ7Z5M8 362 aaPredicted RBP13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 CADM2Q8N3J6 435 aa13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 WDR31Q8NA23 367 aa13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 TRNT1Q96Q11 434 aaKnown RBP13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 PANX1Q96RD7 426 aa13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 TAPBPLQ9BX59 468 aa13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 ROPN1BQ9BZX4 212 aaPredicted RBP13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 ROPN1Q9HAT0 212 aaPredicted RBP13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 CACYBPQ9HB71 228 aaKnown RBP13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 ADPRHL2Q9NX46 363 aa13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 KCNS2Q9ULS6 477 aa13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 RAP2CQ9Y3L5 183 aa13.85□□□□□ -0.19
CHMP4A-204ENST00000530996 ANK3Q12955 4377 aaKnown RBP13.84□□□□□ -0.19
CHMP4A-204ENST00000530996 ZC3H12DA2A288 527 aaKnown RBP13.84□□□□□ -0.19
CHMP4A-204ENST00000530996 AGAP5A6NIR3 686 aa13.84□□□□□ -0.19
CHMP4A-204ENST00000530996 PDLIM1O00151 329 aa13.84□□□□□ -0.19
CHMP4A-204ENST00000530996 KLF11O14901 512 aa13.84□□□□□ -0.19
CHMP4A-204ENST00000530996 TYROBPO43914 113 aa13.84□□□□□ -0.19
CHMP4A-204ENST00000530996 AKR7A3O95154 331 aa13.84□□□□□ -0.19
CHMP4A-204ENST00000530996 CHRM4P08173 479 aa13.84□□□□□ -0.19
CHMP4A-204ENST00000530996 SRD5A1P18405 259 aa13.84□□□□□ -0.19
CHMP4A-204ENST00000530996 CXCR1P25024 350 aa13.84□□□□□ -0.19
CHMP4A-204ENST00000530996 SLC1A3P43003 542 aa13.84□□□□□ -0.19
CHMP4A-204ENST00000530996 ETV4P43268 484 aa13.84□□□□□ -0.19
CHMP4A-204ENST00000530996 CEACAM7Q14002 265 aa13.84□□□□□ -0.19
CHMP4A-204ENST00000530996 CASP8Q14790 479 aa13.84□□□□□ -0.19
CHMP4A-204ENST00000530996 SLC17A1Q14916 467 aa13.84□□□□□ -0.19
CHMP4A-204ENST00000530996 IL17RELQ6ZVW7 336 aa13.84□□□□□ -0.19
CHMP4A-204ENST00000530996 PEX5LQ8IYB4 626 aa13.84□□□□□ -0.19
CHMP4A-204ENST00000530996 POMGNT2Q8NAT1 580 aa13.84□□□□□ -0.19
CHMP4A-204ENST00000530996 OR9K2Q8NGE7 335 aa13.84□□□□□ -0.19
CHMP4A-204ENST00000530996 CCDC115Q96NT0 180 aa13.84□□□□□ -0.19
CHMP4A-204ENST00000530996 ALKBH3Q96Q83 286 aaPredicted RBP13.84□□□□□ -0.19
CHMP4A-204ENST00000530996 SLC38A1Q9H2H9 487 aa13.84□□□□□ -0.19
CHMP4A-204ENST00000530996 RTTNQ86VV8 2226 aa13.84□□□□□ -0.19
CHMP4A-204ENST00000530996 PRAMEF27A3QJZ7 478 aa13.83□□□□□ -0.2
CHMP4A-204ENST00000530996 ZNF587BE7ETH6 402 aa13.83□□□□□ -0.2
CHMP4A-204ENST00000530996 LMX1BO60663 402 aa13.83□□□□□ -0.2
CHMP4A-204ENST00000530996 APEHP13798 732 aaKnown RBP13.83□□□□□ -0.2
CHMP4A-204ENST00000530996 HNF1AP20823 631 aa13.83□□□□□ -0.2
CHMP4A-204ENST00000530996 SLC1A6P48664 564 aa13.83□□□□□ -0.2
CHMP4A-204ENST00000530996 GZMKP49863 264 aa13.83□□□□□ -0.2
CHMP4A-204ENST00000530996 RPL14P50914 215 aaKnown RBP13.83□□□□□ -0.2
CHMP4A-204ENST00000530996 UBE2NP61088 152 aaKnown RBP13.83□□□□□ -0.2
CHMP4A-204ENST00000530996 LSM11P83369 360 aaKnown RBP eCLIP13.83□□□□□ -0.2
CHMP4A-204ENST00000530996 EPS8Q12929 822 aa13.83□□□□□ -0.2
CHMP4A-204ENST00000530996 IQCCQ4KMZ1 466 aa13.83□□□□□ -0.2
CHMP4A-204ENST00000530996 LIN52Q52LA3 116 aa13.83□□□□□ -0.2
CHMP4A-204ENST00000530996 FAM166AQ6J272 317 aa13.83□□□□□ -0.2
CHMP4A-204ENST00000530996 VHLLQ6RSH7 139 aa13.83□□□□□ -0.2
CHMP4A-204ENST00000530996 LRRC74BQ6ZQY2 392 aa13.83□□□□□ -0.2
CHMP4A-204ENST00000530996 ZNF621Q6ZSS3 439 aa13.83□□□□□ -0.2
CHMP4A-204ENST00000530996 SPATA19Q7Z5L4 167 aa13.83□□□□□ -0.2
CHMP4A-204ENST00000530996 ZNF440Q8IYI8 595 aa13.83□□□□□ -0.2
CHMP4A-204ENST00000530996 KIRREL3Q8IZU9 778 aa13.83□□□□□ -0.2
CHMP4A-204ENST00000530996 ARIH2OSQ8N7S6 290 aa13.83□□□□□ -0.2
CHMP4A-204ENST00000530996 TMEM99Q8N816 258 aa13.83□□□□□ -0.2
CHMP4A-204ENST00000530996 PROX1Q92786 737 aa13.83□□□□□ -0.2
CHMP4A-204ENST00000530996 TMEM45BQ96B21 275 aa13.83□□□□□ -0.2
CHMP4A-204ENST00000530996 ZBTB18Q99592 522 aa13.83□□□□□ -0.2
CHMP4A-204ENST00000530996 VRK1Q99986 396 aaPredicted RBP13.83□□□□□ -0.2
CHMP4A-204ENST00000530996 TMEM160Q9NX00 188 aa13.83□□□□□ -0.2
CHMP4A-204ENST00000530996 BTNL2Q9UIR0 455 aa13.83□□□□□ -0.2
CHMP4A-204ENST00000530996 LOC100289279A0A1B0GTE1 492 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms