RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 ARMC7Q9H6L4 198 aa12.55□□□□□ -0.4
CAPN1-212ENST00000527887 SDR39U1Q9NRG7 319 aaPredicted RBP12.55□□□□□ -0.4
CAPN1-212ENST00000527887 PRSS50Q9UI38 385 aa12.55□□□□□ -0.4
CAPN1-212ENST00000527887 LAMP3Q9UQV4 416 aa12.55□□□□□ -0.4
CAPN1-212ENST00000527887 TMED7-TICAM2A0A0A6YYA0 188 aa12.54□□□□□ -0.4
CAPN1-212ENST00000527887 OR5H1A6NKK0 313 aa12.54□□□□□ -0.4
CAPN1-212ENST00000527887 CLDN24A6NM45 220 aa12.54□□□□□ -0.4
CAPN1-212ENST00000527887 C9JVG2 144 aa12.54□□□□□ -0.4
CAPN1-212ENST00000527887 CLOCKO15516 846 aa12.54□□□□□ -0.4
CAPN1-212ENST00000527887 BCAS1O75363 584 aaPredicted RBP12.54□□□□□ -0.4
CAPN1-212ENST00000527887 MRPL33O75394 65 aaKnown RBP12.54□□□□□ -0.4
CAPN1-212ENST00000527887 LYZL6O75951 148 aa12.54□□□□□ -0.4
CAPN1-212ENST00000527887 UBOX5O94941 541 aa12.54□□□□□ -0.4
CAPN1-212ENST00000527887 ANP32DO95626 131 aa12.54□□□□□ -0.4
CAPN1-212ENST00000527887 IGHV1-2P23083 117 aa12.54□□□□□ -0.4
CAPN1-212ENST00000527887 CDKN2CP42773 168 aa12.54□□□□□ -0.4
CAPN1-212ENST00000527887 CRISP3P54108 245 aa12.54□□□□□ -0.4
CAPN1-212ENST00000527887 ATP5J2P56134 94 aa12.54□□□□□ -0.4
CAPN1-212ENST00000527887 OR2B6P58173 313 aa12.54□□□□□ -0.4
CAPN1-212ENST00000527887 PLAURQ03405 335 aa12.54□□□□□ -0.4
CAPN1-212ENST00000527887 EPS8Q12929 822 aa12.54□□□□□ -0.4
CAPN1-212ENST00000527887 LIN52Q52LA3 116 aa12.54□□□□□ -0.4
CAPN1-212ENST00000527887 OR7E24Q6IFN5 339 aa12.54□□□□□ -0.4
CAPN1-212ENST00000527887 ALKBH2Q6NS38 261 aa12.54□□□□□ -0.4
CAPN1-212ENST00000527887 ZNF433Q8N7K0 673 aaPredicted RBP12.54□□□□□ -0.4
CAPN1-212ENST00000527887 LILRB1Q8NHL6 650 aaPredicted RBP12.54□□□□□ -0.4
CAPN1-212ENST00000527887 SMAP2Q8WU79 429 aaPredicted RBP12.54□□□□□ -0.4
CAPN1-212ENST00000527887 ZNF775Q96BV0 537 aaPredicted RBP12.54□□□□□ -0.4
CAPN1-212ENST00000527887 CMTM5Q96DZ9 223 aa12.54□□□□□ -0.4
CAPN1-212ENST00000527887 ITCHQ96J02 903 aa12.54□□□□□ -0.4
CAPN1-212ENST00000527887 OR52B2Q96RD2 323 aa12.54□□□□□ -0.4
CAPN1-212ENST00000527887 ADAM19Q9H013 955 aa12.54□□□□□ -0.4
CAPN1-212ENST00000527887 ZNF385DQ9H6B1 395 aa12.54□□□□□ -0.4
CAPN1-212ENST00000527887 CACYBPQ9HB71 228 aaKnown RBP12.54□□□□□ -0.4
CAPN1-212ENST00000527887 FAIMQ9NVQ4 179 aa12.54□□□□□ -0.4
CAPN1-212ENST00000527887 ASB6Q9NWX5 421 aa12.54□□□□□ -0.4
CAPN1-212ENST00000527887 TAS2R16Q9NYV7 291 aa12.54□□□□□ -0.4
CAPN1-212ENST00000527887 MALT1Q9UDY8 824 aa12.54□□□□□ -0.4
CAPN1-212ENST00000527887 OSGIN1Q9UJX0 560 aa12.54□□□□□ -0.4
CAPN1-212ENST00000527887 ZNF232Q9UNY5 417 aa12.54□□□□□ -0.4
CAPN1-212ENST00000527887 MGAT4BQ9UQ53 548 aa12.54□□□□□ -0.4
CAPN1-212ENST00000527887 TMED7Q9Y3B3 224 aa12.54□□□□□ -0.4
CAPN1-212ENST00000527887 CIB4A0PJX0 185 aa12.53□□□□□ -0.4
CAPN1-212ENST00000527887 CDHR4A6H8M9 788 aa12.53□□□□□ -0.4
CAPN1-212ENST00000527887 TMEM247A6NEH6 219 aa12.53□□□□□ -0.4
CAPN1-212ENST00000527887 DPRXA6NFQ7 191 aa12.53□□□□□ -0.4
CAPN1-212ENST00000527887 UBDO15205 165 aa12.53□□□□□ -0.4
CAPN1-212ENST00000527887 GSNP06396 782 aa12.53□□□□□ -0.4
CAPN1-212ENST00000527887 THBS1P07996 1170 aa12.53□□□□□ -0.4
CAPN1-212ENST00000527887 DANCRP0C864 163 aa12.53□□□□□ -0.4
CAPN1-212ENST00000527887 CALB2P22676 271 aa12.53□□□□□ -0.4
CAPN1-212ENST00000527887 TACR3P29371 465 aa12.53□□□□□ -0.4
CAPN1-212ENST00000527887 BSPH1Q075Z2 132 aa12.53□□□□□ -0.4
CAPN1-212ENST00000527887 SF3A3Q12874 501 aaKnown RBP eCLIP12.53□□□□□ -0.4
CAPN1-212ENST00000527887 STK11Q15831 433 aa12.53□□□□□ -0.4
CAPN1-212ENST00000527887 COX20Q5RI15 118 aa12.53□□□□□ -0.4
CAPN1-212ENST00000527887 MRPL2Q5T653 305 aaKnown RBP12.53□□□□□ -0.4
CAPN1-212ENST00000527887 PAQR6Q6TCH4 344 aa12.53□□□□□ -0.4
CAPN1-212ENST00000527887 SEZ6L2Q6UXD5 910 aa12.53□□□□□ -0.4
CAPN1-212ENST00000527887 UBE2J2Q8N2K1 259 aa12.53□□□□□ -0.4
CAPN1-212ENST00000527887 NSL1Q96IY1 281 aa12.53□□□□□ -0.4
CAPN1-212ENST00000527887 TRIM2Q9C040 744 aa12.53□□□□□ -0.4
CAPN1-212ENST00000527887 TPT1P8Q9HAU6 139 aa12.53□□□□□ -0.4
CAPN1-212ENST00000527887 SLC9A8Q9Y2E8 581 aa12.53□□□□□ -0.4
CAPN1-212ENST00000527887 IFT52Q9Y366 437 aa12.53□□□□□ -0.4
CAPN1-212ENST00000527887 DSPPQ9NZW4 1301 aa12.53□□□□□ -0.4
CAPN1-212ENST00000527887 ZANQ9Y493 2812 aa12.52□□□□□ -0.4
CAPN1-212ENST00000527887 A0A0G2JPF8 293 aa12.52□□□□□ -0.41
CAPN1-212ENST00000527887 A0A1W2PP18 115 aa12.52□□□□□ -0.41
CAPN1-212ENST00000527887 HNRNPCL2B2RXH8 293 aa12.52□□□□□ -0.41
CAPN1-212ENST00000527887 HNRNPCL3B7ZW38 293 aa12.52□□□□□ -0.41
CAPN1-212ENST00000527887 AP3D1O14617 1153 aa12.52□□□□□ -0.41
CAPN1-212ENST00000527887 ADAM11O75078 769 aa12.52□□□□□ -0.41
CAPN1-212ENST00000527887 LY6G6DO95868 133 aa12.52□□□□□ -0.41
CAPN1-212ENST00000527887 TFPTP0C1Z6 253 aa12.52□□□□□ -0.41
CAPN1-212ENST00000527887 HNRNPCL4P0DMR1 293 aa12.52□□□□□ -0.41
CAPN1-212ENST00000527887 T-ENOLP0DO92 83 aa12.52□□□□□ -0.41
CAPN1-212ENST00000527887 NCF2P19878 526 aaPredicted RBP12.52□□□□□ -0.41
CAPN1-212ENST00000527887 CXCR1P25024 350 aa12.52□□□□□ -0.41
CAPN1-212ENST00000527887 PTAFRP25105 342 aa12.52□□□□□ -0.41
CAPN1-212ENST00000527887 IDUAP35475 653 aa12.52□□□□□ -0.41
CAPN1-212ENST00000527887 CRATP43155 626 aa12.52□□□□□ -0.41
CAPN1-212ENST00000527887 POLR2JP52435 117 aaKnown RBP12.52□□□□□ -0.41
CAPN1-212ENST00000527887 MVDP53602 400 aa12.52□□□□□ -0.41
CAPN1-212ENST00000527887 COPZ1P61923 177 aa12.52□□□□□ -0.41
CAPN1-212ENST00000527887 TGFBR3Q03167 851 aa12.52□□□□□ -0.41
CAPN1-212ENST00000527887 SLC17A1Q14916 467 aa12.52□□□□□ -0.41
CAPN1-212ENST00000527887 LARS2Q15031 903 aaKnown RBP12.52□□□□□ -0.41
CAPN1-212ENST00000527887 RNF220Q5VTB9 566 aa12.52□□□□□ -0.41
CAPN1-212ENST00000527887 PRAMEF8Q5VWM4 474 aa12.52□□□□□ -0.41
CAPN1-212ENST00000527887 PRAMEF7Q5VXH5 474 aa12.52□□□□□ -0.41
CAPN1-212ENST00000527887 KLHL17Q6TDP4 642 aa12.52□□□□□ -0.41
CAPN1-212ENST00000527887 TMEM108Q6UXF1 575 aa12.52□□□□□ -0.41
CAPN1-212ENST00000527887 MIER2Q8N344 545 aa12.52□□□□□ -0.41
CAPN1-212ENST00000527887 CIARTQ8N365 385 aaPredicted RBP12.52□□□□□ -0.41
CAPN1-212ENST00000527887 OR52P1PQ8NH57 321 aa12.52□□□□□ -0.41
CAPN1-212ENST00000527887 PNPT1Q8TCS8 783 aaKnown RBP12.52□□□□□ -0.41
CAPN1-212ENST00000527887 TSPEARQ8WU66 669 aa12.52□□□□□ -0.41
CAPN1-212ENST00000527887 SLC35B4Q969S0 331 aa12.52□□□□□ -0.41
CAPN1-212ENST00000527887 MUS81Q96NY9 551 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms