RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 IDSB3KWA1 339 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 PFKFB2O60825 505 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 PEX11AO75192 247 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 TNFSF13O75888 250 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 MOSP00540 346 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 PCCAP05165 728 aaPredicted RBP2.67□□□□□ -1.98
CD44-215ENST00000525241 TSPY4P0CV99 314 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 TSPY10P0CW01 314 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 PNMTP11086 282 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 IMPDH1P20839 514 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 RFC4P35249 363 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 SOX6P35712 828 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 MAP3K8P41279 467 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 CSNK1DP48730 415 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 SH3BGRP55822 239 aaPredicted RBP2.67□□□□□ -1.98
CD44-215ENST00000525241 DLX1P56177 255 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 MAP2K1Q02750 393 aaPredicted RBP2.67□□□□□ -1.98
CD44-215ENST00000525241 LRRC63Q05C16 580 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 PDK4Q16654 411 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 TPD52L1Q16890 204 aaPredicted RBP2.67□□□□□ -1.98
CD44-215ENST00000525241 BCL7AQ4VC05 210 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 C10orf120Q5SQS8 335 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 BEND3Q5T5X7 828 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 OR2G6Q5TZ20 316 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 CTRB2Q6GPI1 263 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 IGFL3Q6UXB1 125 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 ZNF786Q8N393 782 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 ANKFN1Q8N957 763 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 OR4K14Q8NGD5 310 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 OR6C4Q8NGE1 309 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 PIGCQ92535 297 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 ARPC1AQ92747 370 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 FGF11Q92914 225 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 SEC22AQ96IW7 307 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 TGM7Q96PF1 710 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 P2RY13Q9BPV8 354 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 OR11A1Q9GZK7 315 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 RAB33BQ9H082 229 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 RPH3ALQ9UNE2 315 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 OBSCNQ5VST9 7968 aa2.67□□□□□ -1.98
CD44-215ENST00000525241 RLFQ13129 1914 aa2.66□□□□□ -1.98
CD44-215ENST00000525241 MBLAC1A4D2B0 266 aaPredicted RBP2.66□□□□□ -1.98
CD44-215ENST00000525241 PRRG1O14668 218 aa2.66□□□□□ -1.98
CD44-215ENST00000525241 ANGPT2O15123 496 aa2.66□□□□□ -1.98
CD44-215ENST00000525241 MBTPS2O43462 519 aa2.66□□□□□ -1.98
CD44-215ENST00000525241 SNAI2O43623 268 aa2.66□□□□□ -1.98
CD44-215ENST00000525241 N4BP1O75113 896 aaKnown RBP2.66□□□□□ -1.98
CD44-215ENST00000525241 IQCF3P0C7M6 154 aa2.66□□□□□ -1.98
CD44-215ENST00000525241 ICAM2P13598 275 aa2.66□□□□□ -1.98
CD44-215ENST00000525241 RPS2P15880 293 aaKnown RBP2.66□□□□□ -1.98
CD44-215ENST00000525241 CRISP2P16562 243 aa2.66□□□□□ -1.98
CD44-215ENST00000525241 HNF1AP20823 631 aa2.66□□□□□ -1.98
CD44-215ENST00000525241 KRTAP5-9P26371 169 aa2.66□□□□□ -1.98
CD44-215ENST00000525241 LAP3P28838 519 aa2.66□□□□□ -1.98
CD44-215ENST00000525241 CBX1P83916 185 aa2.66□□□□□ -1.98
CD44-215ENST00000525241 EBI3Q14213 229 aa2.66□□□□□ -1.98
CD44-215ENST00000525241 MESDQ14696 234 aa2.66□□□□□ -1.98
CD44-215ENST00000525241 GPNMBQ14956 572 aa2.66□□□□□ -1.98
CD44-215ENST00000525241 PARP15Q460N3 678 aa2.66□□□□□ -1.98
CD44-215ENST00000525241 TFDP3Q5H9I0 405 aa2.66□□□□□ -1.98
CD44-215ENST00000525241 TTC23Q5W5X9 447 aa2.66□□□□□ -1.98
CD44-215ENST00000525241 TIGD3Q6B0B8 471 aa2.66□□□□□ -1.98
CD44-215ENST00000525241 ZNF571Q7Z3V5 609 aaPredicted RBP2.66□□□□□ -1.98
CD44-215ENST00000525241 ZNF683Q8IZ20 524 aa2.66□□□□□ -1.98
CD44-215ENST00000525241 GPATCH11Q8N954 259 aa2.66□□□□□ -1.98
CD44-215ENST00000525241 TIMD4Q96H15 378 aa2.66□□□□□ -1.98
CD44-215ENST00000525241 SENP8Q96LD8 212 aa2.66□□□□□ -1.98
CD44-215ENST00000525241 RAB18Q9NP72 206 aa2.66□□□□□ -1.98
CD44-215ENST00000525241 PIPOXQ9P0Z9 390 aa2.66□□□□□ -1.98
CD44-215ENST00000525241 RNF14Q9UBS8 474 aa2.66□□□□□ -1.98
CD44-215ENST00000525241 TRAF3IP3Q9Y228 551 aa2.66□□□□□ -1.98
CD44-215ENST00000525241 MEMO1Q9Y316 297 aa2.66□□□□□ -1.98
CD44-215ENST00000525241 IGHV3-64DA0A0J9YX35 117 aa2.65□□□□□ -1.99
CD44-215ENST00000525241 ANKRD63C9JTQ0 380 aa2.65□□□□□ -1.99
CD44-215ENST00000525241 F5H6K3 240 aa2.65□□□□□ -1.99
CD44-215ENST00000525241 HIP1O00291 1037 aa2.65□□□□□ -1.99
CD44-215ENST00000525241 KIAA0754O94854 1291 aa2.65□□□□□ -1.99
CD44-215ENST00000525241 RPA2P15927 270 aa2.65□□□□□ -1.99
CD44-215ENST00000525241 GCAP28676 217 aa2.65□□□□□ -1.99
CD44-215ENST00000525241 CCR6P51684 374 aa2.65□□□□□ -1.99
CD44-215ENST00000525241 KLRC3Q07444 240 aa2.65□□□□□ -1.99
CD44-215ENST00000525241 C6orf89Q6UWU4 347 aa2.65□□□□□ -1.99
CD44-215ENST00000525241 SLC35F2Q8IXU6 374 aa2.65□□□□□ -1.99
CD44-215ENST00000525241 TMEM123Q8N131 208 aa2.65□□□□□ -1.99
CD44-215ENST00000525241 NPBQ8NG41 125 aa2.65□□□□□ -1.99
CD44-215ENST00000525241 OR51G1Q8NGK1 321 aa2.65□□□□□ -1.99
CD44-215ENST00000525241 NDRG1Q92597 394 aaKnown RBP2.65□□□□□ -1.99
CD44-215ENST00000525241 THRSPQ92748 146 aa2.65□□□□□ -1.99
CD44-215ENST00000525241 EFHD2Q96C19 240 aaPredicted RBP2.65□□□□□ -1.99
CD44-215ENST00000525241 FCRL1Q96LA6 429 aa2.65□□□□□ -1.99
CD44-215ENST00000525241 NAT9Q9BTE0 207 aa2.65□□□□□ -1.99
CD44-215ENST00000525241 EML4Q9HC35 981 aaKnown RBP2.65□□□□□ -1.99
CD44-215ENST00000525241 ZNF223Q9UK11 482 aaPredicted RBP2.65□□□□□ -1.99
CD44-215ENST00000525241 COPS3Q9UNS2 423 aa2.65□□□□□ -1.99
CD44-215ENST00000525241 MRPS33Q9Y291 106 aaKnown RBP2.65□□□□□ -1.99
CD44-215ENST00000525241 POLDIP2Q9Y2S7 368 aa2.65□□□□□ -1.99
CD44-215ENST00000525241 AP1M2Q9Y6Q5 423 aa2.65□□□□□ -1.99
CD44-215ENST00000525241 ARID1AO14497 2285 aa2.65□□□□□ -1.99
CD44-215ENST00000525241 A0A0G2JN53 185 aa2.64□□□□□ -1.99
CD44-215ENST00000525241 PES1O00541 588 aaKnown RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms