RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 OR52J3Q8NH60 311 aa14.83□□□□□ -0.04
CAPN1-205ENST00000526954 OR10D3Q8NH80 312 aa14.83□□□□□ -0.04
CAPN1-205ENST00000526954 MFSD8Q8NHS3 518 aa14.83□□□□□ -0.04
CAPN1-205ENST00000526954 OSTF1Q92882 214 aa14.83□□□□□ -0.04
CAPN1-205ENST00000526954 KTI12Q96EK9 354 aaPredicted RBP14.83□□□□□ -0.04
CAPN1-205ENST00000526954 ALPK1Q96QP1 1244 aa14.83□□□□□ -0.04
CAPN1-205ENST00000526954 UCN2Q96RP3 112 aa14.83□□□□□ -0.04
CAPN1-205ENST00000526954 TUBA1CQ9BQE3 449 aa14.83□□□□□ -0.04
CAPN1-205ENST00000526954 KLHL4Q9C0H6 718 aa14.83□□□□□ -0.04
CAPN1-205ENST00000526954 REEP1Q9H902 201 aa14.83□□□□□ -0.04
CAPN1-205ENST00000526954 MED31Q9Y3C7 131 aa14.83□□□□□ -0.04
CAPN1-205ENST00000526954 ARHGAP21Q5T5U3 1957 aa14.82□□□□□ -0.04
CAPN1-205ENST00000526954 TRBV4-1A0A0J9YWV2 114 aa14.82□□□□□ -0.04
CAPN1-205ENST00000526954 SH3PXD2BA1X283 911 aa14.82□□□□□ -0.04
CAPN1-205ENST00000526954 LIPT2A6NK58 231 aa14.82□□□□□ -0.04
CAPN1-205ENST00000526954 FIGNL2A6NMB9 653 aa14.82□□□□□ -0.04
CAPN1-205ENST00000526954 FTCDNL1E5RQL4 147 aa14.82□□□□□ -0.04
CAPN1-205ENST00000526954 SULT2B1O00204 365 aa14.82□□□□□ -0.04
CAPN1-205ENST00000526954 TNFRSF11BO00300 401 aa14.82□□□□□ -0.04
CAPN1-205ENST00000526954 DNPH1O43598 174 aa14.82□□□□□ -0.04
CAPN1-205ENST00000526954 TPOP07202 933 aa14.82□□□□□ -0.04
CAPN1-205ENST00000526954 FASP25445 335 aa14.82□□□□□ -0.04
CAPN1-205ENST00000526954 RPS5P46782 204 aaKnown RBP14.82□□□□□ -0.04
CAPN1-205ENST00000526954 EIF1AXP47813 144 aaKnown RBP14.82□□□□□ -0.04
CAPN1-205ENST00000526954 CARD18P57730 90 aa14.82□□□□□ -0.04
CAPN1-205ENST00000526954 ELF3P78545 371 aaPredicted RBP14.82□□□□□ -0.04
CAPN1-205ENST00000526954 PRKCDQ05655 676 aa14.82□□□□□ -0.04
CAPN1-205ENST00000526954 FOXD4Q12950 439 aaPredicted RBP14.82□□□□□ -0.04
CAPN1-205ENST00000526954 SEC23BQ15437 767 aa14.82□□□□□ -0.04
CAPN1-205ENST00000526954 ATP6AP1Q15904 470 aa14.82□□□□□ -0.04
CAPN1-205ENST00000526954 FAM69AQ5T7M9 428 aa14.82□□□□□ -0.04
CAPN1-205ENST00000526954 TBPL2Q6SJ96 375 aa14.82□□□□□ -0.04
CAPN1-205ENST00000526954 ZNF730Q6ZMV8 503 aa14.82□□□□□ -0.04
CAPN1-205ENST00000526954 CD163Q86VB7 1156 aa14.82□□□□□ -0.04
CAPN1-205ENST00000526954 LSRQ86X29 649 aaPredicted RBP14.82□□□□□ -0.04
CAPN1-205ENST00000526954 P3H2Q8IVL5 708 aa14.82□□□□□ -0.04
CAPN1-205ENST00000526954 OR5M9Q8NGP3 310 aa14.82□□□□□ -0.04
CAPN1-205ENST00000526954 TAAR8Q969N4 342 aa14.82□□□□□ -0.04
CAPN1-205ENST00000526954 NTN4Q9HB63 628 aa14.82□□□□□ -0.04
CAPN1-205ENST00000526954 TIGARQ9NQ88 270 aa14.82□□□□□ -0.04
CAPN1-205ENST00000526954 VNN3Q9NY84 501 aa14.82□□□□□ -0.04
CAPN1-205ENST00000526954 RALYQ9UKM9 306 aaKnown RBP14.82□□□□□ -0.04
CAPN1-205ENST00000526954 TMCC3Q9ULS5 477 aa14.82□□□□□ -0.04
CAPN1-205ENST00000526954 SAMHD1Q9Y3Z3 626 aaKnown RBP14.82□□□□□ -0.04
CAPN1-205ENST00000526954 POLEQ07864 2286 aa14.81□□□□□ -0.04
CAPN1-205ENST00000526954 GNGT2O14610 69 aa14.81□□□□□ -0.04
CAPN1-205ENST00000526954 CXCL13O43927 109 aa14.81□□□□□ -0.04
CAPN1-205ENST00000526954 MT-ATP6P00846 226 aa14.81□□□□□ -0.04
CAPN1-205ENST00000526954 LDLRP01130 860 aa14.81□□□□□ -0.04
CAPN1-205ENST00000526954 BGLAPP02818 100 aa14.81□□□□□ -0.04
CAPN1-205ENST00000526954 AGFG1P52594 562 aaKnown RBP14.81□□□□□ -0.04
CAPN1-205ENST00000526954 CTBP2P56545 445 aa14.81□□□□□ -0.04
CAPN1-205ENST00000526954 SLC35A1P78382 337 aa14.81□□□□□ -0.04
CAPN1-205ENST00000526954 MFSD13AQ14CX5 517 aa14.81□□□□□ -0.04
CAPN1-205ENST00000526954 EXOC3L2Q2M3D2 409 aa14.81□□□□□ -0.04
CAPN1-205ENST00000526954 CHMP1BQ7LBR1 199 aa14.81□□□□□ -0.04
CAPN1-205ENST00000526954 RRM2BQ7LG56 351 aa14.81□□□□□ -0.04
CAPN1-205ENST00000526954 DOLPP1Q86YN1 238 aa14.81□□□□□ -0.04
CAPN1-205ENST00000526954 LINC00471Q8N535 108 aa14.81□□□□□ -0.04
CAPN1-205ENST00000526954 OR4K5Q8NGD3 323 aa14.81□□□□□ -0.04
CAPN1-205ENST00000526954 PFN4Q8NHR9 129 aa14.81□□□□□ -0.04
CAPN1-205ENST00000526954 LIPHQ8WWY8 451 aa14.81□□□□□ -0.04
CAPN1-205ENST00000526954 LRTOMTQ8WZ04 291 aa14.81□□□□□ -0.04
CAPN1-205ENST00000526954 STMN2Q93045 179 aa14.81□□□□□ -0.04
CAPN1-205ENST00000526954 RELTQ969Z4 430 aa14.81□□□□□ -0.04
CAPN1-205ENST00000526954 CPNE4Q96A23 557 aaPredicted RBP14.81□□□□□ -0.04
CAPN1-205ENST00000526954 BDH2Q9BUT1 245 aa14.81□□□□□ -0.04
CAPN1-205ENST00000526954 TAPBPLQ9BX59 468 aa14.81□□□□□ -0.04
CAPN1-205ENST00000526954 TP63Q9H3D4 680 aaPredicted RBP14.81□□□□□ -0.04
CAPN1-205ENST00000526954 CALHM2Q9HA72 323 aa14.81□□□□□ -0.04
CAPN1-205ENST00000526954 PHF3Q92576 2039 aaKnown RBP14.81□□□□□ -0.04
CAPN1-205ENST00000526954 SMG1Q96Q15 3661 aaKnown RBP14.8□□□□□ -0.04
CAPN1-205ENST00000526954 CLCA1A8K7I4 914 aa14.8□□□□□ -0.04
CAPN1-205ENST00000526954 KPNA4O00629 521 aaPredicted RBP14.8□□□□□ -0.04
CAPN1-205ENST00000526954 EIF1BO60739 113 aaKnown RBP14.8□□□□□ -0.04
CAPN1-205ENST00000526954 PTNP21246 168 aa14.8□□□□□ -0.04
CAPN1-205ENST00000526954 FPR1P21462 350 aa14.8□□□□□ -0.04
CAPN1-205ENST00000526954 ACVR2AP27037 513 aa14.8□□□□□ -0.04
CAPN1-205ENST00000526954 DNAJA1P31689 397 aaKnown RBP14.8□□□□□ -0.04
CAPN1-205ENST00000526954 OR2B6P58173 313 aa14.8□□□□□ -0.04
CAPN1-205ENST00000526954 LSM11P83369 360 aaKnown RBP eCLIP14.8□□□□□ -0.04
CAPN1-205ENST00000526954 H3F3AP84243 136 aa14.8□□□□□ -0.04
CAPN1-205ENST00000526954 LTBQ06643 244 aa14.8□□□□□ -0.04
CAPN1-205ENST00000526954 SGCBQ16585 318 aa14.8□□□□□ -0.04
CAPN1-205ENST00000526954 ZNF74Q16587 644 aa14.8□□□□□ -0.04
CAPN1-205ENST00000526954 MICAQ29983 383 aa14.8□□□□□ -0.04
CAPN1-205ENST00000526954 ACSF3Q4G176 576 aaPredicted RBP14.8□□□□□ -0.04
CAPN1-205ENST00000526954 HMBOX1Q6NT76 420 aa14.8□□□□□ -0.04
CAPN1-205ENST00000526954 ZNF585AQ6P3V2 769 aa14.8□□□□□ -0.04
CAPN1-205ENST00000526954 TMPRSS11FQ6ZWK6 438 aa14.8□□□□□ -0.04
CAPN1-205ENST00000526954 NRMQ8IXM6 262 aa14.8□□□□□ -0.04
CAPN1-205ENST00000526954 NRBF2Q96F24 287 aa14.8□□□□□ -0.04
CAPN1-205ENST00000526954 ZNF845Q96IR2 970 aaPredicted RBP14.8□□□□□ -0.04
CAPN1-205ENST00000526954 SRXN1Q9BYN0 137 aa14.8□□□□□ -0.04
CAPN1-205ENST00000526954 C20orf141Q9NUB4 165 aa14.8□□□□□ -0.04
CAPN1-205ENST00000526954 ALKBH4Q9NXW9 302 aa14.8□□□□□ -0.04
CAPN1-205ENST00000526954 CLCF1Q9UBD9 225 aa14.8□□□□□ -0.04
CAPN1-205ENST00000526954 ZNF175Q9Y473 711 aa14.8□□□□□ -0.04
CAPN1-205ENST00000526954 U3KQV3 271 aa14.8□□□□□ -0.04
CAPN1-205ENST00000526954 ARRDC5A6NEK1 342 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms