RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 GGT5P36269 586 aa6.79□□□□□ -1.32
CTNND1-216ENST00000527467 TNFSF9P41273 254 aa6.79□□□□□ -1.32
CTNND1-216ENST00000527467 RPL29P47914 159 aaKnown RBP6.79□□□□□ -1.32
CTNND1-216ENST00000527467 STK19P49842 368 aaPredicted RBP6.79□□□□□ -1.32
CTNND1-216ENST00000527467 MAP2K6P52564 334 aa6.79□□□□□ -1.32
CTNND1-216ENST00000527467 FOXC1Q12948 553 aa6.79□□□□□ -1.32
CTNND1-216ENST00000527467 ZNF154Q13106 437 aa6.79□□□□□ -1.32
CTNND1-216ENST00000527467 GRB7Q14451 532 aa6.79□□□□□ -1.32
CTNND1-216ENST00000527467 ETFDHQ16134 617 aa6.79□□□□□ -1.32
CTNND1-216ENST00000527467 TOR2AQ5JU69 321 aa6.79□□□□□ -1.32
CTNND1-216ENST00000527467 SDHAF4Q5VUM1 108 aa6.79□□□□□ -1.32
CTNND1-216ENST00000527467 AADACL3Q5VUY0 350 aa6.79□□□□□ -1.32
CTNND1-216ENST00000527467 ZNF776Q68DI1 518 aaPredicted RBP6.79□□□□□ -1.32
CTNND1-216ENST00000527467 PLBD1Q6P4A8 553 aa6.79□□□□□ -1.32
CTNND1-216ENST00000527467 WDR73Q6P4I2 378 aa6.79□□□□□ -1.32
CTNND1-216ENST00000527467 LEG1Q6P5S2 330 aa6.79□□□□□ -1.32
CTNND1-216ENST00000527467 TMIGD1Q6UXZ0 262 aa6.79□□□□□ -1.32
CTNND1-216ENST00000527467 SLC39A11Q8N1S5 342 aa6.79□□□□□ -1.32
CTNND1-216ENST00000527467 OR13D1Q8NGV5 346 aa6.79□□□□□ -1.32
CTNND1-216ENST00000527467 OR5W2Q8NH69 310 aa6.79□□□□□ -1.32
CTNND1-216ENST00000527467 TMEM239Q8WW34 195 aa6.79□□□□□ -1.32
CTNND1-216ENST00000527467 GAB3Q8WWW8 586 aa6.79□□□□□ -1.32
CTNND1-216ENST00000527467 PKMYT1Q99640 499 aa6.79□□□□□ -1.32
CTNND1-216ENST00000527467 IL37Q9NZH6 218 aa6.79□□□□□ -1.32
CTNND1-216ENST00000527467 MYEF2Q9P2K5 600 aaKnown RBP6.79□□□□□ -1.32
CTNND1-216ENST00000527467 TAC3Q9UHF0 121 aa6.79□□□□□ -1.32
CTNND1-216ENST00000527467 YIPF1Q9Y548 306 aa6.79□□□□□ -1.32
CTNND1-216ENST00000527467 INSL5Q9Y5Q6 135 aa6.79□□□□□ -1.32
CTNND1-216ENST00000527467 IGKV6D-41A0A0C4DH26 115 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 ANTXRLA6NF34 631 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 M0QZK8 103 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 MSI1O43347 362 aaKnown RBP6.78□□□□□ -1.32
CTNND1-216ENST00000527467 DLX3O60479 287 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 TBX19O60806 448 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 GGCTO75223 188 aaKnown RBP6.78□□□□□ -1.32
CTNND1-216ENST00000527467 OR2J3O76001 311 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 AREGP15514 252 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 AADACP22760 399 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 SEC13P55735 322 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 MPEG1Q2M385 716 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 BLOC1S3Q6QNY0 202 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 GOLGA7Q7Z5G4 137 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 SLC35F2Q8IXU6 374 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 HAS1Q92839 578 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 TSGA13Q96PP4 275 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 SMOQ99835 787 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 DHRS9Q9BPW9 319 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 ALG8Q9BVK2 526 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 LIN7BQ9HAP6 207 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 OBP2AQ9NY56 170 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 SIRPGQ9P1W8 387 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 RCE1Q9Y256 329 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 MYADML2A6NDP7 307 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 TMEM233B4DJY2 109 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 CLDN5O00501 218 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 SOCS6O14544 535 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 ZNF623O75123 536 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 AK1P00568 194 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 H2AFB1P0C5Y9 115 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 APEHP13798 732 aaKnown RBP6.78□□□□□ -1.32
CTNND1-216ENST00000527467 PSMB1P20618 241 aaKnown RBP6.78□□□□□ -1.32
CTNND1-216ENST00000527467 CRHBPP24387 322 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 IDUAP35475 653 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 SLC6A12P48065 614 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 KIAA1024LP59773 190 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 RPS13P62277 151 aaKnown RBP6.78□□□□□ -1.32
CTNND1-216ENST00000527467 SIM1P81133 766 aaPredicted RBP6.78□□□□□ -1.32
CTNND1-216ENST00000527467 MOGAT2Q3SYC2 334 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 SLC6A19Q695T7 634 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 LINGO4Q6UY18 593 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 ETV3LQ6ZN32 361 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 LRRC55Q6ZSA7 311 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 OR4K14Q8NGD5 310 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 OR4A16Q8NH70 328 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 EXTL1Q92935 676 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 EGLN3Q9H6Z9 239 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 NMNAT1Q9HAN9 279 aaPredicted RBP6.78□□□□□ -1.32
CTNND1-216ENST00000527467 V9GY05 133 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 ARFGEF1Q9Y6D6 1849 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 GALR2O43603 387 aaPredicted RBP6.78□□□□□ -1.32
CTNND1-216ENST00000527467 LRCH4O75427 683 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 IGHEP01854 428 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 LCATP04180 440 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 CST2P09228 141 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 SNHG28P0DPA3 235 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 SLC25A6P12236 298 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 GABRR1P24046 479 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 HTR4Q13639 388 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.78□□□□□ -1.32
CTNND1-216ENST00000527467 RAB6CQ53S08 254 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 CTSL3PQ5NE16 218 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 PRR27Q6MZM9 219 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 LPCAT3Q6P1A2 487 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 ZNF620Q6ZNG0 422 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 FA2HQ7L5A8 372 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 MRPL21Q7Z2W9 205 aaKnown RBP6.78□□□□□ -1.32
CTNND1-216ENST00000527467 GRAMD2AQ8IUY3 354 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 PGBD5Q8N414 524 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 OR5AR1Q8NGP9 310 aa6.78□□□□□ -1.32
CTNND1-216ENST00000527467 DTD1Q8TEA8 209 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms