RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 LIN52Q52LA3 116 aa18.39■□□□□ 0.53
SMPD1-204ENST00000530395 SLC22A25Q6T423 547 aa18.39■□□□□ 0.53
SMPD1-204ENST00000530395 PAQR6Q6TCH4 344 aa18.39■□□□□ 0.53
SMPD1-204ENST00000530395 OR52P1PQ8NH57 321 aa18.39■□□□□ 0.53
SMPD1-204ENST00000530395 REG4Q9BYZ8 158 aa18.39■□□□□ 0.53
SMPD1-204ENST00000530395 HEATR1Q9H583 2144 aaKnown RBP18.39■□□□□ 0.53
SMPD1-204ENST00000530395 RMND5AQ9H871 391 aa18.39■□□□□ 0.53
SMPD1-204ENST00000530395 NKIRAS1Q9NYS0 192 aa18.39■□□□□ 0.53
SMPD1-204ENST00000530395 FLVCR1Q9Y5Y0 555 aa18.39■□□□□ 0.53
SMPD1-204ENST00000530395 SONP18583 2426 aaKnown RBP18.39■□□□□ 0.53
SMPD1-204ENST00000530395 CDHR4A6H8M9 788 aa18.38■□□□□ 0.53
SMPD1-204ENST00000530395 TMEM247A6NEH6 219 aa18.38■□□□□ 0.53
SMPD1-204ENST00000530395 CD8AP01732 235 aa18.38■□□□□ 0.53
SMPD1-204ENST00000530395 TP53P04637 393 aaPredicted RBP18.38■□□□□ 0.53
SMPD1-204ENST00000530395 GPIP06744 558 aa18.38■□□□□ 0.53
SMPD1-204ENST00000530395 NTF4P34130 210 aa18.38■□□□□ 0.53
SMPD1-204ENST00000530395 CRATP43155 626 aa18.38■□□□□ 0.53
SMPD1-204ENST00000530395 CRISP3P54108 245 aa18.38■□□□□ 0.53
SMPD1-204ENST00000530395 SLC18A1P54219 525 aa18.38■□□□□ 0.53
SMPD1-204ENST00000530395 COPZ1P61923 177 aa18.38■□□□□ 0.53
SMPD1-204ENST00000530395 TGFBR3Q03167 851 aa18.38■□□□□ 0.53
SMPD1-204ENST00000530395 ZSWIM7Q19AV6 140 aa18.38■□□□□ 0.53
SMPD1-204ENST00000530395 C17orf78Q8N4C9 275 aa18.38■□□□□ 0.53
SMPD1-204ENST00000530395 C1orf162Q8NEQ5 155 aaPredicted RBP18.38■□□□□ 0.53
SMPD1-204ENST00000530395 OR52E4Q8NGH9 312 aa18.38■□□□□ 0.53
SMPD1-204ENST00000530395 ADAD1Q96M93 576 aaKnown RBP18.38■□□□□ 0.53
SMPD1-204ENST00000530395 MUS81Q96NY9 551 aa18.38■□□□□ 0.53
SMPD1-204ENST00000530395 ZIM2Q9NZV7 527 aa18.38■□□□□ 0.53
SMPD1-204ENST00000530395 DCTN4Q9UJW0 460 aa18.38■□□□□ 0.53
SMPD1-204ENST00000530395 CHD3Q12873 2000 aaKnown RBP18.37■□□□□ 0.53
SMPD1-204ENST00000530395 ZC3H12DA2A288 527 aaKnown RBP18.37■□□□□ 0.53
SMPD1-204ENST00000530395 M0R1B8 84 aa18.37■□□□□ 0.53
SMPD1-204ENST00000530395 THBS1P07996 1170 aa18.37■□□□□ 0.53
SMPD1-204ENST00000530395 ITGA5P08648 1049 aa18.37■□□□□ 0.53
SMPD1-204ENST00000530395 ZCCHC18P0CG32 403 aa18.37■□□□□ 0.53
SMPD1-204ENST00000530395 CD40P25942 277 aa18.37■□□□□ 0.53
SMPD1-204ENST00000530395 DSTNP60981 165 aa18.37■□□□□ 0.53
SMPD1-204ENST00000530395 SLC17A1Q14916 467 aa18.37■□□□□ 0.53
SMPD1-204ENST00000530395 LARS2Q15031 903 aaKnown RBP18.37■□□□□ 0.53
SMPD1-204ENST00000530395 OTUD3Q5T2D3 398 aaPredicted RBP18.37■□□□□ 0.53
SMPD1-204ENST00000530395 ZNF836Q6ZNA1 936 aa18.37■□□□□ 0.53
SMPD1-204ENST00000530395 MSANTD1Q6ZTZ1 278 aa18.37■□□□□ 0.53
SMPD1-204ENST00000530395 PRIMA1Q86XR5 153 aa18.37■□□□□ 0.53
SMPD1-204ENST00000530395 MAPK1IP1LQ8NDC0 245 aa18.37■□□□□ 0.53
SMPD1-204ENST00000530395 ITCHQ96J02 903 aa18.37■□□□□ 0.53
SMPD1-204ENST00000530395 MAELQ96JY0 434 aaKnown RBP18.37■□□□□ 0.53
SMPD1-204ENST00000530395 DHRS9Q9BPW9 319 aa18.37■□□□□ 0.53
SMPD1-204ENST00000530395 ADAM19Q9H013 955 aa18.37■□□□□ 0.53
SMPD1-204ENST00000530395 ARMC7Q9H6L4 198 aa18.37■□□□□ 0.53
SMPD1-204ENST00000530395 MANSC1Q9H8J5 431 aa18.37■□□□□ 0.53
SMPD1-204ENST00000530395 RLIMQ9NVW2 624 aa18.37■□□□□ 0.53
SMPD1-204ENST00000530395 THUMPD1Q9NXG2 353 aaKnown RBP18.37■□□□□ 0.53
SMPD1-204ENST00000530395 AMDHD2Q9Y303 409 aa18.37■□□□□ 0.53
SMPD1-204ENST00000530395 DSPPQ9NZW4 1301 aa18.37■□□□□ 0.53
SMPD1-204ENST00000530395 A0A1W2PR80 420 aa18.36■□□□□ 0.53
SMPD1-204ENST00000530395 PDLIM1O00151 329 aa18.36■□□□□ 0.53
SMPD1-204ENST00000530395 ABCA1O95477 2261 aa18.36■□□□□ 0.53
SMPD1-204ENST00000530395 BCHEP06276 602 aa18.36■□□□□ 0.53
SMPD1-204ENST00000530395 ETFAP13804 333 aa18.36■□□□□ 0.53
SMPD1-204ENST00000530395 TTKP33981 857 aa18.36■□□□□ 0.53
SMPD1-204ENST00000530395 CEACAM7Q14002 265 aa18.36■□□□□ 0.53
SMPD1-204ENST00000530395 OR7A5Q15622 319 aa18.36■□□□□ 0.53
SMPD1-204ENST00000530395 C1QTNF12Q5T7M4 302 aa18.36■□□□□ 0.53
SMPD1-204ENST00000530395 RNF220Q5VTB9 566 aa18.36■□□□□ 0.53
SMPD1-204ENST00000530395 C9orf135Q5VTT2 229 aa18.36■□□□□ 0.53
SMPD1-204ENST00000530395 WBP2NLQ6ICG8 309 aa18.36■□□□□ 0.53
SMPD1-204ENST00000530395 VRK2Q86Y07 508 aa18.36■□□□□ 0.53
SMPD1-204ENST00000530395 FBXL14Q8N1E6 418 aa18.36■□□□□ 0.53
SMPD1-204ENST00000530395 CADM2Q8N3J6 435 aa18.36■□□□□ 0.53
SMPD1-204ENST00000530395 TMEM45BQ96B21 275 aa18.36■□□□□ 0.53
SMPD1-204ENST00000530395 SF3B5Q9BWJ5 86 aaKnown RBP18.36■□□□□ 0.53
SMPD1-204ENST00000530395 TAPBPLQ9BX59 468 aa18.36■□□□□ 0.53
SMPD1-204ENST00000530395 AMBRA1Q9C0C7 1298 aa18.36■□□□□ 0.53
SMPD1-204ENST00000530395 TPT1P8Q9HAU6 139 aa18.36■□□□□ 0.53
SMPD1-204ENST00000530395 SLC7A10Q9NS82 523 aa18.36■□□□□ 0.53
SMPD1-204ENST00000530395 SLC6A13Q9NSD5 602 aa18.36■□□□□ 0.53
SMPD1-204ENST00000530395 CBLN4Q9NTU7 201 aa18.36■□□□□ 0.53
SMPD1-204ENST00000530395 GDF2Q9UK05 429 aaPredicted RBP18.36■□□□□ 0.53
SMPD1-204ENST00000530395 ZNF232Q9UNY5 417 aa18.36■□□□□ 0.53
SMPD1-204ENST00000530395 ZNF443Q9Y2A4 671 aaPredicted RBP18.36■□□□□ 0.53
SMPD1-204ENST00000530395 B3GALT5Q9Y2C3 310 aa18.36■□□□□ 0.53
SMPD1-204ENST00000530395 FAM234BA2RU67 622 aa18.35■□□□□ 0.53
SMPD1-204ENST00000530395 LIPT2A6NK58 231 aa18.35■□□□□ 0.53
SMPD1-204ENST00000530395 E7EQL1 145 aa18.35■□□□□ 0.53
SMPD1-204ENST00000530395 NDUFS7O75251 213 aa18.35■□□□□ 0.53
SMPD1-204ENST00000530395 GKN3PP0CG01 181 aa18.35■□□□□ 0.53
SMPD1-204ENST00000530395 NCF2P19878 526 aaPredicted RBP18.35■□□□□ 0.53
SMPD1-204ENST00000530395 MVDP53602 400 aa18.35■□□□□ 0.53
SMPD1-204ENST00000530395 FOXG1P55316 489 aaPredicted RBP18.35■□□□□ 0.53
SMPD1-204ENST00000530395 MAGOHP61326 146 aaKnown RBP18.35■□□□□ 0.53
SMPD1-204ENST00000530395 KRTAP1-1Q07627 177 aa18.35■□□□□ 0.53
SMPD1-204ENST00000530395 SPOCK1Q08629 439 aa18.35■□□□□ 0.53
SMPD1-204ENST00000530395 MAPK11Q15759 364 aa18.35■□□□□ 0.53
SMPD1-204ENST00000530395 SLC9B1Q4ZJI4 515 aa18.35■□□□□ 0.53
SMPD1-204ENST00000530395 C6orf10Q5SRN2 563 aa18.35■□□□□ 0.53
SMPD1-204ENST00000530395 TSPO2Q5TGU0 170 aa18.35■□□□□ 0.53
SMPD1-204ENST00000530395 KLHL24Q6TFL4 600 aa18.35■□□□□ 0.53
SMPD1-204ENST00000530395 DNM1P46Q6ZS02 220 aa18.35■□□□□ 0.53
SMPD1-204ENST00000530395 MUC15Q8N387 334 aa18.35■□□□□ 0.53
SMPD1-204ENST00000530395 OR9K2Q8NGE7 335 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms