RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 ZNF43P17038 809 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 KITLGP21583 273 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 VDAC1P21796 283 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 CALCRP30988 508 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 IL2RGP31785 369 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 HNRNPH3P31942 346 aaKnown RBP2.48□□□□□ -2.01
BRCA2-203ENST00000528762 DDOSTP39656 456 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 LEPP41159 167 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 PKNOX1P55347 436 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 SLC8A3P57103 927 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 CXCL6P80162 114 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 SPAG1Q07617 926 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 PPP1R7Q15435 360 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 PRR4Q16378 134 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 DUSP7Q16829 419 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 MICBQ29980 383 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 QRICH1Q2TAL8 776 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 ALKBH6Q3KRA9 238 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 EIPR1Q53HC9 387 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 CARD16Q5EG05 197 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 GPRC6AQ5T6X5 926 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 ZNF658Q5TYW1 1059 aaPredicted RBP2.48□□□□□ -2.01
BRCA2-203ENST00000528762 MARC1Q5VT66 337 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 CARD17Q5XLA6 110 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 RNASEKQ6P5S7 137 aaKnown RBP2.48□□□□□ -2.01
BRCA2-203ENST00000528762 TMEM220Q6QAJ8 160 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 CLEC2AQ6UVW9 174 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 TMEM107Q6UX40 140 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 HSDL2Q6YN16 418 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 Q6ZSR3 168 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 SLC25A48Q6ZT89 311 aaKnown RBP2.48□□□□□ -2.01
BRCA2-203ENST00000528762 GDPD3Q7L5L3 318 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 C17orf82Q86X59 251 aaPredicted RBP2.48□□□□□ -2.01
BRCA2-203ENST00000528762 PSTKQ8IV42 348 aaKnown RBP2.48□□□□□ -2.01
BRCA2-203ENST00000528762 OFCC1Q8IZS5 231 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.48□□□□□ -2.01
BRCA2-203ENST00000528762 CEP112Q8N8E3 955 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 ZNF485Q8NCK3 441 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 MAPK1IP1LQ8NDC0 245 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 OR1L6Q8NGR2 347 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 OR56B4Q8NH76 319 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 RHOXF1Q8NHV9 184 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 SETD7Q8WTS6 366 aaKnown RBP2.48□□□□□ -2.01
BRCA2-203ENST00000528762 HAVCR1Q96D42 359 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 PANX1Q96RD7 426 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 RANBP9Q96S59 729 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 CNN2Q99439 309 aaKnown RBP2.48□□□□□ -2.01
BRCA2-203ENST00000528762 RNF2Q99496 336 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 FMO2Q99518 471 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 MTG1Q9BT17 334 aaPredicted RBP2.48□□□□□ -2.01
BRCA2-203ENST00000528762 PPA2Q9H2U2 334 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 NIPAL2Q9H841 368 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 NMRAL1Q9HBL8 299 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 NEK6Q9HC98 313 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 NT5MQ9NPB1 228 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 THUMPD1Q9NXG2 353 aaKnown RBP2.48□□□□□ -2.01
BRCA2-203ENST00000528762 KLHL28Q9NXS3 571 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 IKZF2Q9UKS7 526 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 KIAA1257Q9ULG3 409 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 TMCO1Q9UM00 188 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 ABCG2Q9UNQ0 655 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 CHTOPQ9Y3Y2 248 aaKnown RBP2.48□□□□□ -2.01
BRCA2-203ENST00000528762 N6AMT1Q9Y5N5 214 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 SNED1Q8TER0 1413 aa2.48□□□□□ -2.01
BRCA2-203ENST00000528762 IGHV3-35A0A0C4DH35 117 aa2.47□□□□□ -2.01
BRCA2-203ENST00000528762 NCF1BA6NI72 391 aaPredicted RBP2.47□□□□□ -2.01
BRCA2-203ENST00000528762 LRRIQ4A6NIV6 560 aa2.47□□□□□ -2.01
BRCA2-203ENST00000528762 NCF1CA8MVU1 366 aaPredicted RBP2.47□□□□□ -2.01
BRCA2-203ENST00000528762 GFYI3L273 518 aa2.47□□□□□ -2.01
BRCA2-203ENST00000528762 HIP1O00291 1037 aa2.47□□□□□ -2.01
BRCA2-203ENST00000528762 WWP2O00308 870 aa2.47□□□□□ -2.01
BRCA2-203ENST00000528762 RNF13O43567 381 aa2.47□□□□□ -2.01
BRCA2-203ENST00000528762 UGT1A9O60656 530 aa2.47□□□□□ -2.01
BRCA2-203ENST00000528762 SLITRK3O94933 977 aa2.47□□□□□ -2.01
BRCA2-203ENST00000528762 OXSR1O95747 527 aaPredicted RBP2.47□□□□□ -2.01
BRCA2-203ENST00000528762 TMEM50AO95807 157 aa2.47□□□□□ -2.01
BRCA2-203ENST00000528762 LGI1O95970 557 aa2.47□□□□□ -2.01
BRCA2-203ENST00000528762 OR8U8P0C7N1 319 aa2.47□□□□□ -2.01
BRCA2-203ENST00000528762 OR8G3PP0DMU2 310 aa2.47□□□□□ -2.01
BRCA2-203ENST00000528762 TNNI1P19237 187 aa2.47□□□□□ -2.01
BRCA2-203ENST00000528762 UGT1A3P35503 534 aa2.47□□□□□ -2.01
BRCA2-203ENST00000528762 OR1G1P47890 313 aa2.47□□□□□ -2.01
BRCA2-203ENST00000528762 BCL2L1Q07817 233 aa2.47□□□□□ -2.01
BRCA2-203ENST00000528762 ASPHQ12797 758 aa2.47□□□□□ -2.01
BRCA2-203ENST00000528762 MAB21L1Q13394 359 aa2.47□□□□□ -2.01
BRCA2-203ENST00000528762 ARL6IP1Q15041 203 aa2.47□□□□□ -2.01
BRCA2-203ENST00000528762 AANATQ16613 207 aa2.47□□□□□ -2.01
BRCA2-203ENST00000528762 Q1RN00 199 aa2.47□□□□□ -2.01
BRCA2-203ENST00000528762 LRRC36Q1X8D7 754 aa2.47□□□□□ -2.01
BRCA2-203ENST00000528762 GSG1Q2KHT4 349 aa2.47□□□□□ -2.01
BRCA2-203ENST00000528762 OR2B11Q5JQS5 317 aa2.47□□□□□ -2.01
BRCA2-203ENST00000528762 PAGE2BQ5JRK9 111 aa2.47□□□□□ -2.01
BRCA2-203ENST00000528762 SPANXN2Q5MJ10 180 aa2.47□□□□□ -2.01
BRCA2-203ENST00000528762 ATAD3CQ5T2N8 411 aa2.47□□□□□ -2.01
BRCA2-203ENST00000528762 OR2G6Q5TZ20 316 aa2.47□□□□□ -2.01
BRCA2-203ENST00000528762 LRRC31Q6UY01 552 aa2.47□□□□□ -2.01
BRCA2-203ENST00000528762 CCDC73Q6ZRK6 1079 aa2.47□□□□□ -2.01
BRCA2-203ENST00000528762 HPS6Q86YV9 775 aa2.47□□□□□ -2.01
BRCA2-203ENST00000528762 CCDC148Q8NFR7 591 aa2.47□□□□□ -2.01
BRCA2-203ENST00000528762 ZPLD1Q8TCW7 415 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms