RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 FOXC2Q99958 501 aa11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 SPATA5L1Q9BVQ7 753 aa11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 HDHD5Q9BXW7 423 aa11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 POTEKPQ9BYX7 375 aa11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 PIF1Q9H611 641 aa11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 TMEM38AQ9H6F2 299 aa11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 ADPRHL2Q9NX46 363 aa11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 RPS6KB2Q9UBS0 482 aa11.37□□□□□ -0.59
TRAPPC4-205ENST00000525079 LIPT2A6NK58 231 aa11.36□□□□□ -0.59
TRAPPC4-205ENST00000525079 A8MVM7 634 aa11.36□□□□□ -0.59
TRAPPC4-205ENST00000525079 GPR171O14626 319 aa11.36□□□□□ -0.59
TRAPPC4-205ENST00000525079 EIF1BO60739 113 aaKnown RBP11.36□□□□□ -0.59
TRAPPC4-205ENST00000525079 MRPL33O75394 65 aaKnown RBP11.36□□□□□ -0.59
TRAPPC4-205ENST00000525079 GPIP06744 558 aa11.36□□□□□ -0.59
TRAPPC4-205ENST00000525079 CD53P19397 219 aa11.36□□□□□ -0.59
TRAPPC4-205ENST00000525079 IGHV1-2P23083 117 aa11.36□□□□□ -0.59
TRAPPC4-205ENST00000525079 HTR2AP28223 471 aa11.36□□□□□ -0.59
TRAPPC4-205ENST00000525079 MAP2K6P52564 334 aa11.36□□□□□ -0.59
TRAPPC4-205ENST00000525079 DMTNQ08495 405 aa11.36□□□□□ -0.59
TRAPPC4-205ENST00000525079 KLF10Q13118 480 aa11.36□□□□□ -0.59
TRAPPC4-205ENST00000525079 P2RY6Q15077 328 aa11.36□□□□□ -0.59
TRAPPC4-205ENST00000525079 TAB1Q15750 504 aa11.36□□□□□ -0.59
TRAPPC4-205ENST00000525079 STK11Q15831 433 aa11.36□□□□□ -0.59
TRAPPC4-205ENST00000525079 DEFB113Q30KQ7 82 aa11.36□□□□□ -0.59
TRAPPC4-205ENST00000525079 BEX5Q5H9J7 111 aa11.36□□□□□ -0.59
TRAPPC4-205ENST00000525079 C1orf140Q5VVS0 124 aa11.36□□□□□ -0.59
TRAPPC4-205ENST00000525079 DHRS4L2Q6PKH6 230 aa11.36□□□□□ -0.59
TRAPPC4-205ENST00000525079 SPNS3Q6ZMD2 512 aa11.36□□□□□ -0.59
TRAPPC4-205ENST00000525079 ATG4DQ86TL0 474 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC4-205ENST00000525079 SMYD1Q8NB12 490 aa11.36□□□□□ -0.59
TRAPPC4-205ENST00000525079 TSPEARQ8WU66 669 aa11.36□□□□□ -0.59
TRAPPC4-205ENST00000525079 APH1AQ96BI3 265 aa11.36□□□□□ -0.59
TRAPPC4-205ENST00000525079 ZNF607Q96SK3 696 aa11.36□□□□□ -0.59
TRAPPC4-205ENST00000525079 WFDC6Q9BQY6 131 aa11.36□□□□□ -0.59
TRAPPC4-205ENST00000525079 TAPBPLQ9BX59 468 aa11.36□□□□□ -0.59
TRAPPC4-205ENST00000525079 OR10A4Q9H209 315 aa11.36□□□□□ -0.59
TRAPPC4-205ENST00000525079 SAR1AQ9NR31 198 aa11.36□□□□□ -0.59
TRAPPC4-205ENST00000525079 ANGPT4Q9Y264 503 aa11.36□□□□□ -0.59
TRAPPC4-205ENST00000525079 AKAP6Q13023 2319 aa11.36□□□□□ -0.59
TRAPPC4-205ENST00000525079 AKAP9Q99996 3911 aa11.36□□□□□ -0.59
TRAPPC4-205ENST00000525079 LOC100653049A0A140TA62 436 aa11.35□□□□□ -0.59
TRAPPC4-205ENST00000525079 A0A1B0GWA3 101 aa11.35□□□□□ -0.59
TRAPPC4-205ENST00000525079 ELOA3DA6NLF2 546 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC4-205ENST00000525079 TMEM229AB2RXF0 380 aa11.35□□□□□ -0.59
TRAPPC4-205ENST00000525079 SERPINB7O75635 380 aa11.35□□□□□ -0.59
TRAPPC4-205ENST00000525079 KRT34O76011 436 aa11.35□□□□□ -0.59
TRAPPC4-205ENST00000525079 MFN2O95140 757 aa11.35□□□□□ -0.59
TRAPPC4-205ENST00000525079 OPN1SWP03999 348 aa11.35□□□□□ -0.59
TRAPPC4-205ENST00000525079 MDH1P40925 334 aaKnown RBP11.35□□□□□ -0.59
TRAPPC4-205ENST00000525079 SLC16A1P53985 500 aa11.35□□□□□ -0.59
TRAPPC4-205ENST00000525079 FOXG1P55316 489 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC4-205ENST00000525079 SLC17A1Q14916 467 aa11.35□□□□□ -0.59
TRAPPC4-205ENST00000525079 ACKR1Q16570 336 aa11.35□□□□□ -0.59
TRAPPC4-205ENST00000525079 ELOA3BQ3SY89 546 aa11.35□□□□□ -0.59
TRAPPC4-205ENST00000525079 FBXW9Q5XUX1 488 aa11.35□□□□□ -0.59
TRAPPC4-205ENST00000525079 PAQR6Q6TCH4 344 aa11.35□□□□□ -0.59
TRAPPC4-205ENST00000525079 CASP12Q6UXS9 341 aa11.35□□□□□ -0.59
TRAPPC4-205ENST00000525079 GPAT4Q86UL3 456 aa11.35□□□□□ -0.59
TRAPPC4-205ENST00000525079 ARMC8Q8IUR7 673 aa11.35□□□□□ -0.59
TRAPPC4-205ENST00000525079 P3H2Q8IVL5 708 aa11.35□□□□□ -0.59
TRAPPC4-205ENST00000525079 C11orf65Q8NCR3 313 aa11.35□□□□□ -0.59
TRAPPC4-205ENST00000525079 ELOA3Q8NG57 546 aa11.35□□□□□ -0.59
TRAPPC4-205ENST00000525079 OR52E4Q8NGH9 312 aa11.35□□□□□ -0.59
TRAPPC4-205ENST00000525079 OR10A6Q8NH74 314 aa11.35□□□□□ -0.59
TRAPPC4-205ENST00000525079 RNF217Q8TC41 542 aa11.35□□□□□ -0.59
TRAPPC4-205ENST00000525079 SLC25A36Q96CQ1 311 aa11.35□□□□□ -0.59
TRAPPC4-205ENST00000525079 CXXC4Q9H2H0 198 aa11.35□□□□□ -0.59
TRAPPC4-205ENST00000525079 KAT8Q9H7Z6 458 aaKnown RBP11.35□□□□□ -0.59
TRAPPC4-205ENST00000525079 MED4Q9NPJ6 270 aa11.35□□□□□ -0.59
TRAPPC4-205ENST00000525079 SLC13A4Q9UKG4 626 aa11.35□□□□□ -0.59
TRAPPC4-205ENST00000525079 PRDM4Q9UKN5 801 aa11.35□□□□□ -0.59
TRAPPC4-205ENST00000525079 FLVCR1Q9Y5Y0 555 aa11.35□□□□□ -0.59
TRAPPC4-205ENST00000525079 PRORSD1PA6NEY8 169 aa11.34□□□□□ -0.59
TRAPPC4-205ENST00000525079 CCT8L1PA6NM43 557 aa11.34□□□□□ -0.59
TRAPPC4-205ENST00000525079 M0QX08 132 aa11.34□□□□□ -0.59
TRAPPC4-205ENST00000525079 MRASO14807 208 aa11.34□□□□□ -0.59
TRAPPC4-205ENST00000525079 RAD51DO75771 328 aa11.34□□□□□ -0.59
TRAPPC4-205ENST00000525079 AHSA1O95433 338 aa11.34□□□□□ -0.59
TRAPPC4-205ENST00000525079 PTNP21246 168 aa11.34□□□□□ -0.59
TRAPPC4-205ENST00000525079 CBLP22681 906 aa11.34□□□□□ -0.59
TRAPPC4-205ENST00000525079 RPS5P46782 204 aaKnown RBP11.34□□□□□ -0.59
TRAPPC4-205ENST00000525079 RGS8P57771 180 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC4-205ENST00000525079 EGR4Q05215 589 aa11.34□□□□□ -0.59
TRAPPC4-205ENST00000525079 FAPQ12884 760 aa11.34□□□□□ -0.59
TRAPPC4-205ENST00000525079 CYLC2Q14093 348 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC4-205ENST00000525079 TRMT5Q32P41 509 aaKnown RBP11.34□□□□□ -0.59
TRAPPC4-205ENST00000525079 MMEL1Q495T6 779 aa11.34□□□□□ -0.59
TRAPPC4-205ENST00000525079 RABL3Q5HYI8 236 aa11.34□□□□□ -0.59
TRAPPC4-205ENST00000525079 C9orf135Q5VTT2 229 aa11.34□□□□□ -0.59
TRAPPC4-205ENST00000525079 REP15Q6BDI9 236 aa11.34□□□□□ -0.59
TRAPPC4-205ENST00000525079 TMEM225Q6GV28 225 aa11.34□□□□□ -0.59
TRAPPC4-205ENST00000525079 NANOGP8Q6NSW7 305 aa11.34□□□□□ -0.59
TRAPPC4-205ENST00000525079 SNX32Q86XE0 403 aa11.34□□□□□ -0.59
TRAPPC4-205ENST00000525079 KDM8Q8N371 416 aa11.34□□□□□ -0.59
TRAPPC4-205ENST00000525079 ZNF433Q8N7K0 673 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC4-205ENST00000525079 ZIC4Q8N9L1 334 aa11.34□□□□□ -0.59
TRAPPC4-205ENST00000525079 OR9K2Q8NGE7 335 aa11.34□□□□□ -0.59
TRAPPC4-205ENST00000525079 STK35Q8TDR2 534 aa11.34□□□□□ -0.59
TRAPPC4-205ENST00000525079 HSD17B8Q92506 261 aa11.34□□□□□ -0.59
TRAPPC4-205ENST00000525079 SLC35B4Q969S0 331 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms