RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 CIB4A0PJX0 185 aa16.39■□□□□ 0.21
CAPN1-203ENST00000525013 CCT8L1PA6NM43 557 aa16.39■□□□□ 0.21
CAPN1-203ENST00000525013 PGM3O95394 542 aa16.39■□□□□ 0.21
CAPN1-203ENST00000525013 GPIP06744 558 aa16.39■□□□□ 0.21
CAPN1-203ENST00000525013 BMP2P12643 396 aa16.39■□□□□ 0.21
CAPN1-203ENST00000525013 HOXB9P17482 250 aaPredicted RBP16.39■□□□□ 0.21
CAPN1-203ENST00000525013 NTF4P34130 210 aa16.39■□□□□ 0.21
CAPN1-203ENST00000525013 IDUAP35475 653 aa16.39■□□□□ 0.21
CAPN1-203ENST00000525013 CEACAM7Q14002 265 aa16.39■□□□□ 0.21
CAPN1-203ENST00000525013 SQLEQ14534 574 aa16.39■□□□□ 0.21
CAPN1-203ENST00000525013 PPA1Q15181 289 aa16.39■□□□□ 0.21
CAPN1-203ENST00000525013 OR7A5Q15622 319 aa16.39■□□□□ 0.21
CAPN1-203ENST00000525013 NCMAPQ5T1S8 102 aa16.39■□□□□ 0.21
CAPN1-203ENST00000525013 LRIF1Q5T3J3 769 aa16.39■□□□□ 0.21
CAPN1-203ENST00000525013 GCNT6Q5T4J0 391 aa16.39■□□□□ 0.21
CAPN1-203ENST00000525013 PRAMEF8Q5VWM4 474 aa16.39■□□□□ 0.21
CAPN1-203ENST00000525013 PRAMEF7Q5VXH5 474 aa16.39■□□□□ 0.21
CAPN1-203ENST00000525013 CASP12Q6UXS9 341 aa16.39■□□□□ 0.21
CAPN1-203ENST00000525013 MSRB3Q8IXL7 192 aa16.39■□□□□ 0.21
CAPN1-203ENST00000525013 ZNF433Q8N7K0 673 aaPredicted RBP16.39■□□□□ 0.21
CAPN1-203ENST00000525013 CKAP2Q8WWK9 683 aa16.39■□□□□ 0.21
CAPN1-203ENST00000525013 DLL4Q9NR61 685 aa16.39■□□□□ 0.21
CAPN1-203ENST00000525013 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.39■□□□□ 0.21
CAPN1-203ENST00000525013 PRDM4Q9UKN5 801 aa16.39■□□□□ 0.21
CAPN1-203ENST00000525013 CHST2Q9Y4C5 530 aa16.39■□□□□ 0.21
CAPN1-203ENST00000525013 FRS3O43559 492 aa16.38■□□□□ 0.21
CAPN1-203ENST00000525013 H2AFXP16104 143 aaPredicted RBP16.38■□□□□ 0.21
CAPN1-203ENST00000525013 COX5AP20674 150 aa16.38■□□□□ 0.21
CAPN1-203ENST00000525013 PPIBP23284 216 aaKnown RBP16.38■□□□□ 0.21
CAPN1-203ENST00000525013 ATP4BP51164 291 aa16.38■□□□□ 0.21
CAPN1-203ENST00000525013 HOXC5Q00444 222 aa16.38■□□□□ 0.21
CAPN1-203ENST00000525013 BSPH1Q075Z2 132 aa16.38■□□□□ 0.21
CAPN1-203ENST00000525013 FAPQ12884 760 aa16.38■□□□□ 0.21
CAPN1-203ENST00000525013 OTUD3Q5T2D3 398 aaPredicted RBP16.38■□□□□ 0.21
CAPN1-203ENST00000525013 PAQR6Q6TCH4 344 aa16.38■□□□□ 0.21
CAPN1-203ENST00000525013 ATG4DQ86TL0 474 aaPredicted RBP16.38■□□□□ 0.21
CAPN1-203ENST00000525013 ZNF611Q8N823 705 aa16.38■□□□□ 0.21
CAPN1-203ENST00000525013 NFKBIDQ8NI38 313 aa16.38■□□□□ 0.21
CAPN1-203ENST00000525013 TAPBPLQ9BX59 468 aa16.38■□□□□ 0.21
CAPN1-203ENST00000525013 GSX1Q9H4S2 264 aaPredicted RBP16.38■□□□□ 0.21
CAPN1-203ENST00000525013 TMEM45AQ9NWC5 275 aa16.38■□□□□ 0.21
CAPN1-203ENST00000525013 PARPBPQ9NWS1 579 aa16.38■□□□□ 0.21
CAPN1-203ENST00000525013 ASB6Q9NWX5 421 aa16.38■□□□□ 0.21
CAPN1-203ENST00000525013 ADPRHL2Q9NX46 363 aa16.38■□□□□ 0.21
CAPN1-203ENST00000525013 VAPAQ9P0L0 249 aa16.38■□□□□ 0.21
CAPN1-203ENST00000525013 DCTN4Q9UJW0 460 aa16.38■□□□□ 0.21
CAPN1-203ENST00000525013 SLC9A8Q9Y2E8 581 aa16.38■□□□□ 0.21
CAPN1-203ENST00000525013 TLN2Q9Y4G6 2542 aa16.38■□□□□ 0.21
CAPN1-203ENST00000525013 LIPT2A6NK58 231 aa16.37■□□□□ 0.21
CAPN1-203ENST00000525013 A8MVM7 634 aa16.37■□□□□ 0.21
CAPN1-203ENST00000525013 EVPLLA8MZ36 301 aa16.37■□□□□ 0.21
CAPN1-203ENST00000525013 RAD51DO75771 328 aa16.37■□□□□ 0.21
CAPN1-203ENST00000525013 AKR7A3O95154 331 aa16.37■□□□□ 0.21
CAPN1-203ENST00000525013 ARAFP10398 606 aa16.37■□□□□ 0.21
CAPN1-203ENST00000525013 IRX1P78414 480 aaPredicted RBP16.37■□□□□ 0.21
CAPN1-203ENST00000525013 TIMM23BQ5SRD1 257 aa16.37■□□□□ 0.21
CAPN1-203ENST00000525013 YTHDF3Q7Z739 585 aaKnown RBP16.37■□□□□ 0.21
CAPN1-203ENST00000525013 P2RY8Q86VZ1 359 aa16.37■□□□□ 0.21
CAPN1-203ENST00000525013 TMEM99Q8N816 258 aa16.37■□□□□ 0.21
CAPN1-203ENST00000525013 C18orf12Q96KH6 178 aa16.37■□□□□ 0.21
CAPN1-203ENST00000525013 RABEP2Q9H5N1 569 aa16.37■□□□□ 0.21
CAPN1-203ENST00000525013 CXorf56Q9H5V9 222 aa16.37■□□□□ 0.21
CAPN1-203ENST00000525013 SLC52A3Q9NQ40 469 aa16.37■□□□□ 0.21
CAPN1-203ENST00000525013 UPB1Q9UBR1 384 aa16.37■□□□□ 0.21
CAPN1-203ENST00000525013 FLVCR1Q9Y5Y0 555 aa16.37■□□□□ 0.21
CAPN1-203ENST00000525013 A0A1W2PP18 115 aa16.36■□□□□ 0.21
CAPN1-203ENST00000525013 DPRXA6NFQ7 191 aa16.36■□□□□ 0.21
CAPN1-203ENST00000525013 OR5H1A6NKK0 313 aa16.36■□□□□ 0.21
CAPN1-203ENST00000525013 ETS2P15036 469 aa16.36■□□□□ 0.21
CAPN1-203ENST00000525013 PTH2RP49190 550 aa16.36■□□□□ 0.21
CAPN1-203ENST00000525013 CDK6Q00534 326 aa16.36■□□□□ 0.21
CAPN1-203ENST00000525013 SLC17A1Q14916 467 aa16.36■□□□□ 0.21
CAPN1-203ENST00000525013 C1orf140Q5VVS0 124 aa16.36■□□□□ 0.21
CAPN1-203ENST00000525013 REEP3Q6NUK4 255 aa16.36■□□□□ 0.21
CAPN1-203ENST00000525013 ADAM5Q6NVV9 412 aa16.36■□□□□ 0.21
CAPN1-203ENST00000525013 SEZ6L2Q6UXD5 910 aa16.36■□□□□ 0.21
CAPN1-203ENST00000525013 GPAT4Q86UL3 456 aa16.36■□□□□ 0.21
CAPN1-203ENST00000525013 KRT73Q86Y46 540 aa16.36■□□□□ 0.21
CAPN1-203ENST00000525013 C10orf111Q8N326 155 aa16.36■□□□□ 0.21
CAPN1-203ENST00000525013 OR52N5Q8NH56 324 aa16.36■□□□□ 0.21
CAPN1-203ENST00000525013 NEUROG1Q92886 237 aa16.36■□□□□ 0.21
CAPN1-203ENST00000525013 FBXW5Q969U6 566 aa16.36■□□□□ 0.21
CAPN1-203ENST00000525013 C3orf49Q96BT1 292 aa16.36■□□□□ 0.21
CAPN1-203ENST00000525013 Q96MF0 132 aa16.36■□□□□ 0.21
CAPN1-203ENST00000525013 NPHS2Q9NP85 383 aa16.36■□□□□ 0.21
CAPN1-203ENST00000525013 TAS2R16Q9NYV7 291 aa16.36■□□□□ 0.21
CAPN1-203ENST00000525013 RPS6KB2Q9UBS0 482 aa16.36■□□□□ 0.21
CAPN1-203ENST00000525013 MALT1Q9UDY8 824 aa16.36■□□□□ 0.21
CAPN1-203ENST00000525013 CORO2BQ9UQ03 480 aa16.36■□□□□ 0.21
CAPN1-203ENST00000525013 LAMP3Q9UQV4 416 aa16.36■□□□□ 0.21
CAPN1-203ENST00000525013 SLC6A2P23975 617 aa16.35■□□□□ 0.21
CAPN1-203ENST00000525013 FOXG1P55316 489 aaPredicted RBP16.35■□□□□ 0.21
CAPN1-203ENST00000525013 C9orf135Q5VTT2 229 aa16.35■□□□□ 0.21
CAPN1-203ENST00000525013 TMEM225Q6GV28 225 aa16.35■□□□□ 0.21
CAPN1-203ENST00000525013 SSX8Q7RTT4 187 aa16.35■□□□□ 0.21
CAPN1-203ENST00000525013 KBTBD8Q8NFY9 601 aa16.35■□□□□ 0.21
CAPN1-203ENST00000525013 OR9K2Q8NGE7 335 aa16.35■□□□□ 0.21
CAPN1-203ENST00000525013 OR52E4Q8NGH9 312 aa16.35■□□□□ 0.21
CAPN1-203ENST00000525013 LILRB1Q8NHL6 650 aaPredicted RBP16.35■□□□□ 0.21
CAPN1-203ENST00000525013 SLC35B4Q969S0 331 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms