RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 OR4C15Q8NGM1 316 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 MBD3L2Q8NHZ7 208 aaPredicted RBP9.63□□□□□ -0.87
NEDD8-205ENST00000527046 FNDC9Q8TBE3 224 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 SLC7A13Q8TCU3 470 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 SLC25A43Q8WUT9 341 aaPredicted RBP9.63□□□□□ -0.87
NEDD8-205ENST00000527046 MCUR1Q96AQ8 359 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 MOGAT1Q96PD6 335 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 OR5B2Q96R09 309 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 TRIB1Q96RU8 372 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 TMEM43Q9BTV4 400 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 POLR2J2Q9GZM3 115 aaKnown RBP9.63□□□□□ -0.87
NEDD8-205ENST00000527046 POLR2J3Q9H1A7 115 aaKnown RBP9.63□□□□□ -0.87
NEDD8-205ENST00000527046 MAGIXQ9H6Y5 334 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 RNF122Q9H9V4 155 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 SERINC1Q9NRX5 453 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 SEC14L4Q9UDX3 406 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 SH3BGRL2Q9UJC5 107 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 HDGFL3Q9Y3E1 203 aa9.63□□□□□ -0.87
NEDD8-205ENST00000527046 TRBV4-1A0A0J9YWV2 114 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 A0A1W2PRQ8 180 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 ELOA3DA6NLF2 546 aaPredicted RBP9.62□□□□□ -0.87
NEDD8-205ENST00000527046 H0Y3Z8 333 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 J3QKU1 62 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 SULT2B1O00204 365 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 CCL21O00585 134 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 PIP5K1CO60331 668 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 GMNNO75496 209 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 RCBTB2O95199 551 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 UMPSP11172 480 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 NQO1P15559 274 aaKnown RBP9.62□□□□□ -0.87
NEDD8-205ENST00000527046 FPR1P21462 350 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 FKBP2P26885 142 aaKnown RBP9.62□□□□□ -0.87
NEDD8-205ENST00000527046 PTGER4P35408 488 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 TIMP3P35625 211 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 RPS5P46782 204 aaKnown RBP9.62□□□□□ -0.87
NEDD8-205ENST00000527046 EIF1AXP47813 144 aaKnown RBP9.62□□□□□ -0.87
NEDD8-205ENST00000527046 TAS2R41P59536 307 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 ACTR3P61158 418 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 RBPJQ06330 500 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 PMPCAQ10713 525 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 ST3GAL3Q11203 375 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 DGCR6Q14129 220 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 PON3Q15166 354 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 ELOA3BQ3SY89 546 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 SLC46A3Q7Z3Q1 461 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 TMEM179BQ7Z7N9 219 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 FJX1Q86VR8 437 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 ATCAYQ86WG3 371 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 ZDHHC21Q8IVQ6 265 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 CCDC103Q8IW40 242 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 WDFY1Q8IWB7 410 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 MEIOBQ8N635 442 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 LRRC17Q8N6Y2 441 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 TMEM99Q8N816 258 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 ZIC4Q8N9L1 334 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 ELOA3Q8NG57 546 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 OR6S1Q8NH40 331 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 PFN4Q8NHR9 129 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 MFSD8Q8NHS3 518 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 LIPHQ8WWY8 451 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 WNT2BQ93097 391 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 CCDC120Q96HB5 630 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 MPP4Q96JB8 637 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 PIP5K1AQ99755 562 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 GPA33Q99795 319 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 CHID1Q9BWS9 393 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 DENND2DQ9H6A0 471 aaPredicted RBP9.62□□□□□ -0.87
NEDD8-205ENST00000527046 NTN4Q9HB63 628 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 RPS6KB2Q9UBS0 482 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 PCNX1Q96RV3 2341 aa9.62□□□□□ -0.87
NEDD8-205ENST00000527046 IGHV3-15A0A0B4J1V0 119 aa9.61□□□□□ -0.87
NEDD8-205ENST00000527046 A0A0G2JNJ9 132 aa9.61□□□□□ -0.87
NEDD8-205ENST00000527046 DHRS12A0PJE2 317 aa9.61□□□□□ -0.87
NEDD8-205ENST00000527046 FIGNL2A6NMB9 653 aa9.61□□□□□ -0.87
NEDD8-205ENST00000527046 ZNF716A6NP11 495 aa9.61□□□□□ -0.87
NEDD8-205ENST00000527046 MS4A18H0YCH9 400 aa9.61□□□□□ -0.87
NEDD8-205ENST00000527046 H3BNX3 289 aa9.61□□□□□ -0.87
NEDD8-205ENST00000527046 KLF4O43474 513 aa9.61□□□□□ -0.87
NEDD8-205ENST00000527046 TNFSF13O75888 250 aa9.61□□□□□ -0.87
NEDD8-205ENST00000527046 AKR7A3O95154 331 aa9.61□□□□□ -0.87
NEDD8-205ENST00000527046 HPRP00739 348 aa9.61□□□□□ -0.87
NEDD8-205ENST00000527046 FABP3P05413 133 aa9.61□□□□□ -0.87
NEDD8-205ENST00000527046 TSPAN19P0C672 248 aa9.61□□□□□ -0.87
NEDD8-205ENST00000527046 RAP2AP10114 183 aa9.61□□□□□ -0.87
NEDD8-205ENST00000527046 TFPIP10646 304 aa9.61□□□□□ -0.87
NEDD8-205ENST00000527046 ZNF26P17031 533 aaPredicted RBP9.61□□□□□ -0.87
NEDD8-205ENST00000527046 FUT1P19526 365 aa9.61□□□□□ -0.87
NEDD8-205ENST00000527046 MAKP20794 623 aa9.61□□□□□ -0.87
NEDD8-205ENST00000527046 EDNRAP25101 427 aa9.61□□□□□ -0.87
NEDD8-205ENST00000527046 GCKP35557 465 aa9.61□□□□□ -0.87
NEDD8-205ENST00000527046 RBM34P42696 430 aaKnown RBP9.61□□□□□ -0.87
NEDD8-205ENST00000527046 KIR2DL2P43627 348 aaPredicted RBP9.61□□□□□ -0.87
NEDD8-205ENST00000527046 FOXD4Q12950 439 aaPredicted RBP9.61□□□□□ -0.87
NEDD8-205ENST00000527046 PPP1R8Q12972 351 aaKnown RBP9.61□□□□□ -0.87
NEDD8-205ENST00000527046 MS4A18Q3C1V0 323 aa9.61□□□□□ -0.87
NEDD8-205ENST00000527046 ZNF770Q6IQ21 691 aaPredicted RBP9.61□□□□□ -0.87
NEDD8-205ENST00000527046 PODNL1Q6PEZ8 512 aa9.61□□□□□ -0.87
NEDD8-205ENST00000527046 B3GNT6Q6ZMB0 384 aa9.61□□□□□ -0.87
NEDD8-205ENST00000527046 MEX3DQ86XN8 651 aaKnown RBP9.61□□□□□ -0.87
NEDD8-205ENST00000527046 RNF128Q8TEB7 428 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms