RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 NR4A2P43354 598 aa12.44□□□□□ -0.42
CPSF1-201ENST00000526271 P2RY4P51582 365 aa12.44□□□□□ -0.42
CPSF1-201ENST00000526271 CSNK2A1P68400 391 aaPredicted RBP12.44□□□□□ -0.42
CPSF1-201ENST00000526271 SLC17A1Q14916 467 aa12.44□□□□□ -0.42
CPSF1-201ENST00000526271 LSM12Q3MHD2 195 aaKnown RBP12.44□□□□□ -0.42
CPSF1-201ENST00000526271 HIKESHIQ53FT3 197 aa12.44□□□□□ -0.42
CPSF1-201ENST00000526271 HOMEZQ8IX15 550 aa12.44□□□□□ -0.42
CPSF1-201ENST00000526271 FNDC5Q8NAU1 212 aa12.44□□□□□ -0.42
CPSF1-201ENST00000526271 SLC25A43Q8WUT9 341 aaPredicted RBP12.44□□□□□ -0.42
CPSF1-201ENST00000526271 DYDC1Q8WWB3 177 aa12.44□□□□□ -0.42
CPSF1-201ENST00000526271 MOAP1Q96BY2 351 aa12.44□□□□□ -0.42
CPSF1-201ENST00000526271 SLC35G5Q96KT7 338 aa12.44□□□□□ -0.42
CPSF1-201ENST00000526271 FOXN4Q96NZ1 517 aa12.44□□□□□ -0.42
CPSF1-201ENST00000526271 SHARPINQ9H0F6 387 aa12.44□□□□□ -0.42
CPSF1-201ENST00000526271 THAP1Q9NVV9 213 aa12.44□□□□□ -0.42
CPSF1-201ENST00000526271 EMC3Q9P0I2 261 aa12.44□□□□□ -0.42
CPSF1-201ENST00000526271 OSGIN1Q9UJX0 560 aa12.44□□□□□ -0.42
CPSF1-201ENST00000526271 MGAM2Q2M2H8 2515 aa12.43□□□□□ -0.42
CPSF1-201ENST00000526271 IGHV1-18A0A0C4DH31 117 aa12.43□□□□□ -0.42
CPSF1-201ENST00000526271 CFLARO15519 480 aa12.43□□□□□ -0.42
CPSF1-201ENST00000526271 MRPL33O75394 65 aaKnown RBP12.43□□□□□ -0.42
CPSF1-201ENST00000526271 CHEK2O96017 543 aa12.43□□□□□ -0.42
CPSF1-201ENST00000526271 GUSBP08236 651 aa12.43□□□□□ -0.42
CPSF1-201ENST00000526271 PRPS1L1P21108 318 aa12.43□□□□□ -0.42
CPSF1-201ENST00000526271 APOBEC3AP31941 199 aaPredicted RBP12.43□□□□□ -0.42
CPSF1-201ENST00000526271 RPL3P39023 403 aaKnown RBP12.43□□□□□ -0.42
CPSF1-201ENST00000526271 MDH1P40925 334 aaKnown RBP12.43□□□□□ -0.42
CPSF1-201ENST00000526271 CLDN8P56748 225 aa12.43□□□□□ -0.42
CPSF1-201ENST00000526271 OR2B6P58173 313 aa12.43□□□□□ -0.42
CPSF1-201ENST00000526271 GGTLC2Q14390 218 aa12.43□□□□□ -0.42
CPSF1-201ENST00000526271 SAXO2Q658L1 398 aa12.43□□□□□ -0.42
CPSF1-201ENST00000526271 TNFAIP8L2Q6P589 184 aaPredicted RBP12.43□□□□□ -0.42
CPSF1-201ENST00000526271 KLHL17Q6TDP4 642 aa12.43□□□□□ -0.42
CPSF1-201ENST00000526271 CASP12Q6UXS9 341 aa12.43□□□□□ -0.42
CPSF1-201ENST00000526271 EIF3MQ7L2H7 374 aaKnown RBP12.43□□□□□ -0.42
CPSF1-201ENST00000526271 SSX8Q7RTT4 187 aa12.43□□□□□ -0.42
CPSF1-201ENST00000526271 GRINAQ7Z429 371 aa12.43□□□□□ -0.42
CPSF1-201ENST00000526271 ANKRD46Q86W74 232 aa12.43□□□□□ -0.42
CPSF1-201ENST00000526271 PIGXQ8TBF5 258 aa12.43□□□□□ -0.42
CPSF1-201ENST00000526271 LRRC8CQ8TDW0 803 aa12.43□□□□□ -0.42
CPSF1-201ENST00000526271 TMEM234Q8WY98 164 aa12.43□□□□□ -0.42
CPSF1-201ENST00000526271 FBXO17Q96EF6 278 aa12.43□□□□□ -0.42
CPSF1-201ENST00000526271 BOD1Q96IK1 185 aa12.43□□□□□ -0.42
CPSF1-201ENST00000526271 SERINC1Q9NRX5 453 aa12.43□□□□□ -0.42
CPSF1-201ENST00000526271 LPAR3Q9UBY5 353 aa12.43□□□□□ -0.42
CPSF1-201ENST00000526271 DCTN4Q9UJW0 460 aa12.43□□□□□ -0.42
CPSF1-201ENST00000526271 HDGFL3Q9Y3E1 203 aa12.43□□□□□ -0.42
CPSF1-201ENST00000526271 RAP2CQ9Y3L5 183 aa12.43□□□□□ -0.42
CPSF1-201ENST00000526271 TMED7-TICAM2A0A0A6YYA0 188 aa12.42□□□□□ -0.42
CPSF1-201ENST00000526271 LRP5LA4QPB2 252 aa12.42□□□□□ -0.42
CPSF1-201ENST00000526271 HMGN4O00479 90 aa12.42□□□□□ -0.42
CPSF1-201ENST00000526271 DNPH1O43598 174 aa12.42□□□□□ -0.42
CPSF1-201ENST00000526271 SRD5A1P18405 259 aa12.42□□□□□ -0.42
CPSF1-201ENST00000526271 MAPK1P28482 360 aa12.42□□□□□ -0.42
CPSF1-201ENST00000526271 CALCRP30988 508 aa12.42□□□□□ -0.42
CPSF1-201ENST00000526271 IDH2P48735 452 aaKnown RBP12.42□□□□□ -0.42
CPSF1-201ENST00000526271 KCNJ10P78508 379 aa12.42□□□□□ -0.42
CPSF1-201ENST00000526271 ZSWIM7Q19AV6 140 aa12.42□□□□□ -0.42
CPSF1-201ENST00000526271 TMEM99Q8N816 258 aa12.42□□□□□ -0.42
CPSF1-201ENST00000526271 ZNF781Q8N8C0 355 aa12.42□□□□□ -0.42
CPSF1-201ENST00000526271 ANKFN1Q8N957 763 aa12.42□□□□□ -0.42
CPSF1-201ENST00000526271 C1orf162Q8NEQ5 155 aaPredicted RBP12.42□□□□□ -0.42
CPSF1-201ENST00000526271 C3orf49Q96BT1 292 aa12.42□□□□□ -0.42
CPSF1-201ENST00000526271 ROPN1LQ96C74 230 aa12.42□□□□□ -0.42
CPSF1-201ENST00000526271 BPESC1Q9GZL8 116 aa12.42□□□□□ -0.42
CPSF1-201ENST00000526271 SLC38A1Q9H2H9 487 aa12.42□□□□□ -0.42
CPSF1-201ENST00000526271 CCDC134Q9H6E4 229 aa12.42□□□□□ -0.42
CPSF1-201ENST00000526271 EXOSC3Q9NQT5 275 aaKnown RBP12.42□□□□□ -0.42
CPSF1-201ENST00000526271 ATAD3AQ9NVI7 634 aa12.42□□□□□ -0.42
CPSF1-201ENST00000526271 ASIC5Q9NY37 505 aa12.42□□□□□ -0.42
CPSF1-201ENST00000526271 TMEM181Q9P2C4 612 aa12.42□□□□□ -0.42
CPSF1-201ENST00000526271 TRAPPC4Q9Y296 219 aa12.42□□□□□ -0.42
CPSF1-201ENST00000526271 TMED7Q9Y3B3 224 aa12.42□□□□□ -0.42
CPSF1-201ENST00000526271 WDR45Q9Y484 360 aa12.42□□□□□ -0.42
CPSF1-201ENST00000526271 PKD1L1Q8TDX9 2849 aa12.42□□□□□ -0.42
CPSF1-201ENST00000526271 LOC100289279A0A1B0GTE1 492 aa12.41□□□□□ -0.42
CPSF1-201ENST00000526271 ZNF503-AS2A6NEH8 195 aa12.41□□□□□ -0.42
CPSF1-201ENST00000526271 NR5A2O00482 541 aa12.41□□□□□ -0.42
CPSF1-201ENST00000526271 RNASET2O00584 256 aaKnown RBP12.41□□□□□ -0.42
CPSF1-201ENST00000526271 AK1P00568 194 aa12.41□□□□□ -0.42
CPSF1-201ENST00000526271 CHRM4P08173 479 aa12.41□□□□□ -0.42
CPSF1-201ENST00000526271 RPS4Y1P22090 263 aaKnown RBP12.41□□□□□ -0.42
CPSF1-201ENST00000526271 GZMKP49863 264 aa12.41□□□□□ -0.42
CPSF1-201ENST00000526271 RPL14P50914 215 aaKnown RBP12.41□□□□□ -0.42
CPSF1-201ENST00000526271 TUBA1BP68363 451 aa12.41□□□□□ -0.42
CPSF1-201ENST00000526271 TUBA4AP68366 448 aa12.41□□□□□ -0.42
CPSF1-201ENST00000526271 GUCY1A3Q02108 690 aa12.41□□□□□ -0.42
CPSF1-201ENST00000526271 EMX2Q04743 252 aa12.41□□□□□ -0.42
CPSF1-201ENST00000526271 ADIPOQQ15848 244 aa12.41□□□□□ -0.42
CPSF1-201ENST00000526271 SYPL1Q16563 259 aa12.41□□□□□ -0.42
CPSF1-201ENST00000526271 MSMPQ1L6U9 139 aa12.41□□□□□ -0.42
CPSF1-201ENST00000526271 PGS1Q32NB8 556 aa12.41□□□□□ -0.42
CPSF1-201ENST00000526271 OR7E24Q6IFN5 339 aa12.41□□□□□ -0.42
CPSF1-201ENST00000526271 FAM166AQ6J272 317 aa12.41□□□□□ -0.42
CPSF1-201ENST00000526271 TUBA1AQ71U36 451 aa12.41□□□□□ -0.42
CPSF1-201ENST00000526271 ZCCHC24Q8N2G6 241 aaKnown RBP12.41□□□□□ -0.42
CPSF1-201ENST00000526271 C17orf78Q8N4C9 275 aa12.41□□□□□ -0.42
CPSF1-201ENST00000526271 OR8J2Q8NGG1 315 aa12.41□□□□□ -0.42
CPSF1-201ENST00000526271 XAGE5Q8WWM1 108 aa12.41□□□□□ -0.42
CPSF1-201ENST00000526271 TMEM45BQ96B21 275 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 178.4 ms