RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 HMGN2P46Q86SG4 172 aa11.83□□□□□ -0.52
CAPN1-207ENST00000527189 UBE2J2Q8N2K1 259 aa11.83□□□□□ -0.52
CAPN1-207ENST00000527189 GTF2H4Q92759 462 aa11.83□□□□□ -0.52
CAPN1-207ENST00000527189 SLC35B4Q969S0 331 aa11.83□□□□□ -0.52
CAPN1-207ENST00000527189 TRMT61AQ96FX7 289 aaKnown RBP11.83□□□□□ -0.52
CAPN1-207ENST00000527189 MUS81Q96NY9 551 aa11.83□□□□□ -0.52
CAPN1-207ENST00000527189 MDFIQ99750 246 aa11.83□□□□□ -0.52
CAPN1-207ENST00000527189 REPIN1Q9BWE0 567 aaKnown RBP11.83□□□□□ -0.52
CAPN1-207ENST00000527189 GRIP2Q9C0E4 1043 aa11.83□□□□□ -0.52
CAPN1-207ENST00000527189 CACYBPQ9HB71 228 aaKnown RBP11.83□□□□□ -0.52
CAPN1-207ENST00000527189 TMEM45AQ9NWC5 275 aa11.83□□□□□ -0.52
CAPN1-207ENST00000527189 MALT1Q9UDY8 824 aa11.83□□□□□ -0.52
CAPN1-207ENST00000527189 ADAM21Q9UKJ8 722 aa11.83□□□□□ -0.52
CAPN1-207ENST00000527189 TMEM72A0PK05 275 aa11.82□□□□□ -0.52
CAPN1-207ENST00000527189 DPRXA6NFQ7 191 aa11.82□□□□□ -0.52
CAPN1-207ENST00000527189 H7C1Q1 480 aa11.82□□□□□ -0.52
CAPN1-207ENST00000527189 CLOCKO15516 846 aa11.82□□□□□ -0.52
CAPN1-207ENST00000527189 DANCRP0C864 163 aa11.82□□□□□ -0.52
CAPN1-207ENST00000527189 IMPDH2P12268 514 aa11.82□□□□□ -0.52
CAPN1-207ENST00000527189 BMP2P12643 396 aa11.82□□□□□ -0.52
CAPN1-207ENST00000527189 CCNA2P20248 432 aa11.82□□□□□ -0.52
CAPN1-207ENST00000527189 CXCR1P25024 350 aa11.82□□□□□ -0.52
CAPN1-207ENST00000527189 EDNRAP25101 427 aa11.82□□□□□ -0.52
CAPN1-207ENST00000527189 ACAA2P42765 397 aaKnown RBP11.82□□□□□ -0.52
CAPN1-207ENST00000527189 BSPH1Q075Z2 132 aa11.82□□□□□ -0.52
CAPN1-207ENST00000527189 FADDQ13158 208 aa11.82□□□□□ -0.52
CAPN1-207ENST00000527189 SLC17A1Q14916 467 aa11.82□□□□□ -0.52
CAPN1-207ENST00000527189 STK11Q15831 433 aa11.82□□□□□ -0.52
CAPN1-207ENST00000527189 C6orf10Q5SRN2 563 aa11.82□□□□□ -0.52
CAPN1-207ENST00000527189 ZNF771Q7L3S4 317 aaPredicted RBP11.82□□□□□ -0.52
CAPN1-207ENST00000527189 CCDC103Q8IW40 242 aa11.82□□□□□ -0.52
CAPN1-207ENST00000527189 SMAP2Q8WU79 429 aaPredicted RBP11.82□□□□□ -0.52
CAPN1-207ENST00000527189 SMR3AQ99954 134 aa11.82□□□□□ -0.52
CAPN1-207ENST00000527189 SF3B5Q9BWJ5 86 aaKnown RBP11.82□□□□□ -0.52
CAPN1-207ENST00000527189 SPATA9Q9BWV2 254 aa11.82□□□□□ -0.52
CAPN1-207ENST00000527189 TRIM2Q9C040 744 aa11.82□□□□□ -0.52
CAPN1-207ENST00000527189 BCL2L10Q9HD36 194 aa11.82□□□□□ -0.52
CAPN1-207ENST00000527189 RLIMQ9NVW2 624 aa11.82□□□□□ -0.52
CAPN1-207ENST00000527189 TAS2R16Q9NYV7 291 aa11.82□□□□□ -0.52
CAPN1-207ENST00000527189 MGAT4BQ9UQ53 548 aa11.82□□□□□ -0.52
CAPN1-207ENST00000527189 LAMP3Q9UQV4 416 aa11.82□□□□□ -0.52
CAPN1-207ENST00000527189 SLC9A8Q9Y2E8 581 aa11.82□□□□□ -0.52
CAPN1-207ENST00000527189 PCDHB14Q9Y5E9 798 aa11.82□□□□□ -0.52
CAPN1-207ENST00000527189 A0A096LPI6 279 aa11.81□□□□□ -0.52
CAPN1-207ENST00000527189 CIB4A0PJX0 185 aa11.81□□□□□ -0.52
CAPN1-207ENST00000527189 CCT8L1PA6NM43 557 aa11.81□□□□□ -0.52
CAPN1-207ENST00000527189 A8MVM7 634 aa11.81□□□□□ -0.52
CAPN1-207ENST00000527189 CLIC1O00299 241 aa11.81□□□□□ -0.52
CAPN1-207ENST00000527189 VAMP5O95183 116 aa11.81□□□□□ -0.52
CAPN1-207ENST00000527189 BCHEP06276 602 aa11.81□□□□□ -0.52
CAPN1-207ENST00000527189 GPIP06744 558 aa11.81□□□□□ -0.52
CAPN1-207ENST00000527189 NTF4P34130 210 aa11.81□□□□□ -0.52
CAPN1-207ENST00000527189 IDUAP35475 653 aa11.81□□□□□ -0.52
CAPN1-207ENST00000527189 ATP5J2P56134 94 aa11.81□□□□□ -0.52
CAPN1-207ENST00000527189 STX1BP61266 288 aa11.81□□□□□ -0.52
CAPN1-207ENST00000527189 RGNQ15493 299 aa11.81□□□□□ -0.52
CAPN1-207ENST00000527189 TTMPQ5BVD1 217 aa11.81□□□□□ -0.52
CAPN1-207ENST00000527189 TMEM108Q6UXF1 575 aa11.81□□□□□ -0.52
CAPN1-207ENST00000527189 ZNF836Q6ZNA1 936 aa11.81□□□□□ -0.52
CAPN1-207ENST00000527189 VRK2Q86Y07 508 aa11.81□□□□□ -0.52
CAPN1-207ENST00000527189 OR9I1Q8NGQ6 314 aa11.81□□□□□ -0.52
CAPN1-207ENST00000527189 LRRC8CQ8TDW0 803 aa11.81□□□□□ -0.52
CAPN1-207ENST00000527189 GTPBP3Q969Y2 492 aaKnown RBP11.81□□□□□ -0.52
CAPN1-207ENST00000527189 VPS33AQ96AX1 596 aa11.81□□□□□ -0.52
CAPN1-207ENST00000527189 TMEM45BQ96B21 275 aa11.81□□□□□ -0.52
CAPN1-207ENST00000527189 TMEM19Q96HH6 336 aa11.81□□□□□ -0.52
CAPN1-207ENST00000527189 CCDC28BQ9BUN5 200 aa11.81□□□□□ -0.52
CAPN1-207ENST00000527189 PAIP1Q9H074 479 aaKnown RBP11.81□□□□□ -0.52
CAPN1-207ENST00000527189 A4GALTQ9NPC4 353 aa11.81□□□□□ -0.52
CAPN1-207ENST00000527189 TCF7L2Q9NQB0 619 aa11.81□□□□□ -0.52
CAPN1-207ENST00000527189 FAIMQ9NVQ4 179 aa11.81□□□□□ -0.52
CAPN1-207ENST00000527189 DCTN4Q9UJW0 460 aa11.81□□□□□ -0.52
CAPN1-207ENST00000527189 ZNF443Q9Y2A4 671 aaPredicted RBP11.81□□□□□ -0.52
CAPN1-207ENST00000527189 FLVCR1Q9Y5Y0 555 aa11.81□□□□□ -0.52
CAPN1-207ENST00000527189 GMEB1Q9Y692 573 aa11.81□□□□□ -0.52
CAPN1-207ENST00000527189 MXRA5Q9NR99 2828 aa11.8□□□□□ -0.52
CAPN1-207ENST00000527189 A0A1W2PP18 115 aa11.8□□□□□ -0.52
CAPN1-207ENST00000527189 LIPT2A6NK58 231 aa11.8□□□□□ -0.52
CAPN1-207ENST00000527189 PDLIM1O00151 329 aa11.8□□□□□ -0.52
CAPN1-207ENST00000527189 RAMP1O60894 148 aa11.8□□□□□ -0.52
CAPN1-207ENST00000527189 LY6G6DO95868 133 aa11.8□□□□□ -0.52
CAPN1-207ENST00000527189 SOD3P08294 240 aa11.8□□□□□ -0.52
CAPN1-207ENST00000527189 GKN3PP0CG01 181 aa11.8□□□□□ -0.52
CAPN1-207ENST00000527189 PTAFRP25105 342 aa11.8□□□□□ -0.52
CAPN1-207ENST00000527189 TGFBR3Q03167 851 aa11.8□□□□□ -0.52
CAPN1-207ENST00000527189 FAPQ12884 760 aa11.8□□□□□ -0.52
CAPN1-207ENST00000527189 GABRA6Q16445 453 aa11.8□□□□□ -0.52
CAPN1-207ENST00000527189 LRIF1Q5T3J3 769 aa11.8□□□□□ -0.52
CAPN1-207ENST00000527189 BLOC1S3Q6QNY0 202 aa11.8□□□□□ -0.52
CAPN1-207ENST00000527189 KLHL17Q6TDP4 642 aa11.8□□□□□ -0.52
CAPN1-207ENST00000527189 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.8□□□□□ -0.52
CAPN1-207ENST00000527189 CIARTQ8N365 385 aaPredicted RBP11.8□□□□□ -0.52
CAPN1-207ENST00000527189 C17orf78Q8N4C9 275 aa11.8□□□□□ -0.52
CAPN1-207ENST00000527189 C1orf162Q8NEQ5 155 aaPredicted RBP11.8□□□□□ -0.52
CAPN1-207ENST00000527189 BBS10Q8TAM1 723 aa11.8□□□□□ -0.52
CAPN1-207ENST00000527189 DYDC1Q8WWB3 177 aa11.8□□□□□ -0.52
CAPN1-207ENST00000527189 BOD1Q96IK1 185 aa11.8□□□□□ -0.52
CAPN1-207ENST00000527189 AMBRA1Q9C0C7 1298 aa11.8□□□□□ -0.52
CAPN1-207ENST00000527189 CISD1Q9NZ45 108 aaKnown RBP11.8□□□□□ -0.52
CAPN1-207ENST00000527189 UPB1Q9UBR1 384 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms