RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 TCAIMQ8N3R3 496 aa4.57□□□□□ -1.68
AMBRA1-209ENST00000529963 SPATA6LQ8N4H0 392 aa4.57□□□□□ -1.68
AMBRA1-209ENST00000529963 IQCF1Q8N6M8 205 aa4.57□□□□□ -1.68
AMBRA1-209ENST00000529963 SLC22A8Q8TCC7 542 aa4.57□□□□□ -1.68
AMBRA1-209ENST00000529963 ACTRT1Q8TDG2 376 aa4.57□□□□□ -1.68
AMBRA1-209ENST00000529963 PTPMT1Q8WUK0 201 aaPredicted RBP4.57□□□□□ -1.68
AMBRA1-209ENST00000529963 NRGNQ92686 78 aa4.57□□□□□ -1.68
AMBRA1-209ENST00000529963 RHBDF1Q96CC6 855 aa4.57□□□□□ -1.68
AMBRA1-209ENST00000529963 LRRC39Q96DD0 335 aa4.57□□□□□ -1.68
AMBRA1-209ENST00000529963 CFAP36Q96G28 342 aa4.57□□□□□ -1.68
AMBRA1-209ENST00000529963 RMND5BQ96G75 393 aaPredicted RBP4.57□□□□□ -1.68
AMBRA1-209ENST00000529963 RUNDC3BQ96NL0 473 aa4.57□□□□□ -1.68
AMBRA1-209ENST00000529963 QRFPRQ96P65 431 aa4.57□□□□□ -1.68
AMBRA1-209ENST00000529963 CITED2Q99967 270 aaPredicted RBP4.57□□□□□ -1.68
AMBRA1-209ENST00000529963 FAM110AQ9BQ89 295 aa4.57□□□□□ -1.68
AMBRA1-209ENST00000529963 GPATCH1Q9BRR8 931 aaKnown RBP4.57□□□□□ -1.68
AMBRA1-209ENST00000529963 EFCAB11Q9BUY7 163 aa4.57□□□□□ -1.68
AMBRA1-209ENST00000529963 CXXC4Q9H2H0 198 aa4.57□□□□□ -1.68
AMBRA1-209ENST00000529963 EHD1Q9H4M9 534 aa4.57□□□□□ -1.68
AMBRA1-209ENST00000529963 OPA3Q9H6K4 179 aa4.57□□□□□ -1.68
AMBRA1-209ENST00000529963 CNOT10Q9H9A5 744 aaKnown RBP4.57□□□□□ -1.68
AMBRA1-209ENST00000529963 LIN28AQ9H9Z2 209 aaKnown RBP4.57□□□□□ -1.68
AMBRA1-209ENST00000529963 LYRM4Q9HD34 91 aa4.57□□□□□ -1.68
AMBRA1-209ENST00000529963 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.57□□□□□ -1.68
AMBRA1-209ENST00000529963 WWOXQ9NZC7 414 aa4.57□□□□□ -1.68
AMBRA1-209ENST00000529963 IKZF3Q9UKT9 509 aa4.57□□□□□ -1.68
AMBRA1-209ENST00000529963 BOKQ9UMX3 212 aaPredicted RBP4.57□□□□□ -1.68
AMBRA1-209ENST00000529963 CHMP2BQ9UQN3 213 aa4.57□□□□□ -1.68
AMBRA1-209ENST00000529963 FAM215AQ9Y5M1 114 aa4.57□□□□□ -1.68
AMBRA1-209ENST00000529963 PRRC2AP48634 2157 aaKnown RBP4.57□□□□□ -1.68
AMBRA1-209ENST00000529963 HCFC1P51610 2035 aa4.57□□□□□ -1.68
AMBRA1-209ENST00000529963 NCF1BA6NI72 391 aaPredicted RBP4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 NCF1CA8MVU1 366 aaPredicted RBP4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 STK16O75716 305 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 SLU7O95391 586 aaKnown RBP4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 CCL3P10147 92 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 NCF1P14598 390 aaPredicted RBP4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 STX2P32856 288 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 ELK3P41970 407 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 DNASE1L1P49184 302 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 NR0B1P51843 470 aaKnown RBP4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 DLX5P56178 289 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 TAS2R39P59534 338 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 ASPHQ12797 758 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 BIKQ13323 160 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 MORF4L2Q15014 288 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 TSNQ15631 228 aaKnown RBP4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 CEBPEQ15744 281 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 PDK4Q16654 411 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 PIGGQ5H8A4 983 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 PAGE2BQ5JRK9 111 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 CST9LP1Q5W188 147 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 STEAP4Q687X5 459 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 RTL6Q6ICC9 239 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 WDR73Q6P4I2 378 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 PET117Q6UWS5 81 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 CCDC91Q7Z6B0 441 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 EPHX4Q8IUS5 362 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 DND1Q8IYX4 353 aaKnown RBP4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 FBXW8Q8N3Y1 598 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 LIX1Q8N485 282 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 ZNF321PQ8N8H1 164 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 SNX31Q8N9S9 440 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 NUBPLQ8TB37 319 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 FAM222BQ8WU58 562 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 UBE2E3Q969T4 207 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 ART5Q96L15 291 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 TMEM204Q9BSN7 226 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 TBCDQ9BTW9 1192 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 POPDC3Q9HBV1 291 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 DNAJC11Q9NVH1 559 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 QPCTLQ9NXS2 382 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 MTRF1LQ9UGC7 380 aaKnown RBP4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 OSGIN1Q9UJX0 560 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 PLEKHA6Q9Y2H5 1048 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 PPP2R2CQ9Y2T4 447 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 ATG4BQ9Y4P1 393 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 ZNF469Q96JG9 3925 aaPredicted RBP4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 FLNAP21333 2647 aaKnown RBP4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 TRIM64A6NGJ6 449 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 TRIM64BA6NI03 449 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 LDB3O75112 727 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 HIST1H1TP22492 207 aaPredicted RBP4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 CPN2P22792 545 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 SERPINB1P30740 379 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 SSR2P43308 183 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 ASCL1P50553 236 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 KCNJ2P63252 427 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 IRF8Q02556 426 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 DOC2AQ14183 400 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 SF3B4Q15427 424 aaKnown RBP eCLIP4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 TGFBIQ15582 683 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 C18orf21Q32NC0 220 aaPredicted RBP4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 ZNF791Q3KP31 576 aaPredicted RBP4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 CDONQ4KMG0 1287 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 ZNF585BQ52M93 769 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 TMEM35AQ53FP2 167 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 IGSF11Q5DX21 431 aa4.56□□□□□ -1.68
AMBRA1-209ENST00000529963 CDKL4Q5MAI5 379 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms