RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 TRAPPC13A5PLN9 417 aa11.57□□□□□ -0.56
SMPD1-202ENST00000526280 PDE5AO76074 875 aa11.57□□□□□ -0.56
SMPD1-202ENST00000526280 LYPD3O95274 346 aa11.57□□□□□ -0.56
SMPD1-202ENST00000526280 THY1P04216 161 aa11.57□□□□□ -0.56
SMPD1-202ENST00000526280 TMIGD3P0DMS9 266 aaPredicted RBP11.57□□□□□ -0.56
SMPD1-202ENST00000526280 IMPDH2P12268 514 aa11.57□□□□□ -0.56
SMPD1-202ENST00000526280 FCGR2AP12318 317 aa11.57□□□□□ -0.56
SMPD1-202ENST00000526280 CTSSP25774 331 aa11.57□□□□□ -0.56
SMPD1-202ENST00000526280 EGR4Q05215 589 aa11.57□□□□□ -0.56
SMPD1-202ENST00000526280 TRIM25Q14258 630 aaKnown RBP11.57□□□□□ -0.56
SMPD1-202ENST00000526280 IFI44LQ53G44 452 aa11.57□□□□□ -0.56
SMPD1-202ENST00000526280 OR2A2Q6IF42 318 aa11.57□□□□□ -0.56
SMPD1-202ENST00000526280 DEF8Q6ZN54 512 aa11.57□□□□□ -0.56
SMPD1-202ENST00000526280 LIX1LQ8IVB5 337 aa11.57□□□□□ -0.56
SMPD1-202ENST00000526280 ROBO4Q8WZ75 1007 aa11.57□□□□□ -0.56
SMPD1-202ENST00000526280 INTS12Q96CB8 462 aaKnown RBP11.57□□□□□ -0.56
SMPD1-202ENST00000526280 CLPTM1LQ96KA5 538 aa11.57□□□□□ -0.56
SMPD1-202ENST00000526280 NSMCE2Q96MF7 247 aa11.57□□□□□ -0.56
SMPD1-202ENST00000526280 PRRG4Q9BZD6 226 aa11.57□□□□□ -0.56
SMPD1-202ENST00000526280 AMBRA1Q9C0C7 1298 aa11.57□□□□□ -0.56
SMPD1-202ENST00000526280 POLR2J2Q9GZM3 115 aaKnown RBP11.57□□□□□ -0.56
SMPD1-202ENST00000526280 POLR2J3Q9H1A7 115 aaKnown RBP11.57□□□□□ -0.56
SMPD1-202ENST00000526280 MUC13Q9H3R2 512 aa11.57□□□□□ -0.56
SMPD1-202ENST00000526280 ACTR3BQ9P1U1 418 aa11.57□□□□□ -0.56
SMPD1-202ENST00000526280 SAMD4AQ9UPU9 718 aaKnown RBP11.57□□□□□ -0.56
SMPD1-202ENST00000526280 DOPEY2Q9Y3R5 2298 aa11.56□□□□□ -0.56
SMPD1-202ENST00000526280 IGKV1D-42A0A075B6H8 117 aa11.56□□□□□ -0.56
SMPD1-202ENST00000526280 LIPT2A6NK58 231 aa11.56□□□□□ -0.56
SMPD1-202ENST00000526280 DNPH1O43598 174 aa11.56□□□□□ -0.56
SMPD1-202ENST00000526280 CHP2O43745 196 aa11.56□□□□□ -0.56
SMPD1-202ENST00000526280 PRKD3O94806 890 aa11.56□□□□□ -0.56
SMPD1-202ENST00000526280 IL18BPO95998 194 aa11.56□□□□□ -0.56
SMPD1-202ENST00000526280 IFNW1P05000 195 aa11.56□□□□□ -0.56
SMPD1-202ENST00000526280 CRHP06850 196 aa11.56□□□□□ -0.56
SMPD1-202ENST00000526280 ENPP1P22413 925 aa11.56□□□□□ -0.56
SMPD1-202ENST00000526280 AGFG1P52594 562 aaKnown RBP11.56□□□□□ -0.56
SMPD1-202ENST00000526280 TAS2R41P59536 307 aa11.56□□□□□ -0.56
SMPD1-202ENST00000526280 SLC35A1P78382 337 aa11.56□□□□□ -0.56
SMPD1-202ENST00000526280 MS4A2Q01362 244 aa11.56□□□□□ -0.56
SMPD1-202ENST00000526280 FOXF2Q12947 444 aa11.56□□□□□ -0.56
SMPD1-202ENST00000526280 PIN1Q13526 163 aaPredicted RBP11.56□□□□□ -0.56
SMPD1-202ENST00000526280 CDSNQ15517 529 aa11.56□□□□□ -0.56
SMPD1-202ENST00000526280 C1orf140Q5VVS0 124 aa11.56□□□□□ -0.56
SMPD1-202ENST00000526280 GTF2IRD2BQ6EKJ0 949 aa11.56□□□□□ -0.56
SMPD1-202ENST00000526280 PPP4R4Q6NUP7 873 aa11.56□□□□□ -0.56
SMPD1-202ENST00000526280 PGM2L1Q6PCE3 622 aa11.56□□□□□ -0.56
SMPD1-202ENST00000526280 C5orf46Q6UWT4 87 aa11.56□□□□□ -0.56
SMPD1-202ENST00000526280 FCRLAQ7L513 359 aa11.56□□□□□ -0.56
SMPD1-202ENST00000526280 GDF7Q7Z4P5 450 aa11.56□□□□□ -0.56
SMPD1-202ENST00000526280 GTF2IRD2Q86UP8 949 aa11.56□□□□□ -0.56
SMPD1-202ENST00000526280 GCNT2Q8N0V5 402 aa11.56□□□□□ -0.56
SMPD1-202ENST00000526280 FAM86B1Q8N7N1 296 aa11.56□□□□□ -0.56
SMPD1-202ENST00000526280 RNF217Q8TC41 542 aa11.56□□□□□ -0.56
SMPD1-202ENST00000526280 RNF128Q8TEB7 428 aa11.56□□□□□ -0.56
SMPD1-202ENST00000526280 DNAJA3Q96EY1 480 aa11.56□□□□□ -0.56
SMPD1-202ENST00000526280 SLC41A3Q96GZ6 507 aa11.56□□□□□ -0.56
SMPD1-202ENST00000526280 TMEM43Q9BTV4 400 aa11.56□□□□□ -0.56
SMPD1-202ENST00000526280 ZNF629Q9UEG4 869 aaPredicted RBP11.56□□□□□ -0.56
SMPD1-202ENST00000526280 RIMS3Q9UJD0 308 aa11.56□□□□□ -0.56
SMPD1-202ENST00000526280 SLC7A7Q9UM01 511 aa11.56□□□□□ -0.56
SMPD1-202ENST00000526280 PTPN13Q12923 2485 aa11.55□□□□□ -0.56
SMPD1-202ENST00000526280 SPTAN1Q13813 2472 aaKnown RBP11.55□□□□□ -0.56
SMPD1-202ENST00000526280 USP9YO00507 2555 aaPredicted RBP11.55□□□□□ -0.56
SMPD1-202ENST00000526280 SMAD9O15198 467 aaKnown RBP11.55□□□□□ -0.56
SMPD1-202ENST00000526280 OR5F1O95221 314 aa11.55□□□□□ -0.56
SMPD1-202ENST00000526280 CLDN14O95500 239 aa11.55□□□□□ -0.56
SMPD1-202ENST00000526280 GPIP06744 558 aa11.55□□□□□ -0.56
SMPD1-202ENST00000526280 THRBP10828 461 aa11.55□□□□□ -0.56
SMPD1-202ENST00000526280 KLK2P20151 261 aa11.55□□□□□ -0.56
SMPD1-202ENST00000526280 FPR1P21462 350 aa11.55□□□□□ -0.56
SMPD1-202ENST00000526280 OPRM1P35372 400 aa11.55□□□□□ -0.56
SMPD1-202ENST00000526280 IDUAP35475 653 aa11.55□□□□□ -0.56
SMPD1-202ENST00000526280 OR2B6P58173 313 aa11.55□□□□□ -0.56
SMPD1-202ENST00000526280 H3F3AP84243 136 aa11.55□□□□□ -0.56
SMPD1-202ENST00000526280 GUSBP1Q15486 140 aa11.55□□□□□ -0.56
SMPD1-202ENST00000526280 EEF1A1P5Q5VTE0 462 aa11.55□□□□□ -0.56
SMPD1-202ENST00000526280 CYP2R1Q6VVX0 501 aa11.55□□□□□ -0.56
SMPD1-202ENST00000526280 WDR88Q6ZMY6 472 aa11.55□□□□□ -0.56
SMPD1-202ENST00000526280 TSEN54Q7Z6J9 526 aaKnown RBP11.55□□□□□ -0.56
SMPD1-202ENST00000526280 DHFR2Q86XF0 187 aa11.55□□□□□ -0.56
SMPD1-202ENST00000526280 SLC43A2Q8N370 569 aa11.55□□□□□ -0.56
SMPD1-202ENST00000526280 MFSD8Q8NHS3 518 aa11.55□□□□□ -0.56
SMPD1-202ENST00000526280 CA5BP1Q8WTZ4 195 aa11.55□□□□□ -0.56
SMPD1-202ENST00000526280 STMN2Q93045 179 aa11.55□□□□□ -0.56
SMPD1-202ENST00000526280 ASB9Q96DX5 294 aa11.55□□□□□ -0.56
SMPD1-202ENST00000526280 ZHX1-C8orf76Q96EF9 292 aa11.55□□□□□ -0.56
SMPD1-202ENST00000526280 KTI12Q96EK9 354 aaPredicted RBP11.55□□□□□ -0.56
SMPD1-202ENST00000526280 PYURFQ96I23 114 aa11.55□□□□□ -0.56
SMPD1-202ENST00000526280 GMPPAQ96IJ6 420 aaPredicted RBP11.55□□□□□ -0.56
SMPD1-202ENST00000526280 MPP4Q96JB8 637 aa11.55□□□□□ -0.56
SMPD1-202ENST00000526280 C7orf34Q96L11 122 aa11.55□□□□□ -0.56
SMPD1-202ENST00000526280 PSMG3-AS1Q96PY0 264 aa11.55□□□□□ -0.56
SMPD1-202ENST00000526280 PRSS27Q9BQR3 290 aa11.55□□□□□ -0.56
SMPD1-202ENST00000526280 PTDSS2Q9BVG9 487 aa11.55□□□□□ -0.56
SMPD1-202ENST00000526280 SFXN3Q9BWM7 321 aa11.55□□□□□ -0.56
SMPD1-202ENST00000526280 GLRX2Q9NS18 164 aa11.55□□□□□ -0.56
SMPD1-202ENST00000526280 A4GNTQ9UNA3 340 aa11.55□□□□□ -0.56
SMPD1-202ENST00000526280 ICE1Q9Y2F5 2266 aa11.54□□□□□ -0.56
SMPD1-202ENST00000526280 TRAV36DV7A0A075B6V5 113 aa11.54□□□□□ -0.56
SMPD1-202ENST00000526280 IGHV3-15A0A0B4J1V0 119 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms