RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 LIPCP11150 499 aa14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 NR0B1P51843 470 aaKnown RBP14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 UBE2NP61088 152 aaKnown RBP14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 TNFRSF17Q02223 184 aa14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 B3GLCTQ6Y288 498 aa14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 MBOAT2Q6ZWT7 520 aa14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 NANOGP1Q8N7R0 232 aa14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 OR52R1Q8NGF1 315 aa14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 OR2T27Q8NH04 317 aa14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 LRFN1Q9P244 771 aa14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 TMEM82A0PJX8 343 aa14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 RDH16O75452 317 aa14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 LALBAP00709 142 aa14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 TEKQ02763 1124 aa14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 CNN3Q15417 329 aaKnown RBP14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 ZNF674Q2M3X9 581 aa14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 ABHD12BQ7Z5M8 362 aaPredicted RBP14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 THAP3Q8WTV1 239 aaPredicted RBP14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 OBP2AQ9NY56 170 aa14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 OTX2P32243 289 aa14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 KCNJ10P78508 379 aa14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 NTHL1P78549 312 aa14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 HSF5Q4G112 596 aaPredicted RBP14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 CD163Q86VB7 1156 aa14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 OR13C2Q8NGS9 318 aa14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 CROCCQ5TZA2 2017 aa14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 SLCO2B1O94956 709 aa14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 SERPINA5P05154 406 aa14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 PRKAR1BP31321 381 aa14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 ACVR1Q04771 509 aa14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 ECH1Q13011 328 aa14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 HTR4Q13639 388 aa14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 ACTBL2Q562R1 376 aa14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 MANEAQ5SRI9 462 aa14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 COMTD1Q86VU5 262 aa14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 OR10K1Q8NGX5 313 aa14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 RRNAD1Q96FB5 475 aaKnown RBP14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 CDCA4Q9BXL8 241 aa14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 SEMA4GQ9NTN9 838 aa14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 A0A1B0GUL6 1792 aa14.37□□□□□ -0.11
PCDHA4-203ENST00000530339 LOC102725191A0A1B0GVB3 256 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 FXYD1O00168 92 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 FOLR3P41439 243 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 DMWDQ09019 674 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 NR0B2Q15466 257 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 TMEM184AQ6ZMB5 413 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 VASH1Q7L8A9 365 aaPredicted RBP14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 OR2A12Q8NGT7 310 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 GLYATL2Q8WU03 294 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 DNTTIP1Q9H147 329 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 NTN4Q9HB63 628 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 AKIP1Q9NQ31 210 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 FBXL2Q9UKC9 423 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 PRRC2BQ5JSZ5 2229 aaKnown RBP14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 ACOD1A6NK06 481 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 SMLR1H3BR10 107 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 S100A11P31949 105 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 IDH3GP51553 393 aaPredicted RBP14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 AKR1C2P52895 323 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 RPE65Q16518 533 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 C18orf63Q68DL7 685 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 LCN10Q6JVE6 187 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 USP53Q70EK8 1073 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 OR9A4Q8NGU2 314 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 TCTN2Q96GX1 697 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 OR10A5Q9H207 317 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 OR10A2Q9H208 303 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 HRH4Q9H3N8 390 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 NRAPQ86VF7 1730 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 TMEM129A0AVI4 362 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 TSPAN11A1L157 253 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 RFXAPO00287 272 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 SGCEO43556 437 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 VEGFCP49767 419 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 BEX5Q5H9J7 111 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 TAS1R1Q7RTX1 841 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 CMTM1Q8IZ96 169 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 KLHDC9Q8NEP7 349 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 MICU1Q9BPX6 476 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 GSX2Q9BZM3 304 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 MED20Q9H944 212 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 CPNE7Q9UBL6 633 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 NPFFR2Q9Y5X5 522 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 GMDSO60547 372 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 TAS2R20P59543 309 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 MZT1Q08AG7 82 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 TMEM52BQ4KMG9 183 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 EEF1A1P5Q5VTE0 462 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 BCDIN3DQ7Z5W3 292 aaKnown RBP14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 RIMKLAQ8IXN7 391 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 ZNF679Q8IYX0 411 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 OR14A16Q8NHC5 309 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 RNF128Q8TEB7 428 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 ST6GALNAC5Q9BVH7 336 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 ZNF416Q9BWM5 594 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 C1QTNF3Q9BXJ4 246 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 CXCL16Q9H2A7 254 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 LAMB1P07942 1786 aa14.36□□□□□ -0.11
PCDHA4-203ENST00000530339 FAM230AA0A1W2PPH8 454 aa14.35□□□□□ -0.11
PCDHA4-203ENST00000530339 FADS1O60427 444 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms