RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 ELOA3BQ3SY89 546 aa14.05□□□□□ -0.16
USH1C-207ENST00000527720 CCDC58Q4VC31 144 aa14.05□□□□□ -0.16
USH1C-207ENST00000527720 SSX6Q7RTT6 188 aa14.05□□□□□ -0.16
USH1C-207ENST00000527720 NUP54Q7Z3B4 507 aa14.05□□□□□ -0.16
USH1C-207ENST00000527720 SLC35F2Q8IXU6 374 aa14.05□□□□□ -0.16
USH1C-207ENST00000527720 LRRC17Q8N6Y2 441 aa14.05□□□□□ -0.16
USH1C-207ENST00000527720 NPEPL1Q8NDH3 523 aa14.05□□□□□ -0.16
USH1C-207ENST00000527720 ELOA3Q8NG57 546 aa14.05□□□□□ -0.16
USH1C-207ENST00000527720 OR5J2Q8NH18 312 aa14.05□□□□□ -0.16
USH1C-207ENST00000527720 TP53INP1Q96A56 240 aa14.05□□□□□ -0.16
USH1C-207ENST00000527720 SMIM19Q96E16 107 aa14.05□□□□□ -0.16
USH1C-207ENST00000527720 ZMYND19Q96E35 227 aaPredicted RBP14.05□□□□□ -0.16
USH1C-207ENST00000527720 MFRPQ9BY79 579 aa14.05□□□□□ -0.16
USH1C-207ENST00000527720 NMNAT2Q9BZQ4 307 aa14.05□□□□□ -0.16
USH1C-207ENST00000527720 MMP28Q9H239 520 aa14.05□□□□□ -0.16
USH1C-207ENST00000527720 PPIL3Q9H2H8 161 aaKnown RBP14.05□□□□□ -0.16
USH1C-207ENST00000527720 CUTCQ9NTM9 273 aa14.05□□□□□ -0.16
USH1C-207ENST00000527720 POU2F3Q9UKI9 436 aa14.05□□□□□ -0.16
USH1C-207ENST00000527720 SLC6A5Q9Y345 797 aa14.05□□□□□ -0.16
USH1C-207ENST00000527720 NPFFR2Q9Y5X5 522 aa14.05□□□□□ -0.16
USH1C-207ENST00000527720 EML5Q05BV3 1969 aa14.05□□□□□ -0.16
USH1C-207ENST00000527720 H3BMH7 237 aa14.04□□□□□ -0.16
USH1C-207ENST00000527720 SCDO00767 359 aa14.04□□□□□ -0.16
USH1C-207ENST00000527720 APEHP13798 732 aaKnown RBP14.04□□□□□ -0.16
USH1C-207ENST00000527720 RBMS1P29558 406 aaKnown RBP14.04□□□□□ -0.16
USH1C-207ENST00000527720 TALDO1P37837 337 aa14.04□□□□□ -0.16
USH1C-207ENST00000527720 GRK6P43250 576 aa14.04□□□□□ -0.16
USH1C-207ENST00000527720 SKP2Q13309 424 aa14.04□□□□□ -0.16
USH1C-207ENST00000527720 ACSM3Q53FZ2 586 aa14.04□□□□□ -0.16
USH1C-207ENST00000527720 TRILQ7L0X0 811 aa14.04□□□□□ -0.16
USH1C-207ENST00000527720 ATG4DQ86TL0 474 aaPredicted RBP14.04□□□□□ -0.16
USH1C-207ENST00000527720 GHSRQ92847 366 aa14.04□□□□□ -0.16
USH1C-207ENST00000527720 NEK6Q9HC98 313 aa14.04□□□□□ -0.16
USH1C-207ENST00000527720 B3GAT2Q9NPZ5 323 aa14.04□□□□□ -0.16
USH1C-207ENST00000527720 EXTL2Q9UBQ6 330 aa14.04□□□□□ -0.16
USH1C-207ENST00000527720 MRPS17Q9Y2R5 130 aaKnown RBP14.04□□□□□ -0.16
USH1C-207ENST00000527720 IGKV1D-42A0A075B6H8 117 aa14.04□□□□□ -0.16
USH1C-207ENST00000527720 FRG2CA6NGY1 282 aa14.04□□□□□ -0.16
USH1C-207ENST00000527720 RHPN2P1A8MT19 583 aa14.04□□□□□ -0.16
USH1C-207ENST00000527720 TFECO14948 347 aaPredicted RBP14.04□□□□□ -0.16
USH1C-207ENST00000527720 ACVR1BP36896 505 aa14.04□□□□□ -0.16
USH1C-207ENST00000527720 NXPH1P58417 271 aa14.04□□□□□ -0.16
USH1C-207ENST00000527720 CDK5R1Q15078 307 aa14.04□□□□□ -0.16
USH1C-207ENST00000527720 DEFB133Q30KQ1 61 aa14.04□□□□□ -0.16
USH1C-207ENST00000527720 ATAD3CQ5T2N8 411 aa14.04□□□□□ -0.16
USH1C-207ENST00000527720 RPL22L1Q6P5R6 122 aaKnown RBP14.04□□□□□ -0.16
USH1C-207ENST00000527720 PLET1Q6UQ28 207 aa14.04□□□□□ -0.16
USH1C-207ENST00000527720 DEFB119Q8N690 84 aa14.04□□□□□ -0.16
USH1C-207ENST00000527720 C12orf10Q9HB07 376 aa14.04□□□□□ -0.16
USH1C-207ENST00000527720 MALT1Q9UDY8 824 aa14.04□□□□□ -0.16
USH1C-207ENST00000527720 HIF3AQ9Y2N7 669 aa14.04□□□□□ -0.16
USH1C-207ENST00000527720 ADAM18Q9Y3Q7 739 aa14.04□□□□□ -0.16
USH1C-207ENST00000527720 IGKV3D-11A0A0A0MRZ8 115 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 A0A0G2JK05 382 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 ZNF264O43296 627 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 LYRM1O43325 122 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 GATBO75879 557 aaKnown RBP14.03□□□□□ -0.16
USH1C-207ENST00000527720 OR2B3O76000 313 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 NPR2P20594 1047 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 IGFBP4P22692 258 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 INPP1P49441 399 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 DCAF7P61962 342 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 SIRPAP78324 504 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 RPTNQ6XPR3 784 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 TMEM151BQ8IW70 566 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 PHYHIPQ92561 330 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 PELI1Q96FA3 418 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 ZNF486Q96H40 463 aaPredicted RBP14.03□□□□□ -0.16
USH1C-207ENST00000527720 LCORQ96JN0 433 aaPredicted RBP14.03□□□□□ -0.16
USH1C-207ENST00000527720 LRRN3E7EW58 273 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 IMPA2O14732 288 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 HYAL3O43820 417 aaPredicted RBP14.03□□□□□ -0.16
USH1C-207ENST00000527720 ARL6IP5O75915 188 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 SPI1P17947 270 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 RAB3BP20337 219 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 MAOBP27338 520 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 HLA-DMAP28067 261 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 HSD11B2P80365 405 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 DBPQ10586 325 aaPredicted RBP14.03□□□□□ -0.16
USH1C-207ENST00000527720 CD226Q15762 336 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 ZNF74Q16587 644 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 TP53I3Q53FA7 332 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 PHOSPHO1Q8TCT1 267 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 SNX33Q8WV41 574 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 ST6GAL2Q96JF0 529 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 NMNAT3Q96T66 252 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 OR2B2Q9GZK3 357 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 LRRN3Q9H3W5 708 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 ZCCHC4Q9H5U6 513 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 MARCH7Q9H992 704 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 PNO1Q9NRX1 252 aaKnown RBP14.03□□□□□ -0.16
USH1C-207ENST00000527720 CA14Q9ULX7 337 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 RASD1Q9Y272 281 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 MAU2Q9Y6X3 613 aa14.03□□□□□ -0.16
USH1C-207ENST00000527720 ANKRD61A6NGH8 418 aa14.02□□□□□ -0.16
USH1C-207ENST00000527720 GLCEO94923 617 aa14.02□□□□□ -0.16
USH1C-207ENST00000527720 UTS2O95399 124 aa14.02□□□□□ -0.16
USH1C-207ENST00000527720 IGKV3-11P04433 115 aa14.02□□□□□ -0.16
USH1C-207ENST00000527720 SLC6A8P48029 635 aa14.02□□□□□ -0.16
USH1C-207ENST00000527720 GDI2P50395 445 aaKnown RBP14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms